RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
SMARCE1-219ENST00000583294 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
SMARCE1-219ENST00000583294 ALG2Q9H553 416 aa10.8□□□□□ -0.68
SMARCE1-219ENST00000583294 SERPINA10Q9UK55 444 aa10.8□□□□□ -0.68
SMARCE1-219ENST00000583294 AGERQ15109 404 aa10.79□□□□□ -0.68
SMARCE1-219ENST00000583294 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
SMARCE1-219ENST00000583294 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
SMARCE1-219ENST00000583294 CARD14Q9BXL6 1004 aa10.79□□□□□ -0.68
SMARCE1-219ENST00000583294 MAGEB6P1A0A0J9YX57 407 aa10.78□□□□□ -0.68
SMARCE1-219ENST00000583294 SOX11P35716 441 aa10.77□□□□□ -0.69
SMARCE1-219ENST00000583294 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
SMARCE1-219ENST00000583294 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
SMARCE1-219ENST00000583294 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.69
SMARCE1-219ENST00000583294 PCDHB9Q9Y5E1 797 aa10.77□□□□□ -0.69
SMARCE1-219ENST00000583294 SH3BP5LQ7L8J4 393 aa10.76□□□□□ -0.69
SMARCE1-219ENST00000583294 ADAM32Q8TC27 787 aa10.76□□□□□ -0.69
SMARCE1-219ENST00000583294 C11orf95C9JLR9 678 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-219ENST00000583294 ATP13A2Q9NQ11 1180 aa10.74□□□□□ -0.69
SMARCE1-219ENST00000583294 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
SMARCE1-219ENST00000583294 BPHLQ86WA6 291 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-219ENST00000583294 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
SMARCE1-219ENST00000583294 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
SMARCE1-219ENST00000583294 DZIP3Q86Y13 1208 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-219ENST00000583294 UCN2Q96RP3 112 aa10.71□□□□□ -0.69
SMARCE1-219ENST00000583294 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
SMARCE1-219ENST00000583294 RFX1P22670 979 aa10.7□□□□□ -0.7
SMARCE1-219ENST00000583294 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
SMARCE1-219ENST00000583294 ARXQ96QS3 562 aa10.7□□□□□ -0.7
SMARCE1-219ENST00000583294 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-219ENST00000583294 VARSP26640 1264 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-219ENST00000583294 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
SMARCE1-219ENST00000583294 TFIP11Q9UBB9 837 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-219ENST00000583294 PALM3A6NDB9 673 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-219ENST00000583294 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
SMARCE1-219ENST00000583294 TBC1D9Q6ZT07 1266 aa10.68□□□□□ -0.7
SMARCE1-219ENST00000583294 CEP126Q9P2H0 1117 aa10.68□□□□□ -0.7
SMARCE1-219ENST00000583294 LMOD1P29536 600 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-219ENST00000583294 HOMEZQ8IX15 550 aa10.66□□□□□ -0.7
SMARCE1-219ENST00000583294 SLC10A4Q96EP9 437 aa10.66□□□□□ -0.7
SMARCE1-219ENST00000583294 CAPN5O15484 640 aaPredicted RBP10.65□□□□□ -0.7
SMARCE1-219ENST00000583294 MCCD1P59942 119 aaPredicted RBP10.65□□□□□ -0.7
SMARCE1-219ENST00000583294 CFAP70Q5T0N1 1121 aa10.65□□□□□ -0.7
SMARCE1-219ENST00000583294 ZNF592Q92610 1267 aa10.65□□□□□ -0.7
SMARCE1-219ENST00000583294 C1QTNF2Q9BXJ5 285 aa10.65□□□□□ -0.7
SMARCE1-219ENST00000583294 SKIP12755 728 aa10.64□□□□□ -0.71
SMARCE1-219ENST00000583294 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
SMARCE1-219ENST00000583294 TREML4Q6UXN2 200 aa10.64□□□□□ -0.71
SMARCE1-219ENST00000583294 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
SMARCE1-219ENST00000583294 TRIM47Q96LD4 638 aa10.64□□□□□ -0.71
SMARCE1-219ENST00000583294 GIGYF1O75420 1035 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-219ENST00000583294 RNF135Q8IUD6 432 aa10.63□□□□□ -0.71
SMARCE1-219ENST00000583294 MPNDQ8N594 471 aa10.63□□□□□ -0.71
SMARCE1-219ENST00000583294 SENP2Q9HC62 589 aa10.63□□□□□ -0.71
SMARCE1-219ENST00000583294 ATP9BO43861 1147 aa10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 BMP1P13497 986 aa10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 NNTQ13423 1086 aa10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 LCE2AQ5TA79 106 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 MAFBQ9Y5Q3 323 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-219ENST00000583294 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-219ENST00000583294 CDCA8Q53HL2 280 aa10.61□□□□□ -0.71
SMARCE1-219ENST00000583294 RAB15P59190 212 aa10.6□□□□□ -0.71
SMARCE1-219ENST00000583294 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
SMARCE1-219ENST00000583294 TRMT44Q8IYL2 757 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-219ENST00000583294 DEPDC4Q8N2C3 294 aa10.6□□□□□ -0.71
SMARCE1-219ENST00000583294 PHTF2Q8N3S3 785 aa10.6□□□□□ -0.71
SMARCE1-219ENST00000583294 KIFC2Q96AC6 838 aa10.59□□□□□ -0.71
SMARCE1-219ENST00000583294 CDK15Q96Q40 435 aa10.59□□□□□ -0.71
SMARCE1-219ENST00000583294 USP17L5A8MUK1 530 aa10.58□□□□□ -0.72
SMARCE1-219ENST00000583294 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
SMARCE1-219ENST00000583294 VASH1Q7L8A9 365 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-219ENST00000583294 PLPP7Q8NBV4 271 aa10.58□□□□□ -0.72
SMARCE1-219ENST00000583294 NFATC2IPQ8NCF5 419 aa10.58□□□□□ -0.72
SMARCE1-219ENST00000583294 WFS1O76024 890 aa10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 ADH1CP00326 375 aa10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 WDR4P57081 412 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 NFX1Q12986 1120 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 PBXIP1Q96AQ6 731 aa10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 KCTD15Q96SI1 283 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-219ENST00000583294 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 TIMP2P16035 220 aa10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 GRM5P41594 1212 aa10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 CDV3Q9UKY7 258 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-219ENST00000583294 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-219ENST00000583294 RNF20Q5VTR2 975 aa10.55□□□□□ -0.72
SMARCE1-219ENST00000583294 ACIN1Q9UKV3 1341 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-219ENST00000583294 ESPNB1AK53 854 aa10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 NR3C2P08235 984 aa10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 NCOA4Q13772 614 aa10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 DOLKQ9UPQ8 538 aa10.54□□□□□ -0.72
SMARCE1-219ENST00000583294 CDCA7Q9BWT1 371 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms