RNA–Protein interactions for RNA: ENST00000583704.1

TTC19-210, Transcript of tetratricopeptide repeat domain 19, human

TSL 2

Gene TTC19, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC19-210	ENST00000583704	KCNH5	Q8NCM2	988 aa		31.72	■■■□□ 2.67
TTC19-210	ENST00000583704	CAMKK2	Q96RR4	588 aa		31.72	■■■□□ 2.67
TTC19-210	ENST00000583704	ARHGEF25	Q86VW2	580 aa		31.71	■■■□□ 2.67
TTC19-210	ENST00000583704	CD163L1	Q9NR16	1453 aa		31.7	■■■□□ 2.66
TTC19-210	ENST00000583704	RREB1	Q92766	1687 aa		31.69	■■■□□ 2.66
TTC19-210	ENST00000583704	WDR17	Q8IZU2	1322 aa		31.69	■■■□□ 2.66
TTC19-210	ENST00000583704	PEAK1	Q9H792	1746 aa		31.69	■■■□□ 2.66
TTC19-210	ENST00000583704	R3HDM1	Q15032	1099 aa	Known RBP	31.68	■■■□□ 2.66
TTC19-210	ENST00000583704	PARD3	Q8TEW0	1356 aa		31.68	■■■□□ 2.66
TTC19-210	ENST00000583704	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.67	■■■□□ 2.66	2e-6	■■□□□ 12
TTC19-210	ENST00000583704	USP54	Q70EL1	1684 aa		31.67	■■■□□ 2.66
TTC19-210	ENST00000583704	TMC1	Q8TDI8	760 aa		31.66	■■■□□ 2.66
TTC19-210	ENST00000583704	NUP188	Q5SRE5	1749 aa		31.66	■■■□□ 2.66
TTC19-210	ENST00000583704	OVOS2	A0A0G2JMS6	1433 aa		31.66	■■■□□ 2.66
TTC19-210	ENST00000583704	OVOS2	A0A0J9YW53	1432 aa		31.66	■■■□□ 2.66
TTC19-210	ENST00000583704	OVOS2	Q6IE36	1432 aa		31.66	■■■□□ 2.66
TTC19-210	ENST00000583704	ABCC6	O95255	1503 aa		31.62	■■■□□ 2.65
TTC19-210	ENST00000583704	DDB1	Q16531	1140 aa		31.62	■■■□□ 2.65
TTC19-210	ENST00000583704	SBF2	Q86WG5	1849 aa		31.62	■■■□□ 2.65
TTC19-210	ENST00000583704	USP31	Q70CQ4	1352 aa		31.61	■■■□□ 2.65
TTC19-210	ENST00000583704	CSB-PGBD3	P0DP91	1061 aa		31.61	■■■□□ 2.65
TTC19-210	ENST00000583704	NME9	Q86XW9	330 aa		31.61	■■■□□ 2.65
TTC19-210	ENST00000583704	SLC12A5	Q9H2X9	1139 aa		31.61	■■■□□ 2.65
TTC19-210	ENST00000583704	LTN1	O94822	1766 aa		31.59	■■■□□ 2.65
TTC19-210	ENST00000583704	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.59	■■■□□ 2.65
TTC19-210	ENST00000583704	C11orf95	C9JLR9	678 aa	Predicted RBP	31.58	■■■□□ 2.65
TTC19-210	ENST00000583704	CARD10	Q9BWT7	1032 aa		31.58	■■■□□ 2.65
TTC19-210	ENST00000583704	EDC4	Q6P2E9	1401 aa	Known RBP	31.58	■■■□□ 2.65
TTC19-210	ENST00000583704		A0A1W2PP64	1363 aa		31.57	■■■□□ 2.64
TTC19-210	ENST00000583704	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.55	■■■□□ 2.64
TTC19-210	ENST00000583704	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.53	■■■□□ 2.64
TTC19-210	ENST00000583704	RGPD4	Q7Z3J3	1758 aa		31.53	■■■□□ 2.64
TTC19-210	ENST00000583704	TERF2IP	Q9NYB0	399 aa		31.53	■■■□□ 2.64
TTC19-210	ENST00000583704	ST20-MTHFS	A0A0A6YYL1	179 aa		31.52	■■■□□ 2.64
TTC19-210	ENST00000583704	MARCH10	Q8NA82	808 aa	Predicted RBP	31.52	■■■□□ 2.64
TTC19-210	ENST00000583704	PUS7	Q96PZ0	661 aa	Known RBP	31.52	■■■□□ 2.64
TTC19-210	ENST00000583704	TESK2	Q96S53	571 aa		31.52	■■■□□ 2.64
TTC19-210	ENST00000583704	CCDC7	Q96M83	1385 aa		31.51	■■■□□ 2.63
TTC19-210	ENST00000583704	ERBB3	P21860	1342 aa		31.49	■■■□□ 2.63
TTC19-210	ENST00000583704	NBPF14	Q5TI25	921 aa		31.48	■■■□□ 2.63
TTC19-210	ENST00000583704	PTF1A	Q7RTS3	328 aa		31.48	■■■□□ 2.63
TTC19-210	ENST00000583704	BCL9	O00512	1426 aa		31.47	■■■□□ 2.63
TTC19-210	ENST00000583704	NINL	Q9Y2I6	1382 aa		31.46	■■■□□ 2.63
TTC19-210	ENST00000583704	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.46	■■■□□ 2.63
TTC19-210	ENST00000583704	TNS2	Q63HR2	1409 aa		31.46	■■■□□ 2.63
TTC19-210	ENST00000583704	EXOC5	O00471	708 aa		31.44	■■■□□ 2.62
TTC19-210	ENST00000583704	PLSCR1	O15162	318 aa		31.43	■■■□□ 2.62
TTC19-210	ENST00000583704	PCGF6	Q9BYE7	350 aa		31.43	■■■□□ 2.62
TTC19-210	ENST00000583704	NLRP2	Q9NX02	1062 aa		31.43	■■■□□ 2.62
TTC19-210	ENST00000583704	ANKRD24	Q8TF21	1146 aa		31.41	■■■□□ 2.62
TTC19-210	ENST00000583704	SLC24A1	O60721	1099 aa		31.38	■■■□□ 2.61
TTC19-210	ENST00000583704	USP47	Q96K76	1375 aa		31.38	■■■□□ 2.61
TTC19-210	ENST00000583704	NHS	Q6T4R5	1651 aa		31.36	■■■□□ 2.61
TTC19-210	ENST00000583704	ANKRD36B	Q8N2N9	1353 aa		31.35	■■■□□ 2.61
TTC19-210	ENST00000583704	IL2RB	P14784	551 aa		31.35	■■■□□ 2.61
TTC19-210	ENST00000583704	FAM208A	Q9UK61	1670 aa	Known RBP	31.35	■■■□□ 2.61
TTC19-210	ENST00000583704	COG3	Q96JB2	828 aa		31.34	■■■□□ 2.61
TTC19-210	ENST00000583704	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.34	■■■□□ 2.61
TTC19-210	ENST00000583704	IP6K1	Q92551	441 aa		31.33	■■■□□ 2.61
TTC19-210	ENST00000583704	TMF1	P82094	1093 aa		31.32	■■■□□ 2.6
TTC19-210	ENST00000583704	PROM2	Q8N271	834 aa		31.32	■■■□□ 2.6
TTC19-210	ENST00000583704	CLSPN	Q9HAW4	1339 aa		31.31	■■■□□ 2.6
TTC19-210	ENST00000583704	KCNQ2	O43526	872 aa		31.31	■■■□□ 2.6
TTC19-210	ENST00000583704	CASZ1	Q86V15	1759 aa		31.3	■■■□□ 2.6
TTC19-210	ENST00000583704	LTV1	Q96GA3	475 aa	Predicted RBP	31.29	■■■□□ 2.6
TTC19-210	ENST00000583704	ACSBG1	Q96GR2	724 aa		31.29	■■■□□ 2.6
TTC19-210	ENST00000583704	MAP3K19	Q56UN5	1328 aa		31.28	■■■□□ 2.6
TTC19-210	ENST00000583704	FBLN1	P23142	703 aa		31.28	■■■□□ 2.6
TTC19-210	ENST00000583704	TXNRD1	Q16881	649 aa		31.26	■■■□□ 2.59
TTC19-210	ENST00000583704	SPON1	Q9HCB6	807 aa		31.26	■■■□□ 2.59
TTC19-210	ENST00000583704	RGPD2	P0DJD1	1756 aa		31.25	■■■□□ 2.59
TTC19-210	ENST00000583704	HOXC9	P31274	260 aa		31.25	■■■□□ 2.59
TTC19-210	ENST00000583704	TIMELESS	Q9UNS1	1208 aa		31.25	■■■□□ 2.59
TTC19-210	ENST00000583704	BTAF1	O14981	1849 aa		31.25	■■■□□ 2.59
TTC19-210	ENST00000583704	AMPH	P49418	695 aa		31.23	■■■□□ 2.59
TTC19-210	ENST00000583704	KIF20B	Q96Q89	1820 aa		31.23	■■■□□ 2.59
TTC19-210	ENST00000583704	KAT6B	Q8WYB5	2073 aa		31.23	■■■□□ 2.59
TTC19-210	ENST00000583704	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.21	■■■□□ 2.59
TTC19-210	ENST00000583704	GGNBP2	Q9H3C7	697 aa		31.21	■■■□□ 2.59
TTC19-210	ENST00000583704	MYOM1	P52179	1685 aa		31.21	■■■□□ 2.59
TTC19-210	ENST00000583704	FYB1	O15117	783 aa		31.2	■■■□□ 2.59
TTC19-210	ENST00000583704	PPP1R1B	Q9UD71	204 aa	Predicted RBP	31.2	■■■□□ 2.59
TTC19-210	ENST00000583704	RTL1	A6NKG5	1358 aa		31.19	■■■□□ 2.58
TTC19-210	ENST00000583704	RRS1	Q15050	365 aa	Known RBP	31.19	■■■□□ 2.58
TTC19-210	ENST00000583704	CDCA8	Q53HL2	280 aa		31.18	■■■□□ 2.58
TTC19-210	ENST00000583704	STK32B	Q9NY57	414 aa		31.18	■■■□□ 2.58
TTC19-210	ENST00000583704	DDX54	Q8TDD1	881 aa	Known RBP	31.17	■■■□□ 2.58
TTC19-210	ENST00000583704	SHANK3	Q9BYB0	1731 aa		31.16	■■■□□ 2.58
TTC19-210	ENST00000583704	CCER1	Q8TC90	406 aa	Predicted RBP	31.16	■■■□□ 2.58
TTC19-210	ENST00000583704	PAPPA	Q13219	1627 aa		31.16	■■■□□ 2.58
TTC19-210	ENST00000583704	SLC15A2	Q16348	729 aa		31.15	■■■□□ 2.58
TTC19-210	ENST00000583704	MEGF6	O75095	1541 aa		31.14	■■■□□ 2.57
TTC19-210	ENST00000583704	ZBTB7A	O95365	584 aa		31.13	■■■□□ 2.57
TTC19-210	ENST00000583704	DOT1L	Q8TEK3	1739 aa		31.12	■■■□□ 2.57
TTC19-210	ENST00000583704	SMG6	Q86US8	1419 aa	Known RBP	31.09	■■■□□ 2.57
TTC19-210	ENST00000583704	NSD3	Q9BZ95	1437 aa		31.09	■■■□□ 2.57
TTC19-210	ENST00000583704	NBPF6	Q5VWK0	638 aa		31.08	■■■□□ 2.57
TTC19-210	ENST00000583704	NBPF4	Q96M43	638 aa		31.08	■■■□□ 2.57
TTC19-210	ENST00000583704	USHBP1	Q8N6Y0	703 aa		31.07	■■■□□ 2.56
TTC19-210	ENST00000583704	CARD14	Q9BXL6	1004 aa		31.07	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms