RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 PEAK1Q9H792 1746 aa12.4□□□□□ -0.42
CDK5RAP3-229ENST00000583697 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-229ENST00000583697 NFAT5O94916 1531 aa12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 APBA3O96018 575 aa12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
CDK5RAP3-229ENST00000583697 TTC21BQ7Z4L5 1316 aa12.38□□□□□ -0.43
CDK5RAP3-229ENST00000583697 SOX12O15370 315 aa12.38□□□□□ -0.43
CDK5RAP3-229ENST00000583697 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
CDK5RAP3-229ENST00000583697 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
CDK5RAP3-229ENST00000583697 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-229ENST00000583697 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-229ENST00000583697 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
CDK5RAP3-229ENST00000583697 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-229ENST00000583697 DDB1Q16531 1140 aa12.35□□□□□ -0.43
CDK5RAP3-229ENST00000583697 CAMKK2Q96RR4 588 aa12.35□□□□□ -0.43
CDK5RAP3-229ENST00000583697 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-229ENST00000583697 CD163L1Q9NR16 1453 aa12.34□□□□□ -0.43
CDK5RAP3-229ENST00000583697 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-229ENST00000583697 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
CDK5RAP3-229ENST00000583697 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-229ENST00000583697 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
CDK5RAP3-229ENST00000583697 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-229ENST00000583697 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
CDK5RAP3-229ENST00000583697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK5RAP3-229ENST00000583697 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
CDK5RAP3-229ENST00000583697 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
CDK5RAP3-229ENST00000583697 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
CDK5RAP3-229ENST00000583697 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
CDK5RAP3-229ENST00000583697 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
CDK5RAP3-229ENST00000583697 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
CDK5RAP3-229ENST00000583697 NINLQ9Y2I6 1382 aa12.31□□□□□ -0.44
CDK5RAP3-229ENST00000583697 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
CDK5RAP3-229ENST00000583697 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
CDK5RAP3-229ENST00000583697 BCL9O00512 1426 aa12.29□□□□□ -0.44
CDK5RAP3-229ENST00000583697 NME9Q86XW9 330 aa12.29□□□□□ -0.44
CDK5RAP3-229ENST00000583697 ERBB3P21860 1342 aa12.29□□□□□ -0.44
CDK5RAP3-229ENST00000583697 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
CDK5RAP3-229ENST00000583697 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.44
CDK5RAP3-229ENST00000583697 EXOC5O00471 708 aa12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 PLSCR1O15162 318 aa12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 MARCH10Q8NA82 808 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 PUS7Q96PZ0 661 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
CDK5RAP3-229ENST00000583697 BTAF1O14981 1849 aa12.25□□□□□ -0.45
CDK5RAP3-229ENST00000583697 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
CDK5RAP3-229ENST00000583697 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
CDK5RAP3-229ENST00000583697 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
CDK5RAP3-229ENST00000583697 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-229ENST00000583697 IL2RBP14784 551 aa12.24□□□□□ -0.45
CDK5RAP3-229ENST00000583697 ANKRD36BQ8N2N9 1353 aa12.24□□□□□ -0.45
CDK5RAP3-229ENST00000583697 DOT1LQ8TEK3 1739 aa12.24□□□□□ -0.45
CDK5RAP3-229ENST00000583697 MYOM1P52179 1685 aa12.23□□□□□ -0.45
CDK5RAP3-229ENST00000583697 USP47Q96K76 1375 aa12.23□□□□□ -0.45
CDK5RAP3-229ENST00000583697 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
CDK5RAP3-229ENST00000583697 SPON1Q9HCB6 807 aa12.23□□□□□ -0.45
CDK5RAP3-229ENST00000583697 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
CDK5RAP3-229ENST00000583697 COG3Q96JB2 828 aa12.22□□□□□ -0.45
CDK5RAP3-229ENST00000583697 TESK2Q96S53 571 aa12.22□□□□□ -0.45
CDK5RAP3-229ENST00000583697 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-229ENST00000583697 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
CDK5RAP3-229ENST00000583697 SMG6Q86US8 1419 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-229ENST00000583697 RTL1A6NKG5 1358 aa12.21□□□□□ -0.45
CDK5RAP3-229ENST00000583697 SHANK3Q9BYB0 1731 aa12.21□□□□□ -0.45
CDK5RAP3-229ENST00000583697 KCNQ2O43526 872 aa12.21□□□□□ -0.45
CDK5RAP3-229ENST00000583697 TMF1P82094 1093 aa12.21□□□□□ -0.45
CDK5RAP3-229ENST00000583697 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
CDK5RAP3-229ENST00000583697 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
CDK5RAP3-229ENST00000583697 ACSBG1Q96GR2 724 aa12.2□□□□□ -0.46
CDK5RAP3-229ENST00000583697 STK32BQ9NY57 414 aa12.2□□□□□ -0.46
CDK5RAP3-229ENST00000583697 IP6K1Q92551 441 aa12.19□□□□□ -0.46
CDK5RAP3-229ENST00000583697 LTV1Q96GA3 475 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-229ENST00000583697 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
CDK5RAP3-229ENST00000583697 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
CDK5RAP3-229ENST00000583697 AMPHP49418 695 aa12.18□□□□□ -0.46
CDK5RAP3-229ENST00000583697 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
CDK5RAP3-229ENST00000583697 HOXC9P31274 260 aa12.17□□□□□ -0.46
CDK5RAP3-229ENST00000583697 CDCA8Q53HL2 280 aa12.17□□□□□ -0.46
CDK5RAP3-229ENST00000583697 MEGF6O75095 1541 aa12.16□□□□□ -0.46
CDK5RAP3-229ENST00000583697 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
CDK5RAP3-229ENST00000583697 ANKRD26Q9UPS8 1709 aa12.16□□□□□ -0.46
CDK5RAP3-229ENST00000583697 LY75O60449 1722 aa12.15□□□□□ -0.46
CDK5RAP3-229ENST00000583697 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
CDK5RAP3-229ENST00000583697 PROM2Q8N271 834 aa12.15□□□□□ -0.46
CDK5RAP3-229ENST00000583697 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
CDK5RAP3-229ENST00000583697 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-229ENST00000583697 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
CDK5RAP3-229ENST00000583697 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
CDK5RAP3-229ENST00000583697 RRS1Q15050 365 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-229ENST00000583697 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-229ENST00000583697 PDGFDQ9GZP0 370 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-229ENST00000583697 FLT4P35916 1363 aa12.13□□□□□ -0.47
CDK5RAP3-229ENST00000583697 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
CDK5RAP3-229ENST00000583697 MTFR1LQ9H019 292 aa12.12□□□□□ -0.47
CDK5RAP3-229ENST00000583697 KIF24Q5T7B8 1368 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms