RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
DHX40-209ENST00000583439 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
DHX40-209ENST00000583439 NR3C2P08235 984 aa8.49□□□□□ -1.05
DHX40-209ENST00000583439 GRM5P41594 1212 aa8.49□□□□□ -1.05
DHX40-209ENST00000583439 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
DHX40-209ENST00000583439 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
DHX40-209ENST00000583439 VEGFBP49765 207 aa8.48□□□□□ -1.05
DHX40-209ENST00000583439 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
DHX40-209ENST00000583439 SLC10A4Q96EP9 437 aa8.48□□□□□ -1.05
DHX40-209ENST00000583439 C1QTNF2Q9BXJ5 285 aa8.48□□□□□ -1.05
DHX40-209ENST00000583439 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
DHX40-209ENST00000583439 BMP2P12643 396 aa8.47□□□□□ -1.05
DHX40-209ENST00000583439 RFC5P40937 340 aa8.47□□□□□ -1.05
DHX40-209ENST00000583439 GSK3AP49840 483 aa8.47□□□□□ -1.05
DHX40-209ENST00000583439 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
DHX40-209ENST00000583439 PTK2Q05397 1052 aa8.46□□□□□ -1.06
DHX40-209ENST00000583439 CCDC116Q8IYX3 515 aa8.46□□□□□ -1.06
DHX40-209ENST00000583439 MAN1A2O60476 641 aa8.45□□□□□ -1.06
DHX40-209ENST00000583439 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
DHX40-209ENST00000583439 TRMT44Q8IYL2 757 aaKnown RBP8.45□□□□□ -1.06
DHX40-209ENST00000583439 EPS8L1Q8TE68 723 aa8.45□□□□□ -1.06
DHX40-209ENST00000583439 KLF16Q9BXK1 252 aaPredicted RBP8.45□□□□□ -1.06
DHX40-209ENST00000583439 MAP4K5Q9Y4K4 846 aa8.45□□□□□ -1.06
DHX40-209ENST00000583439 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
DHX40-209ENST00000583439 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
DHX40-209ENST00000583439 RAB15P59190 212 aa8.44□□□□□ -1.06
DHX40-209ENST00000583439 TMEM151AQ8N4L1 468 aa8.44□□□□□ -1.06
DHX40-209ENST00000583439 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
DHX40-209ENST00000583439 KCTD15Q96SI1 283 aaPredicted RBP8.43□□□□□ -1.06
DHX40-209ENST00000583439 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
DHX40-209ENST00000583439 ZC3H4Q9UPT8 1303 aaKnown RBP8.43□□□□□ -1.06
DHX40-209ENST00000583439 ADAM32Q8TC27 787 aa8.42□□□□□ -1.06
DHX40-209ENST00000583439 CDV3Q9UKY7 258 aaKnown RBP8.42□□□□□ -1.06
DHX40-209ENST00000583439 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
DHX40-209ENST00000583439 TMEM259Q4ZIN3 620 aa8.41□□□□□ -1.06
DHX40-209ENST00000583439 PPP1R26Q5T8A7 1209 aaPredicted RBP8.41□□□□□ -1.06
DHX40-209ENST00000583439 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
DHX40-209ENST00000583439 LINC00528Q8N1L1 170 aa8.41□□□□□ -1.06
DHX40-209ENST00000583439 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
DHX40-209ENST00000583439 GDF11O95390 407 aa8.4□□□□□ -1.06
DHX40-209ENST00000583439 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
DHX40-209ENST00000583439 MEIOBQ8N635 442 aa8.4□□□□□ -1.06
DHX40-209ENST00000583439 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
DHX40-209ENST00000583439 CBLBQ13191 982 aa8.39□□□□□ -1.07
DHX40-209ENST00000583439 TSEN34Q9BSV6 310 aaKnown RBP8.39□□□□□ -1.07
DHX40-209ENST00000583439 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
DHX40-209ENST00000583439 RASSF7Q02833 373 aa8.38□□□□□ -1.07
DHX40-209ENST00000583439 NBPF20Q3BBV1 942 aa8.38□□□□□ -1.07
DHX40-209ENST00000583439 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
DHX40-209ENST00000583439 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
DHX40-209ENST00000583439 FIGNL2A6NMB9 653 aa8.35□□□□□ -1.07
DHX40-209ENST00000583439 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
DHX40-209ENST00000583439 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
DHX40-209ENST00000583439 TTLL8A6PVC2 850 aa8.34□□□□□ -1.07
DHX40-209ENST00000583439 RELBQ01201 579 aa8.34□□□□□ -1.07
DHX40-209ENST00000583439 TRIM34Q9BYJ4 488 aa8.34□□□□□ -1.07
DHX40-209ENST00000583439 TMPRSS4Q9NRS4 437 aa8.34□□□□□ -1.07
DHX40-209ENST00000583439 PCDHB9Q9Y5E1 797 aa8.34□□□□□ -1.07
DHX40-209ENST00000583439 DNMT3LQ9UJW3 386 aa8.33□□□□□ -1.08
DHX40-209ENST00000583439 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
DHX40-209ENST00000583439 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
DHX40-209ENST00000583439 ERVH48-1M5A8F1 160 aa8.31□□□□□ -1.08
DHX40-209ENST00000583439 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.08
DHX40-209ENST00000583439 XP32Q5T750 250 aa8.31□□□□□ -1.08
DHX40-209ENST00000583439 ZNF784Q8NCA9 323 aaPredicted RBP8.31□□□□□ -1.08
DHX40-209ENST00000583439 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
DHX40-209ENST00000583439 POLMQ9NP87 494 aaPredicted RBP8.31□□□□□ -1.08
DHX40-209ENST00000583439 IGHA1P01876 353 aa8.3□□□□□ -1.08
DHX40-209ENST00000583439 Q6ZVU0 165 aa8.3□□□□□ -1.08
DHX40-209ENST00000583439 INSM2Q96T92 566 aaPredicted RBP8.29□□□□□ -1.08
DHX40-209ENST00000583439 CYLDQ9NQC7 956 aa8.29□□□□□ -1.08
DHX40-209ENST00000583439 APBB1O00213 710 aa8.28□□□□□ -1.08
DHX40-209ENST00000583439 SPINT1O43278 529 aa8.28□□□□□ -1.08
DHX40-209ENST00000583439 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
DHX40-209ENST00000583439 FBXO45P0C2W1 286 aa8.28□□□□□ -1.08
DHX40-209ENST00000583439 TRIM52Q96A61 297 aa8.28□□□□□ -1.08
DHX40-209ENST00000583439 GJD4Q96KN9 370 aaPredicted RBP8.28□□□□□ -1.08
DHX40-209ENST00000583439 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
DHX40-209ENST00000583439 BANK1Q8NDB2 785 aa8.27□□□□□ -1.09
DHX40-209ENST00000583439 ESF1Q9H501 851 aaKnown RBP8.27□□□□□ -1.09
DHX40-209ENST00000583439 ADAMTS8Q9UP79 889 aa8.27□□□□□ -1.09
DHX40-209ENST00000583439 ZNF330Q9Y3S2 320 aaPredicted RBP8.27□□□□□ -1.09
DHX40-209ENST00000583439 NDUFB9Q9Y6M9 179 aa8.27□□□□□ -1.09
DHX40-209ENST00000583439 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
DHX40-209ENST00000583439 PTSQ03393 145 aa8.26□□□□□ -1.09
DHX40-209ENST00000583439 ADH1AP07327 375 aa8.25□□□□□ -1.09
DHX40-209ENST00000583439 ADD1P35611 737 aaKnown RBP8.25□□□□□ -1.09
DHX40-209ENST00000583439 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
DHX40-209ENST00000583439 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
DHX40-209ENST00000583439 SNRKQ9NRH2 765 aa8.25□□□□□ -1.09
DHX40-209ENST00000583439 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
DHX40-209ENST00000583439 ESPNB1AK53 854 aa8.24□□□□□ -1.09
DHX40-209ENST00000583439 NR1H3Q13133 447 aa8.24□□□□□ -1.09
DHX40-209ENST00000583439 RNF20Q5VTR2 975 aa8.24□□□□□ -1.09
DHX40-209ENST00000583439 LILRA1O75019 489 aa8.23□□□□□ -1.09
DHX40-209ENST00000583439 PTGIRP43119 386 aa8.23□□□□□ -1.09
DHX40-209ENST00000583439 FOXK2Q01167 660 aa8.23□□□□□ -1.09
DHX40-209ENST00000583439 MTMR14Q8NCE2 650 aa8.23□□□□□ -1.09
DHX40-209ENST00000583439 ZNF592Q92610 1267 aa8.23□□□□□ -1.09
DHX40-209ENST00000583439 KRTAP4-8Q9BYQ9 185 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms