RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
SREBF1-221ENST00000583080 WDR17Q8IZU2 1322 aa23.32■■□□□ 1.32
SREBF1-221ENST00000583080 C11orf95C9JLR9 678 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-221ENST00000583080 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
SREBF1-221ENST00000583080 SPON1Q9HCB6 807 aa23.31■■□□□ 1.32
SREBF1-221ENST00000583080 KCNQ2O43526 872 aa23.3■■□□□ 1.32
SREBF1-221ENST00000583080 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
SREBF1-221ENST00000583080 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-221ENST00000583080 PPP1R1BQ9UD71 204 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-221ENST00000583080 TTC21BQ7Z4L5 1316 aa23.29■■□□□ 1.32
SREBF1-221ENST00000583080 NFAT5O94916 1531 aa23.28■■□□□ 1.32
SREBF1-221ENST00000583080 PLSCR1O15162 318 aa23.28■■□□□ 1.32
SREBF1-221ENST00000583080 SOX12O15370 315 aa23.28■■□□□ 1.32
SREBF1-221ENST00000583080 ARHGEF25Q86VW2 580 aa23.27■■□□□ 1.32
SREBF1-221ENST00000583080 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
SREBF1-221ENST00000583080 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.31
SREBF1-221ENST00000583080 BCL9O00512 1426 aa23.25■■□□□ 1.31
SREBF1-221ENST00000583080 YY1P25490 414 aa23.25■■□□□ 1.31
SREBF1-221ENST00000583080 PDGFDQ9GZP0 370 aaPredicted RBP23.25■■□□□ 1.31
SREBF1-221ENST00000583080 PROM2Q8N271 834 aa23.24■■□□□ 1.31
SREBF1-221ENST00000583080 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
SREBF1-221ENST00000583080 MON2Q7Z3U7 1717 aa23.22■■□□□ 1.31
SREBF1-221ENST00000583080 CSB-PGBD3P0DP91 1061 aa23.22■■□□□ 1.31
SREBF1-221ENST00000583080 KCNH5Q8NCM2 988 aa23.22■■□□□ 1.31
SREBF1-221ENST00000583080 SIN3AQ96ST3 1273 aa23.22■■□□□ 1.31
SREBF1-221ENST00000583080 CDCA7Q9BWT1 371 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-221ENST00000583080 CARD10Q9BWT7 1032 aa23.22■■□□□ 1.31
SREBF1-221ENST00000583080 MYOM1P52179 1685 aa23.22■■□□□ 1.31
SREBF1-221ENST00000583080 TTC21AQ8NDW8 1320 aa23.21■■□□□ 1.31
SREBF1-221ENST00000583080 ABCC6O95255 1503 aa23.2■■□□□ 1.3
SREBF1-221ENST00000583080 TNS2Q63HR2 1409 aa23.2■■□□□ 1.3
SREBF1-221ENST00000583080 ZNF692Q9BU19 519 aaPredicted RBP23.2■■□□□ 1.3
SREBF1-221ENST00000583080 KTN1Q86UP2 1357 aaKnown RBP23.19■■□□□ 1.3
SREBF1-221ENST00000583080 ZBTB7AO95365 584 aa23.18■■□□□ 1.3
SREBF1-221ENST00000583080 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
SREBF1-221ENST00000583080 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
SREBF1-221ENST00000583080 USP54Q70EL1 1684 aa23.17■■□□□ 1.3
SREBF1-221ENST00000583080 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
SREBF1-221ENST00000583080 CD163L1Q9NR16 1453 aa23.15■■□□□ 1.3
SREBF1-221ENST00000583080 EXOC5O00471 708 aa23.14■■□□□ 1.29
SREBF1-221ENST00000583080 PTGER2P43116 358 aa23.14■■□□□ 1.29
SREBF1-221ENST00000583080 NEUROD1Q13562 356 aa23.14■■□□□ 1.29
SREBF1-221ENST00000583080 LTN1O94822 1766 aa23.14■■□□□ 1.29
SREBF1-221ENST00000583080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.13■■□□□ 1.29
SREBF1-221ENST00000583080 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
SREBF1-221ENST00000583080 USP31Q70CQ4 1352 aa23.13■■□□□ 1.29
SREBF1-221ENST00000583080 NME9Q86XW9 330 aa23.12■■□□□ 1.29
SREBF1-221ENST00000583080 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-221ENST00000583080 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
SREBF1-221ENST00000583080 PAPPAQ13219 1627 aa23.11■■□□□ 1.29
SREBF1-221ENST00000583080 ERBB3P21860 1342 aa23.11■■□□□ 1.29
SREBF1-221ENST00000583080 DCAF8L1A6NGE4 600 aa23.11■■□□□ 1.29
SREBF1-221ENST00000583080 SLC15A2Q16348 729 aa23.11■■□□□ 1.29
SREBF1-221ENST00000583080 ACSBG1Q96GR2 724 aa23.1■■□□□ 1.29
SREBF1-221ENST00000583080 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
SREBF1-221ENST00000583080 BTAF1O14981 1849 aa23.08■■□□□ 1.28
SREBF1-221ENST00000583080 FHDC1Q9C0D6 1143 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-221ENST00000583080 IL2RBP14784 551 aa23.04■■□□□ 1.28
SREBF1-221ENST00000583080 ANKRD24Q8TF21 1146 aa23.04■■□□□ 1.28
SREBF1-221ENST00000583080 SGIP1Q9BQI5 828 aa23.04■■□□□ 1.28
SREBF1-221ENST00000583080 MTFR1LQ9H019 292 aa23.04■■□□□ 1.28
SREBF1-221ENST00000583080 TMC1Q8TDI8 760 aa23.03■■□□□ 1.28
SREBF1-221ENST00000583080 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
SREBF1-221ENST00000583080 EDC4Q6P2E9 1401 aaKnown RBP23.02■■□□□ 1.28
SREBF1-221ENST00000583080 SYT17Q9BSW7 474 aa23.02■■□□□ 1.28
SREBF1-221ENST00000583080 SLC12A5Q9H2X9 1139 aa23.02■■□□□ 1.28
SREBF1-221ENST00000583080 ZNF827Q17R98 1081 aa23.01■■□□□ 1.27
SREBF1-221ENST00000583080 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
SREBF1-221ENST00000583080 HDGFL2Q7Z4V5 671 aaPredicted RBP22.99■■□□□ 1.27
SREBF1-221ENST00000583080 UTRNP46939 3433 aa22.99■■□□□ 1.27
SREBF1-221ENST00000583080 LRRC4BQ9NT99 713 aa22.98■■□□□ 1.27
SREBF1-221ENST00000583080 FAM208AQ9UK61 1670 aaKnown RBP22.97■■□□□ 1.27
SREBF1-221ENST00000583080 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
SREBF1-221ENST00000583080 KAT6BQ8WYB5 2073 aa22.96■■□□□ 1.27
SREBF1-221ENST00000583080 LTV1Q96GA3 475 aaPredicted RBP22.94■■□□□ 1.26
SREBF1-221ENST00000583080 ARXQ96QS3 562 aa22.94■■□□□ 1.26
SREBF1-221ENST00000583080 TERF2IPQ9NYB0 399 aa22.93■■□□□ 1.26
SREBF1-221ENST00000583080 DOT1LQ8TEK3 1739 aa22.93■■□□□ 1.26
SREBF1-221ENST00000583080 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
SREBF1-221ENST00000583080 TUBGCP6Q96RT7 1819 aa22.92■■□□□ 1.26
SREBF1-221ENST00000583080 QSER1Q2KHR3 1735 aa22.92■■□□□ 1.26
SREBF1-221ENST00000583080 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
SREBF1-221ENST00000583080 IP6K1Q92551 441 aa22.92■■□□□ 1.26
SREBF1-221ENST00000583080 CHD4Q14839 1912 aa22.91■■□□□ 1.26
SREBF1-221ENST00000583080 DDX54Q8TDD1 881 aaKnown RBP22.91■■□□□ 1.26
SREBF1-221ENST00000583080 AKT1S1Q96B36 256 aa22.91■■□□□ 1.26
SREBF1-221ENST00000583080 RGPD2P0DJD1 1756 aa22.9■■□□□ 1.26
SREBF1-221ENST00000583080 NSD2O96028 1365 aa22.89■■□□□ 1.25
SREBF1-221ENST00000583080 COL24A1Q17RW2 1714 aa22.88■■□□□ 1.25
SREBF1-221ENST00000583080 MEGF6O75095 1541 aa22.88■■□□□ 1.25
SREBF1-221ENST00000583080 MAP3K19Q56UN5 1328 aa22.88■■□□□ 1.25
SREBF1-221ENST00000583080 KCNQ4P56696 695 aa22.88■■□□□ 1.25
SREBF1-221ENST00000583080 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
SREBF1-221ENST00000583080 PNPLA7Q6ZV29 1317 aa22.87■■□□□ 1.25
SREBF1-221ENST00000583080 FBLN1P23142 703 aa22.87■■□□□ 1.25
SREBF1-221ENST00000583080 LY75O60449 1722 aa22.86■■□□□ 1.25
SREBF1-221ENST00000583080 HOXC9P31274 260 aa22.86■■□□□ 1.25
SREBF1-221ENST00000583080 SLC27A3Q5K4L6 730 aa22.86■■□□□ 1.25
SREBF1-221ENST00000583080 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
SREBF1-221ENST00000583080 TESK2Q96S53 571 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms