RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 EMILIN1Q9Y6C2 1016 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 USP17L8P0C7I0 530 aa8.05□□□□□ -1.12
PTPRM-215ENST00000583289 PTK2Q05397 1052 aa8.05□□□□□ -1.12
PTPRM-215ENST00000583289 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
PTPRM-215ENST00000583289 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
PTPRM-215ENST00000583289 WIPF1O43516 503 aa8.04□□□□□ -1.12
PTPRM-215ENST00000583289 MEIOBQ8N635 442 aa8.04□□□□□ -1.12
PTPRM-215ENST00000583289 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
PTPRM-215ENST00000583289 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
PTPRM-215ENST00000583289 DHX9Q08211 1270 aaKnown RBP8.02□□□□□ -1.13
PTPRM-215ENST00000583289 PGPEP1Q9NXJ5 209 aa8.02□□□□□ -1.13
PTPRM-215ENST00000583289 CCDC180Q9P1Z9 1646 aa8.02□□□□□ -1.13
PTPRM-215ENST00000583289 BMP2P12643 396 aa8.01□□□□□ -1.13
PTPRM-215ENST00000583289 NBPF20Q3BBV1 942 aa8.01□□□□□ -1.13
PTPRM-215ENST00000583289 IRF7Q92985 503 aa8.01□□□□□ -1.13
PTPRM-215ENST00000583289 KCTD15Q96SI1 283 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-215ENST00000583289 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
PTPRM-215ENST00000583289 HMX1Q9NP08 348 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-215ENST00000583289 INSM1Q01101 510 aaPredicted RBP8□□□□□ -1.13
PTPRM-215ENST00000583289 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
PTPRM-215ENST00000583289 IL27Q8NEV9 243 aa8□□□□□ -1.13
PTPRM-215ENST00000583289 ADAM32Q8TC27 787 aa8□□□□□ -1.13
PTPRM-215ENST00000583289 H3BM21 787 aa7.99□□□□□ -1.13
PTPRM-215ENST00000583289 MAN1A2O60476 641 aa7.99□□□□□ -1.13
PTPRM-215ENST00000583289 BRPF1P55201 1214 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-215ENST00000583289 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-215ENST00000583289 EPS8L1Q8TE68 723 aa7.99□□□□□ -1.13
PTPRM-215ENST00000583289 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
PTPRM-215ENST00000583289 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
PTPRM-215ENST00000583289 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.14
PTPRM-215ENST00000583289 Q6ZVU0 165 aa7.96□□□□□ -1.14
PTPRM-215ENST00000583289 DZIP3Q86Y13 1208 aaKnown RBP7.96□□□□□ -1.14
PTPRM-215ENST00000583289 STK17AQ9UEE5 414 aa7.96□□□□□ -1.14
PTPRM-215ENST00000583289 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-215ENST00000583289 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
PTPRM-215ENST00000583289 VEGFBP49765 207 aa7.95□□□□□ -1.14
PTPRM-215ENST00000583289 TRIM52Q96A61 297 aa7.95□□□□□ -1.14
PTPRM-215ENST00000583289 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
PTPRM-215ENST00000583289 TTLL8A6PVC2 850 aa7.93□□□□□ -1.14
PTPRM-215ENST00000583289 CBLBQ13191 982 aa7.93□□□□□ -1.14
PTPRM-215ENST00000583289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.93□□□□□ -1.14
PTPRM-215ENST00000583289 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
PTPRM-215ENST00000583289 ZBBXA8MT70 800 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 APBB1O00213 710 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 SOCS7O14512 581 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 SPINT1O43278 529 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 VSIG8P0DPA2 414 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 GMPRP36959 345 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 SEPT12Q8IYM1 358 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 GJD4Q96KN9 370 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-215ENST00000583289 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
PTPRM-215ENST00000583289 ERBB4Q15303 1308 aa7.91□□□□□ -1.14
PTPRM-215ENST00000583289 ESPNB1AK53 854 aa7.9□□□□□ -1.14
PTPRM-215ENST00000583289 ZNF592Q92610 1267 aa7.9□□□□□ -1.14
PTPRM-215ENST00000583289 RAB15P59190 212 aa7.89□□□□□ -1.15
PTPRM-215ENST00000583289 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
PTPRM-215ENST00000583289 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
PTPRM-215ENST00000583289 FAM181BA6NEQ2 426 aa7.88□□□□□ -1.15
PTPRM-215ENST00000583289 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
PTPRM-215ENST00000583289 PPFIA3O75145 1194 aa7.88□□□□□ -1.15
PTPRM-215ENST00000583289 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
PTPRM-215ENST00000583289 TMPRSS4Q9NRS4 437 aa7.88□□□□□ -1.15
PTPRM-215ENST00000583289 ADH1AP07327 375 aa7.87□□□□□ -1.15
PTPRM-215ENST00000583289 FBXO45P0C2W1 286 aa7.87□□□□□ -1.15
PTPRM-215ENST00000583289 RELBQ01201 579 aa7.87□□□□□ -1.15
PTPRM-215ENST00000583289 AGBL1Q96MI9 1066 aa7.87□□□□□ -1.15
PTPRM-215ENST00000583289 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
PTPRM-215ENST00000583289 PCDHB9Q9Y5E1 797 aa7.87□□□□□ -1.15
PTPRM-215ENST00000583289 NDUFB9Q9Y6M9 179 aa7.87□□□□□ -1.15
PTPRM-215ENST00000583289 NR1H3Q13133 447 aa7.86□□□□□ -1.15
PTPRM-215ENST00000583289 ZSCAN1Q8NBB4 408 aa7.86□□□□□ -1.15
PTPRM-215ENST00000583289 FIGNL2A6NMB9 653 aa7.85□□□□□ -1.15
PTPRM-215ENST00000583289 LILRA1O75019 489 aa7.85□□□□□ -1.15
PTPRM-215ENST00000583289 PTSQ03393 145 aa7.85□□□□□ -1.15
PTPRM-215ENST00000583289 RNF20Q5VTR2 975 aa7.85□□□□□ -1.15
PTPRM-215ENST00000583289 MTMR14Q8NCE2 650 aa7.85□□□□□ -1.15
PTPRM-215ENST00000583289 INSM2Q96T92 566 aaPredicted RBP7.85□□□□□ -1.15
PTPRM-215ENST00000583289 POLMQ9NP87 494 aaPredicted RBP7.85□□□□□ -1.15
PTPRM-215ENST00000583289 CTSOP43234 321 aaPredicted RBP7.84□□□□□ -1.15
PTPRM-215ENST00000583289 ZNF395Q9H8N7 513 aaPredicted RBP7.84□□□□□ -1.15
PTPRM-215ENST00000583289 GIGYF1O75420 1035 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-215ENST00000583289 PTGIRP43119 386 aa7.83□□□□□ -1.16
PTPRM-215ENST00000583289 RNF217Q8TC41 542 aa7.83□□□□□ -1.16
PTPRM-215ENST00000583289 CYLDQ9NQC7 956 aa7.83□□□□□ -1.16
PTPRM-215ENST00000583289 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
PTPRM-215ENST00000583289 ZCCHC6Q5VYS8 1495 aaKnown RBP7.81□□□□□ -1.16
PTPRM-215ENST00000583289 SLC35F4A4IF30 521 aa7.81□□□□□ -1.16
PTPRM-215ENST00000583289 ADD1P35611 737 aaKnown RBP7.81□□□□□ -1.16
PTPRM-215ENST00000583289 PRM3Q9NNZ6 103 aa7.81□□□□□ -1.16
PTPRM-215ENST00000583289 ATP5J2-PTCD1G3V325 749 aa7.8□□□□□ -1.16
PTPRM-215ENST00000583289 GPR37L1O60883 481 aa7.8□□□□□ -1.16
PTPRM-215ENST00000583289 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
PTPRM-215ENST00000583289 KDF1Q8NAX2 398 aaPredicted RBP7.8□□□□□ -1.16
PTPRM-215ENST00000583289 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
PTPRM-215ENST00000583289 SNRKQ9NRH2 765 aa7.8□□□□□ -1.16
PTPRM-215ENST00000583289 ERVK-9P63128 1117 aa7.79□□□□□ -1.16
PTPRM-215ENST00000583289 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
PTPRM-215ENST00000583289 CC2D2BQ6DHV5 1058 aa7.79□□□□□ -1.16
PTPRM-215ENST00000583289 ITGA6P23229 1130 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms