RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	PLEKHH1	Q9ULM0	1364 aa		10.98	□□□□□ -0.65
NF1-222	ENST00000582892	TNS3	Q68CZ2	1445 aa		10.98	□□□□□ -0.65
NF1-222	ENST00000582892	ADGRB2	O60241	1585 aa		10.98	□□□□□ -0.65
NF1-222	ENST00000582892	FAM83G	A6ND36	823 aa		10.97	□□□□□ -0.65
NF1-222	ENST00000582892	PLCG2	P16885	1265 aa		10.97	□□□□□ -0.65
NF1-222	ENST00000582892	HAP1	P54257	671 aa	Predicted RBP	10.97	□□□□□ -0.65
NF1-222	ENST00000582892	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.97	□□□□□ -0.65
NF1-222	ENST00000582892	CCDC144A	A2RUR9	1427 aa		10.96	□□□□□ -0.65
NF1-222	ENST00000582892	TRIM37	O94972	964 aa		10.96	□□□□□ -0.65
NF1-222	ENST00000582892	KRT28	Q7Z3Y7	464 aa		10.96	□□□□□ -0.65
NF1-222	ENST00000582892	EFCAB3	Q8N7B9	438 aa		10.95	□□□□□ -0.66
NF1-222	ENST00000582892	OCEL1	Q9H607	264 aa		10.95	□□□□□ -0.66
NF1-222	ENST00000582892	CRYBG1	Q9Y4K1	1723 aa		10.95	□□□□□ -0.66
NF1-222	ENST00000582892	MYOM1	P52179	1685 aa		10.95	□□□□□ -0.66
NF1-222	ENST00000582892	NRK	Q7Z2Y5	1582 aa		10.94	□□□□□ -0.66
NF1-222	ENST00000582892	LRPPRC	P42704	1394 aa	Known RBP	10.94	□□□□□ -0.66
NF1-222	ENST00000582892	LMOD2	Q6P5Q4	547 aa		10.94	□□□□□ -0.66
NF1-222	ENST00000582892	RYDEN	Q9NUL5	291 aa	Known RBP	10.94	□□□□□ -0.66
NF1-222	ENST00000582892	BTG4	Q9NY30	223 aa		10.94	□□□□□ -0.66
NF1-222	ENST00000582892	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.94	□□□□□ -0.66	8e-8	■■■□□ 14.9
NF1-222	ENST00000582892	STK26	Q9P289	416 aa		10.94	□□□□□ -0.66
NF1-222	ENST00000582892	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.94	□□□□□ -0.66
NF1-222	ENST00000582892	COL14A1	Q05707	1796 aa	Known RBP	10.94	□□□□□ -0.66
NF1-222	ENST00000582892	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.94	□□□□□ -0.66
NF1-222	ENST00000582892	CHD4	Q14839	1912 aa		10.94	□□□□□ -0.66
NF1-222	ENST00000582892	KNDC1	Q76NI1	1749 aa		10.93	□□□□□ -0.66
NF1-222	ENST00000582892	CASZ1	Q86V15	1759 aa		10.93	□□□□□ -0.66
NF1-222	ENST00000582892	NINL	Q9Y2I6	1382 aa		10.92	□□□□□ -0.66
NF1-222	ENST00000582892	ALS2	Q96Q42	1657 aa		10.92	□□□□□ -0.66
NF1-222	ENST00000582892	APBA3	O96018	575 aa		10.92	□□□□□ -0.66
NF1-222	ENST00000582892	SPATA31A5	Q5VU36	1347 aa		10.91	□□□□□ -0.66
NF1-222	ENST00000582892	SPATA31A7	Q8IWB4	1347 aa		10.91	□□□□□ -0.66
NF1-222	ENST00000582892	NLRP6	P59044	892 aa		10.91	□□□□□ -0.66
NF1-222	ENST00000582892	IRX5	P78411	483 aa	Predicted RBP	10.91	□□□□□ -0.66
NF1-222	ENST00000582892	ROCK1	Q13464	1354 aa		10.9	□□□□□ -0.66
NF1-222	ENST00000582892	KCNQ2	O43526	872 aa		10.9	□□□□□ -0.66
NF1-222	ENST00000582892	C1QTNF8	P60827	252 aa		10.9	□□□□□ -0.66
NF1-222	ENST00000582892	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.9	□□□□□ -0.66
NF1-222	ENST00000582892	SPON1	Q9HCB6	807 aa		10.9	□□□□□ -0.66
NF1-222	ENST00000582892	TECPR2	O15040	1411 aa		10.9	□□□□□ -0.66
NF1-222	ENST00000582892	NRXN1	Q9ULB1	1477 aa		10.89	□□□□□ -0.67
NF1-222	ENST00000582892	ITGAE	P38570	1179 aa		10.89	□□□□□ -0.67
NF1-222	ENST00000582892	TMEM132E	Q6IEE7	984 aa		10.89	□□□□□ -0.67
NF1-222	ENST00000582892	ADGRF5	Q8IZF2	1346 aa		10.88	□□□□□ -0.67
NF1-222	ENST00000582892	PHF8	Q9UPP1	1060 aa		10.88	□□□□□ -0.67
NF1-222	ENST00000582892	SBNO1	A3KN83	1393 aa		10.88	□□□□□ -0.67
NF1-222	ENST00000582892		G3V3G9	751 aa		10.87	□□□□□ -0.67
NF1-222	ENST00000582892	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.87	□□□□□ -0.67
NF1-222	ENST00000582892	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.87	□□□□□ -0.67
NF1-222	ENST00000582892	ARHGEF10	O15013	1369 aa		10.87	□□□□□ -0.67
NF1-222	ENST00000582892	PARD3	Q8TEW0	1356 aa		10.87	□□□□□ -0.67
NF1-222	ENST00000582892	PMFBP1	Q8TBY8	1022 aa		10.86	□□□□□ -0.67
NF1-222	ENST00000582892	SBF2	Q86WG5	1849 aa		10.86	□□□□□ -0.67
NF1-222	ENST00000582892	FAM196A	Q6ZSG2	479 aa		10.85	□□□□□ -0.67
NF1-222	ENST00000582892	BBX	Q8WY36	941 aa	Predicted RBP	10.85	□□□□□ -0.67
NF1-222	ENST00000582892	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.85	□□□□□ -0.67
NF1-222	ENST00000582892	SPATA31A1	Q5TZJ5	1347 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	RRBP1	Q9P2E9	1410 aa	Known RBP	10.84	□□□□□ -0.67
NF1-222	ENST00000582892	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.84	□□□□□ -0.67
NF1-222	ENST00000582892	ZBTB7A	O95365	584 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	PSME1	Q06323	249 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	CHRNA2	Q15822	529 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	NBPF8	Q3BBV2	869 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	NBPF14	Q5TI25	921 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	MAMSTR	Q6ZN01	415 aa		10.84	□□□□□ -0.67
NF1-222	ENST00000582892	CCER1	Q8TC90	406 aa	Predicted RBP	10.84	□□□□□ -0.67
NF1-222	ENST00000582892	COLQ	Q9Y215	455 aa	Predicted RBP	10.84	□□□□□ -0.67
NF1-222	ENST00000582892	ABCC11	Q96J66	1382 aa		10.83	□□□□□ -0.68
NF1-222	ENST00000582892	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
NF1-222	ENST00000582892	USP35	Q9P2H5	1018 aa		10.83	□□□□□ -0.68
NF1-222	ENST00000582892	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.83	□□□□□ -0.68
NF1-222	ENST00000582892	PEAK1	Q9H792	1746 aa		10.82	□□□□□ -0.68
NF1-222	ENST00000582892	PTGER2	P43116	358 aa		10.82	□□□□□ -0.68
NF1-222	ENST00000582892	PDCD7	Q8N8D1	485 aa	Known RBP	10.82	□□□□□ -0.68
NF1-222	ENST00000582892	STRN4	Q9NRL3	753 aa		10.82	□□□□□ -0.68
NF1-222	ENST00000582892	PLSCR2	Q9NRY7	297 aa		10.82	□□□□□ -0.68
NF1-222	ENST00000582892	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.82	□□□□□ -0.68
NF1-222	ENST00000582892	RGPD4	Q7Z3J3	1758 aa		10.82	□□□□□ -0.68
NF1-222	ENST00000582892	POTEF	A5A3E0	1075 aa		10.81	□□□□□ -0.68
NF1-222	ENST00000582892	PTF1A	Q7RTS3	328 aa		10.81	□□□□□ -0.68
NF1-222	ENST00000582892	MFRP	Q9BY79	579 aa		10.81	□□□□□ -0.68
NF1-222	ENST00000582892	PRDM11	Q9NQV5	511 aa		10.81	□□□□□ -0.68
NF1-222	ENST00000582892	RPGRIP1L	Q68CZ1	1315 aa		10.81	□□□□□ -0.68
NF1-222	ENST00000582892	SHANK3	Q9BYB0	1731 aa		10.81	□□□□□ -0.68
NF1-222	ENST00000582892	KIAA0232	Q92628	1395 aa		10.8	□□□□□ -0.68
NF1-222	ENST00000582892	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.8	□□□□□ -0.68
NF1-222	ENST00000582892	PARP4	Q9UKK3	1724 aa	Known RBP	10.8	□□□□□ -0.68
NF1-222	ENST00000582892	SYT17	Q9BSW7	474 aa		10.79	□□□□□ -0.68
NF1-222	ENST00000582892	SCUBE2	Q9NQ36	999 aa		10.79	□□□□□ -0.68
NF1-222	ENST00000582892	PIK3C2G	O75747	1445 aa		10.78	□□□□□ -0.68
NF1-222	ENST00000582892	PDE3B	Q13370	1112 aa		10.78	□□□□□ -0.68
NF1-222	ENST00000582892	FBXO22	Q8NEZ5	403 aa		10.78	□□□□□ -0.68
NF1-222	ENST00000582892	PRR36	Q9H6K5	1346 aa		10.78	□□□□□ -0.68
NF1-222	ENST00000582892	LRRC37A3	O60309	1634 aa		10.77	□□□□□ -0.68
NF1-222	ENST00000582892	SSH2	Q76I76	1423 aa		10.77	□□□□□ -0.68
NF1-222	ENST00000582892	LMO7	Q8WWI1	1683 aa		10.77	□□□□□ -0.69
NF1-222	ENST00000582892	RGL3	Q3MIN7	710 aa		10.77	□□□□□ -0.69
NF1-222	ENST00000582892	ACIN1	Q9UKV3	1341 aa	Known RBP	10.77	□□□□□ -0.69
NF1-222	ENST00000582892	DLC1	Q96QB1	1528 aa		10.76	□□□□□ -0.69
NF1-222	ENST00000582892	GIGYF1	O75420	1035 aa	Predicted RBP	10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms