RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 COL22A1Q8NFW1 1626 aaPredicted RBP19.43■□□□□ 0.7
SENP3-208ENST00000583277 HOXC9P31274 260 aa19.43■□□□□ 0.7
SENP3-208ENST00000583277 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
SENP3-208ENST00000583277 EIF4A2Q14240 407 aaKnown RBP19.42■□□□□ 0.7
SENP3-208ENST00000583277 HSP90AB2PQ58FF8 381 aa19.42■□□□□ 0.7
SENP3-208ENST00000583277 ARHGEF25Q86VW2 580 aa19.42■□□□□ 0.7
SENP3-208ENST00000583277 LRRC59Q96AG4 307 aaKnown RBP19.42■□□□□ 0.7
SENP3-208ENST00000583277 IP6K1Q92551 441 aa19.41■□□□□ 0.7
SENP3-208ENST00000583277 CPDO75976 1380 aa19.4■□□□□ 0.7
SENP3-208ENST00000583277 RUNDC1Q96C34 613 aa19.4■□□□□ 0.7
SENP3-208ENST00000583277 NGEFQ8N5V2 710 aa19.4■□□□□ 0.7
SENP3-208ENST00000583277 FCHSD2O94868 740 aa19.39■□□□□ 0.69
SENP3-208ENST00000583277 PIP4K2BP78356 416 aa19.39■□□□□ 0.69
SENP3-208ENST00000583277 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
SENP3-208ENST00000583277 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
SENP3-208ENST00000583277 COL18A1P39060 1754 aa19.38■□□□□ 0.69
SENP3-208ENST00000583277 MAPK8IP3Q9UPT6 1336 aa19.37■□□□□ 0.69
SENP3-208ENST00000583277 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
SENP3-208ENST00000583277 FAM208AQ9UK61 1670 aaKnown RBP19.36■□□□□ 0.69
SENP3-208ENST00000583277 RGPD5Q99666 1765 aa19.36■□□□□ 0.69
SENP3-208ENST00000583277 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
SENP3-208ENST00000583277 NEFMP07197 916 aa19.36■□□□□ 0.69
SENP3-208ENST00000583277 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
SENP3-208ENST00000583277 ZC3H6P61129 1189 aaKnown RBP19.36■□□□□ 0.69
SENP3-208ENST00000583277 RSPH6AQ9H0K4 717 aa19.36■□□□□ 0.69
SENP3-208ENST00000583277 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
SENP3-208ENST00000583277 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
SENP3-208ENST00000583277 APAF1O14727 1248 aa19.34■□□□□ 0.69
SENP3-208ENST00000583277 PLEKHF1Q96S99 279 aa19.34■□□□□ 0.69
SENP3-208ENST00000583277 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.69
SENP3-208ENST00000583277 CAMTA1Q9Y6Y1 1673 aa19.33■□□□□ 0.69
SENP3-208ENST00000583277 KDRP35968 1356 aa19.33■□□□□ 0.68
SENP3-208ENST00000583277 PRKAR2BP31323 418 aa19.32■□□□□ 0.68
SENP3-208ENST00000583277 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
SENP3-208ENST00000583277 HMOX1P09601 288 aa19.32■□□□□ 0.68
SENP3-208ENST00000583277 TCP11L2Q8N4U5 519 aa19.32■□□□□ 0.68
SENP3-208ENST00000583277 SULT6B1Q6IMI4 303 aa19.31■□□□□ 0.68
SENP3-208ENST00000583277 EYA1Q99502 592 aa19.31■□□□□ 0.68
SENP3-208ENST00000583277 RGPD2P0DJD1 1756 aa19.31■□□□□ 0.68
SENP3-208ENST00000583277 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
SENP3-208ENST00000583277 LTV1Q96GA3 475 aaPredicted RBP19.3■□□□□ 0.68
SENP3-208ENST00000583277 PRDM11Q9NQV5 511 aa19.3■□□□□ 0.68
SENP3-208ENST00000583277 ERBB3P21860 1342 aa19.3■□□□□ 0.68
SENP3-208ENST00000583277 ANKRD24Q8TF21 1146 aa19.29■□□□□ 0.68
SENP3-208ENST00000583277 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
SENP3-208ENST00000583277 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
SENP3-208ENST00000583277 COL14A1Q05707 1796 aaKnown RBP19.28■□□□□ 0.68
SENP3-208ENST00000583277 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
SENP3-208ENST00000583277 CCDC27Q2M243 656 aa19.27■□□□□ 0.68
SENP3-208ENST00000583277 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
SENP3-208ENST00000583277 AXIN2Q9Y2T1 843 aa19.27■□□□□ 0.68
SENP3-208ENST00000583277 ZNF521Q96K83 1311 aa19.26■□□□□ 0.67
SENP3-208ENST00000583277 TMPOP42166 694 aaKnown RBP19.26■□□□□ 0.67
SENP3-208ENST00000583277 CHRNA2Q15822 529 aa19.26■□□□□ 0.67
SENP3-208ENST00000583277 DLG5Q8TDM6 1919 aa19.25■□□□□ 0.67
SENP3-208ENST00000583277 JCADQ9P266 1359 aa19.25■□□□□ 0.67
SENP3-208ENST00000583277 NFE2L2Q16236 605 aa19.24■□□□□ 0.67
SENP3-208ENST00000583277 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
SENP3-208ENST00000583277 COL5A2P05997 1499 aaPredicted RBP19.24■□□□□ 0.67
SENP3-208ENST00000583277 NBPF6Q5VWK0 638 aa19.23■□□□□ 0.67
SENP3-208ENST00000583277 NBPF4Q96M43 638 aa19.23■□□□□ 0.67
SENP3-208ENST00000583277 RRP7AQ9Y3A4 280 aaKnown RBP19.23■□□□□ 0.67
SENP3-208ENST00000583277 NEUROD2Q15784 382 aa19.23■□□□□ 0.67
SENP3-208ENST00000583277 PHACTR3Q96KR7 559 aa19.23■□□□□ 0.67
SENP3-208ENST00000583277 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
SENP3-208ENST00000583277 WWC1Q8IX03 1113 aa19.22■□□□□ 0.67
SENP3-208ENST00000583277 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
SENP3-208ENST00000583277 CSB-PGBD3P0DP91 1061 aa19.21■□□□□ 0.67
SENP3-208ENST00000583277 RIPK4P57078 832 aa19.21■□□□□ 0.67
SENP3-208ENST00000583277 LMOD3Q0VAK6 560 aa19.21■□□□□ 0.67
SENP3-208ENST00000583277 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
SENP3-208ENST00000583277 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
SENP3-208ENST00000583277 WDR63Q8IWG1 891 aa19.19■□□□□ 0.66
SENP3-208ENST00000583277 USHBP1Q8N6Y0 703 aa19.19■□□□□ 0.66
SENP3-208ENST00000583277 GAS2L2Q8NHY3 880 aa19.19■□□□□ 0.66
SENP3-208ENST00000583277 FAM83GA6ND36 823 aa19.19■□□□□ 0.66
SENP3-208ENST00000583277 NLRP2Q9NX02 1062 aa19.19■□□□□ 0.66
SENP3-208ENST00000583277 NWD2Q9ULI1 1742 aa19.18■□□□□ 0.66
SENP3-208ENST00000583277 SPATA31A6Q5VVP1 1343 aa19.17■□□□□ 0.66
SENP3-208ENST00000583277 E9PSI1 815 aa19.17■□□□□ 0.66
SENP3-208ENST00000583277 TRIM35Q9UPQ4 493 aa19.17■□□□□ 0.66
SENP3-208ENST00000583277 CALD1Q05682 793 aaKnown RBP19.16■□□□□ 0.66
SENP3-208ENST00000583277 PARP4Q9UKK3 1724 aaKnown RBP19.16■□□□□ 0.66
SENP3-208ENST00000583277 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
SENP3-208ENST00000583277 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
SENP3-208ENST00000583277 IL16Q14005 1332 aa19.15■□□□□ 0.66
SENP3-208ENST00000583277 EVA1CP58658 441 aa19.15■□□□□ 0.66
SENP3-208ENST00000583277 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
SENP3-208ENST00000583277 HSPA1LP34931 641 aa19.14■□□□□ 0.65
SENP3-208ENST00000583277 MTHFSDQ2M296 383 aaKnown RBP19.14■□□□□ 0.65
SENP3-208ENST00000583277 AMOTQ4VCS5 1084 aa19.14■□□□□ 0.65
SENP3-208ENST00000583277 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
SENP3-208ENST00000583277 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
SENP3-208ENST00000583277 BTG4Q9NY30 223 aa19.14■□□□□ 0.65
SENP3-208ENST00000583277 CRB1P82279 1406 aa19.14■□□□□ 0.65
SENP3-208ENST00000583277 NUTM2BA6NNL0 878 aaPredicted RBP19.13■□□□□ 0.65
SENP3-208ENST00000583277 NUTM2EB1AL46 878 aaPredicted RBP19.13■□□□□ 0.65
SENP3-208ENST00000583277 ADAMTS2O95450 1211 aa19.13■□□□□ 0.65
SENP3-208ENST00000583277 PKD1L3Q7Z443 1732 aa19.13■□□□□ 0.65
SENP3-208ENST00000583277 NUTM2AQ8IVF1 878 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms