RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
CCDC57-218ENST00000583593 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
CCDC57-218ENST00000583593 RGPD3A6NKT7 1758 aaPredicted RBP19.37■□□□□ 0.69
CCDC57-218ENST00000583593 RGPD4Q7Z3J3 1758 aa19.37■□□□□ 0.69
CCDC57-218ENST00000583593 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
CCDC57-218ENST00000583593 DDB1Q16531 1140 aa19.37■□□□□ 0.69
CCDC57-218ENST00000583593 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
CCDC57-218ENST00000583593 PLSCR1O15162 318 aa19.35■□□□□ 0.69
CCDC57-218ENST00000583593 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
CCDC57-218ENST00000583593 MARCH10Q8NA82 808 aaPredicted RBP19.34■□□□□ 0.69
CCDC57-218ENST00000583593 NFAT5O94916 1531 aa19.34■□□□□ 0.69
CCDC57-218ENST00000583593 NEUROD1Q13562 356 aa19.33■□□□□ 0.68
CCDC57-218ENST00000583593 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.68
CCDC57-218ENST00000583593 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
CCDC57-218ENST00000583593 SOX12O15370 315 aa19.32■□□□□ 0.68
CCDC57-218ENST00000583593 PROM2Q8N271 834 aa19.32■□□□□ 0.68
CCDC57-218ENST00000583593 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
CCDC57-218ENST00000583593 ANO8Q9HCE9 1232 aaPredicted RBP19.32■□□□□ 0.68
CCDC57-218ENST00000583593 BCL9O00512 1426 aa19.32■□□□□ 0.68
CCDC57-218ENST00000583593 MON2Q7Z3U7 1717 aa19.31■□□□□ 0.68
CCDC57-218ENST00000583593 CARD10Q9BWT7 1032 aa19.31■□□□□ 0.68
CCDC57-218ENST00000583593 CASZ1Q86V15 1759 aa19.3■□□□□ 0.68
CCDC57-218ENST00000583593 KCNQ2O43526 872 aa19.3■□□□□ 0.68
CCDC57-218ENST00000583593 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
CCDC57-218ENST00000583593 SPON1Q9HCB6 807 aa19.3■□□□□ 0.68
CCDC57-218ENST00000583593 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
CCDC57-218ENST00000583593 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
CCDC57-218ENST00000583593 USP54Q70EL1 1684 aa19.27■□□□□ 0.68
CCDC57-218ENST00000583593 CSB-PGBD3P0DP91 1061 aa19.27■□□□□ 0.68
CCDC57-218ENST00000583593 PDGFDQ9GZP0 370 aaPredicted RBP19.27■□□□□ 0.68
CCDC57-218ENST00000583593 ABCC6O95255 1503 aa19.26■□□□□ 0.67
CCDC57-218ENST00000583593 USP31Q70CQ4 1352 aa19.26■□□□□ 0.67
CCDC57-218ENST00000583593 SBNO2Q9Y2G9 1366 aa19.26■□□□□ 0.67
CCDC57-218ENST00000583593 CCDC7Q96M83 1385 aa19.24■□□□□ 0.67
CCDC57-218ENST00000583593 EXOC5O00471 708 aa19.24■□□□□ 0.67
CCDC57-218ENST00000583593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■■■□ 21.8
CCDC57-218ENST00000583593 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
CCDC57-218ENST00000583593 TXNRD1Q16881 649 aa19.23■□□□□ 0.67
CCDC57-218ENST00000583593 NME9Q86XW9 330 aa19.23■□□□□ 0.67
CCDC57-218ENST00000583593 LTN1O94822 1766 aa19.23■□□□□ 0.67
CCDC57-218ENST00000583593 TNS2Q63HR2 1409 aa19.23■□□□□ 0.67
CCDC57-218ENST00000583593 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
CCDC57-218ENST00000583593 ERBB3P21860 1342 aa19.21■□□□□ 0.67
CCDC57-218ENST00000583593 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
CCDC57-218ENST00000583593 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
CCDC57-218ENST00000583593 SLC12A5Q9H2X9 1139 aa19.2■□□□□ 0.66
CCDC57-218ENST00000583593 YY1P25490 414 aa19.19■□□□□ 0.66
CCDC57-218ENST00000583593 MYOM1P52179 1685 aa19.18■□□□□ 0.66
CCDC57-218ENST00000583593 ZBTB7AO95365 584 aa19.18■□□□□ 0.66
CCDC57-218ENST00000583593 PTGER2P43116 358 aa19.18■□□□□ 0.66
CCDC57-218ENST00000583593 UTRNP46939 3433 aa19.18■□□□□ 0.66
CCDC57-218ENST00000583593 SLC15A2Q16348 729 aa19.17■□□□□ 0.66
CCDC57-218ENST00000583593 TMC1Q8TDI8 760 aa19.17■□□□□ 0.66
CCDC57-218ENST00000583593 ACSBG1Q96GR2 724 aa19.17■□□□□ 0.66
CCDC57-218ENST00000583593 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
CCDC57-218ENST00000583593 STK32BQ9NY57 414 aa19.16■□□□□ 0.66
CCDC57-218ENST00000583593 ATF5Q9Y2D1 282 aaPredicted RBP19.16■□□□□ 0.66
CCDC57-218ENST00000583593 EDC4Q6P2E9 1401 aaKnown RBP19.16■□□□□ 0.66
CCDC57-218ENST00000583593 IL2RBP14784 551 aa19.15■□□□□ 0.66
CCDC57-218ENST00000583593 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
CCDC57-218ENST00000583593 ANKRD24Q8TF21 1146 aa19.15■□□□□ 0.66
CCDC57-218ENST00000583593 A0A1W2PP64 1363 aa19.15■□□□□ 0.66
CCDC57-218ENST00000583593 PAPPAQ13219 1627 aa19.14■□□□□ 0.66
CCDC57-218ENST00000583593 BTAF1O14981 1849 aa19.14■□□□□ 0.65
CCDC57-218ENST00000583593 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
CCDC57-218ENST00000583593 SGIP1Q9BQI5 828 aa19.12■□□□□ 0.65
CCDC57-218ENST00000583593 TERF2IPQ9NYB0 399 aa19.11■□□□□ 0.65
CCDC57-218ENST00000583593 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CCDC57-218ENST00000583593 IP6K1Q92551 441 aa19.1■□□□□ 0.65
CCDC57-218ENST00000583593 TESK2Q96S53 571 aa19.09■□□□□ 0.65
CCDC57-218ENST00000583593 MTFR1LQ9H019 292 aa19.09■□□□□ 0.65
CCDC57-218ENST00000583593 LRRC4BQ9NT99 713 aa19.09■□□□□ 0.65
CCDC57-218ENST00000583593 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
CCDC57-218ENST00000583593 ZNF827Q17R98 1081 aa19.08■□□□□ 0.64
CCDC57-218ENST00000583593 SYT17Q9BSW7 474 aa19.08■□□□□ 0.64
CCDC57-218ENST00000583593 FHDC1Q9C0D6 1143 aaPredicted RBP19.08■□□□□ 0.64
CCDC57-218ENST00000583593 FAM208AQ9UK61 1670 aaKnown RBP19.08■□□□□ 0.64
CCDC57-218ENST00000583593 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
CCDC57-218ENST00000583593 FBLN1P23142 703 aa19.06■□□□□ 0.64
CCDC57-218ENST00000583593 RGPD2P0DJD1 1756 aa19.06■□□□□ 0.64
CCDC57-218ENST00000583593 ST20-MTHFSA0A0A6YYL1 179 aa19.05■□□□□ 0.64
CCDC57-218ENST00000583593 LTV1Q96GA3 475 aaPredicted RBP19.05■□□□□ 0.64
CCDC57-218ENST00000583593 MAP3K19Q56UN5 1328 aa19.04■□□□□ 0.64
CCDC57-218ENST00000583593 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
CCDC57-218ENST00000583593 SHANK3Q9BYB0 1731 aa19.04■□□□□ 0.64
CCDC57-218ENST00000583593 HOXC9P31274 260 aa19.03■□□□□ 0.64
CCDC57-218ENST00000583593 QSER1Q2KHR3 1735 aa19.03■□□□□ 0.64
CCDC57-218ENST00000583593 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
CCDC57-218ENST00000583593 ARXQ96QS3 562 aa19.02■□□□□ 0.64
CCDC57-218ENST00000583593 DOT1LQ8TEK3 1739 aa19.01■□□□□ 0.63
CCDC57-218ENST00000583593 COG3Q96JB2 828 aa19.01■□□□□ 0.63
CCDC57-218ENST00000583593 COL24A1Q17RW2 1714 aa19■□□□□ 0.63
CCDC57-218ENST00000583593 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
CCDC57-218ENST00000583593 LY75O60449 1722 aa19■□□□□ 0.63
CCDC57-218ENST00000583593 NSD2O96028 1365 aa18.99■□□□□ 0.63
CCDC57-218ENST00000583593 MAP3K5Q99683 1374 aa18.99■□□□□ 0.63
CCDC57-218ENST00000583593 PRIM1P49642 420 aaKnown RBP18.99■□□□□ 0.63
CCDC57-218ENST00000583593 SLC27A3Q5K4L6 730 aa18.99■□□□□ 0.63
CCDC57-218ENST00000583593 MEGF6O75095 1541 aa18.99■□□□□ 0.63
CCDC57-218ENST00000583593 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms