RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 SYT17Q9BSW7 474 aa22.25■■□□□ 1.15
IFT20-212ENST00000582797 NLRP13Q86W25 1043 aa22.24■■□□□ 1.15
IFT20-212ENST00000582797 C1QTNF8P60827 252 aa22.23■■□□□ 1.15
IFT20-212ENST00000582797 MARCH10Q8NA82 808 aaPredicted RBP22.23■■□□□ 1.15
IFT20-212ENST00000582797 SLIT3O75094 1523 aa22.22■■□□□ 1.15
IFT20-212ENST00000582797 PPIP5K1Q6PFW1 1433 aa22.21■■□□□ 1.15
IFT20-212ENST00000582797 TXNRD1Q16881 649 aa22.2■■□□□ 1.14
IFT20-212ENST00000582797 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
IFT20-212ENST00000582797 STK32BQ9NY57 414 aa22.2■■□□□ 1.14
IFT20-212ENST00000582797 AATKQ6ZMQ8 1374 aa22.2■■□□□ 1.14
IFT20-212ENST00000582797 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
IFT20-212ENST00000582797 SLC15A2Q16348 729 aa22.19■■□□□ 1.14
IFT20-212ENST00000582797 BCL9O00512 1426 aa22.18■■□□□ 1.14
IFT20-212ENST00000582797 SGIP1Q9BQI5 828 aa22.18■■□□□ 1.14
IFT20-212ENST00000582797 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
IFT20-212ENST00000582797 CEP350Q5VT06 3117 aa22.17■■□□□ 1.14
IFT20-212ENST00000582797 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
IFT20-212ENST00000582797 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
IFT20-212ENST00000582797 MTFR1LQ9H019 292 aa22.16■■□□□ 1.14
IFT20-212ENST00000582797 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
IFT20-212ENST00000582797 WDR17Q8IZU2 1322 aa22.15■■□□□ 1.14
IFT20-212ENST00000582797 AXIN2Q9Y2T1 843 aa22.15■■□□□ 1.14
IFT20-212ENST00000582797 QRICH2Q9H0J4 1663 aa22.14■■□□□ 1.14
IFT20-212ENST00000582797 NLRP6P59044 892 aa22.14■■□□□ 1.13
IFT20-212ENST00000582797 IFFO2Q5TF58 517 aa22.14■■□□□ 1.13
IFT20-212ENST00000582797 GOLGB1Q14789 3259 aaKnown RBP22.13■■□□□ 1.13
IFT20-212ENST00000582797 SRPK2P78362 688 aaKnown RBP22.13■■□□□ 1.13
IFT20-212ENST00000582797 STAC3Q96MF2 364 aa22.13■■□□□ 1.13
IFT20-212ENST00000582797 USP6P35125 1406 aa22.13■■□□□ 1.13
IFT20-212ENST00000582797 CABP2Q9NPB3 220 aa22.12■■□□□ 1.13
IFT20-212ENST00000582797 BTAF1O14981 1849 aa22.11■■□□□ 1.13
IFT20-212ENST00000582797 ARXQ96QS3 562 aa22.11■■□□□ 1.13
IFT20-212ENST00000582797 CPSF1Q10570 1443 aaKnown RBP22.11■■□□□ 1.13
IFT20-212ENST00000582797 BRD4O60885 1362 aaPredicted RBP22.11■■□□□ 1.13
IFT20-212ENST00000582797 CDCA7Q9BWT1 371 aaPredicted RBP22.1■■□□□ 1.13
IFT20-212ENST00000582797 MAP3K5Q99683 1374 aa22.09■■□□□ 1.13
IFT20-212ENST00000582797 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
IFT20-212ENST00000582797 SHANK3Q9BYB0 1731 aa22.08■■□□□ 1.12
IFT20-212ENST00000582797 KAT6BQ8WYB5 2073 aa22.07■■□□□ 1.12
IFT20-212ENST00000582797 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
IFT20-212ENST00000582797 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
IFT20-212ENST00000582797 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
IFT20-212ENST00000582797 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
IFT20-212ENST00000582797 GPR162Q16538 588 aa22.05■■□□□ 1.12
IFT20-212ENST00000582797 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
IFT20-212ENST00000582797 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
IFT20-212ENST00000582797 QSER1Q2KHR3 1735 aa22.05■■□□□ 1.12
IFT20-212ENST00000582797 TUBGCP6Q96RT7 1819 aa22.04■■□□□ 1.12
IFT20-212ENST00000582797 EXOC5O00471 708 aa22.04■■□□□ 1.12
IFT20-212ENST00000582797 SOX12O15370 315 aa22.04■■□□□ 1.12
IFT20-212ENST00000582797 CSB-PGBD3P0DP91 1061 aa22.04■■□□□ 1.12
IFT20-212ENST00000582797 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
IFT20-212ENST00000582797 ABCC6O95255 1503 aa22.04■■□□□ 1.12
IFT20-212ENST00000582797 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
IFT20-212ENST00000582797 ZNF827Q17R98 1081 aa22.03■■□□□ 1.12
IFT20-212ENST00000582797 ARHGEF25Q86VW2 580 aa22.03■■□□□ 1.12
IFT20-212ENST00000582797 NFAT5O94916 1531 aa22.02■■□□□ 1.12
IFT20-212ENST00000582797 KLHL34Q8N239 644 aa22.02■■□□□ 1.12
IFT20-212ENST00000582797 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
IFT20-212ENST00000582797 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
IFT20-212ENST00000582797 LTN1O94822 1766 aa21.98■■□□□ 1.11
IFT20-212ENST00000582797 LRRC4BQ9NT99 713 aa21.97■■□□□ 1.11
IFT20-212ENST00000582797 KCNH5Q8NCM2 988 aa21.96■■□□□ 1.11
IFT20-212ENST00000582797 TTC21BQ7Z4L5 1316 aa21.96■■□□□ 1.11
IFT20-212ENST00000582797 NLGN2Q8NFZ4 835 aa21.94■■□□□ 1.1
IFT20-212ENST00000582797 MON2Q7Z3U7 1717 aa21.92■■□□□ 1.1
IFT20-212ENST00000582797 AKT1S1Q96B36 256 aa21.92■■□□□ 1.1
IFT20-212ENST00000582797 PNPLA7Q6ZV29 1317 aa21.9■■□□□ 1.1
IFT20-212ENST00000582797 POLD1P28340 1107 aa21.9■■□□□ 1.1
IFT20-212ENST00000582797 USP54Q70EL1 1684 aa21.89■■□□□ 1.1
IFT20-212ENST00000582797 SLC16A10Q8TF71 515 aa21.89■■□□□ 1.09
IFT20-212ENST00000582797 LY75O60449 1722 aa21.89■■□□□ 1.09
IFT20-212ENST00000582797 ERBB3P21860 1342 aa21.88■■□□□ 1.09
IFT20-212ENST00000582797 TTC21AQ8NDW8 1320 aa21.88■■□□□ 1.09
IFT20-212ENST00000582797 YBX3P16989 372 aaKnown RBP eCLIP21.88■■□□□ 1.09
IFT20-212ENST00000582797 NLRP2Q9NX02 1062 aa21.88■■□□□ 1.09
IFT20-212ENST00000582797 DOT1LQ8TEK3 1739 aa21.87■■□□□ 1.09
IFT20-212ENST00000582797 IL2RBP14784 551 aa21.87■■□□□ 1.09
IFT20-212ENST00000582797 EVC2Q86UK5 1308 aa21.86■■□□□ 1.09
IFT20-212ENST00000582797 KCNQ4P56696 695 aa21.86■■□□□ 1.09
IFT20-212ENST00000582797 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
IFT20-212ENST00000582797 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
IFT20-212ENST00000582797 KTN1Q86UP2 1357 aaKnown RBP21.84■■□□□ 1.09
IFT20-212ENST00000582797 TFCP2L1Q9NZI6 479 aa21.83■■□□□ 1.09
IFT20-212ENST00000582797 SLC27A3Q5K4L6 730 aa21.82■■□□□ 1.08
IFT20-212ENST00000582797 GRIN3BO60391 1043 aa21.8■■□□□ 1.08
IFT20-212ENST00000582797 ANKRD24Q8TF21 1146 aa21.8■■□□□ 1.08
IFT20-212ENST00000582797 FAM208AQ9UK61 1670 aaKnown RBP21.79■■□□□ 1.08
IFT20-212ENST00000582797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.79■■□□□ 1.08
IFT20-212ENST00000582797 USP31Q70CQ4 1352 aa21.78■■□□□ 1.08
IFT20-212ENST00000582797 DDX54Q8TDD1 881 aaKnown RBP21.78■■□□□ 1.08
IFT20-212ENST00000582797 RGPD2P0DJD1 1756 aa21.78■■□□□ 1.08
IFT20-212ENST00000582797 NME9Q86XW9 330 aa21.77■■□□□ 1.08
IFT20-212ENST00000582797 SYTL4Q96C24 671 aaPredicted RBP21.76■■□□□ 1.07
IFT20-212ENST00000582797 NSD2O96028 1365 aa21.75■■□□□ 1.07
IFT20-212ENST00000582797 C5P01031 1676 aa21.75■■□□□ 1.07
IFT20-212ENST00000582797 MSH5O43196 834 aa21.74■■□□□ 1.07
IFT20-212ENST00000582797 HSPA6P17066 643 aa21.74■■□□□ 1.07
IFT20-212ENST00000582797 MSL1Q68DK7 614 aa21.74■■□□□ 1.07
IFT20-212ENST00000582797 ZNF526Q8TF50 670 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms