RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
CDC42EP4-208ENST00000582303 PLSCR1O15162 318 aa20.71■□□□□ 0.91
CDC42EP4-208ENST00000582303 CARD10Q9BWT7 1032 aa20.7■□□□□ 0.9
CDC42EP4-208ENST00000582303 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
CDC42EP4-208ENST00000582303 AXIN2Q9Y2T1 843 aa20.69■□□□□ 0.9
CDC42EP4-208ENST00000582303 PIK3C2AO00443 1686 aa20.68■□□□□ 0.9
CDC42EP4-208ENST00000582303 SOX12O15370 315 aa20.68■□□□□ 0.9
CDC42EP4-208ENST00000582303 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
CDC42EP4-208ENST00000582303 SPON1Q9HCB6 807 aa20.67■□□□□ 0.9
CDC42EP4-208ENST00000582303 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
CDC42EP4-208ENST00000582303 BCL9O00512 1426 aa20.67■□□□□ 0.9
CDC42EP4-208ENST00000582303 EXOC5O00471 708 aa20.66■□□□□ 0.9
CDC42EP4-208ENST00000582303 HDGFL2Q7Z4V5 671 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP4-208ENST00000582303 PPP1R1BQ9UD71 204 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP4-208ENST00000582303 RREB1Q92766 1687 aa20.65■□□□□ 0.9
CDC42EP4-208ENST00000582303 ABCC6O95255 1503 aa20.65■□□□□ 0.9
CDC42EP4-208ENST00000582303 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
CDC42EP4-208ENST00000582303 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
CDC42EP4-208ENST00000582303 USP31Q70CQ4 1352 aa20.63■□□□□ 0.89
CDC42EP4-208ENST00000582303 KCNQ2O43526 872 aa20.63■□□□□ 0.89
CDC42EP4-208ENST00000582303 TMC1Q8TDI8 760 aa20.63■□□□□ 0.89
CDC42EP4-208ENST00000582303 TERF2IPQ9NYB0 399 aa20.63■□□□□ 0.89
CDC42EP4-208ENST00000582303 LRRC37A3O60309 1634 aa20.63■□□□□ 0.89
CDC42EP4-208ENST00000582303 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
CDC42EP4-208ENST00000582303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.62■□□□□ 0.89
CDC42EP4-208ENST00000582303 MARCH10Q8NA82 808 aaPredicted RBP20.62■□□□□ 0.89
CDC42EP4-208ENST00000582303 PUS7Q96PZ0 661 aaKnown RBP20.62■□□□□ 0.89
CDC42EP4-208ENST00000582303 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
CDC42EP4-208ENST00000582303 COL18A1P39060 1754 aa20.61■□□□□ 0.89
CDC42EP4-208ENST00000582303 PEAK1Q9H792 1746 aa20.6■□□□□ 0.89
CDC42EP4-208ENST00000582303 RGPD3A6NKT7 1758 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP4-208ENST00000582303 AKAP12Q02952 1782 aa20.59■□□□□ 0.89
CDC42EP4-208ENST00000582303 RGPD4Q7Z3J3 1758 aa20.59■□□□□ 0.89
CDC42EP4-208ENST00000582303 NFAT5O94916 1531 aa20.59■□□□□ 0.89
CDC42EP4-208ENST00000582303 NINLQ9Y2I6 1382 aa20.58■□□□□ 0.88
CDC42EP4-208ENST00000582303 ERBB3P21860 1342 aa20.57■□□□□ 0.88
CDC42EP4-208ENST00000582303 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
CDC42EP4-208ENST00000582303 EDC4Q6P2E9 1401 aaKnown RBP20.57■□□□□ 0.88
CDC42EP4-208ENST00000582303 NLRP2Q9NX02 1062 aa20.57■□□□□ 0.88
CDC42EP4-208ENST00000582303 NME9Q86XW9 330 aa20.56■□□□□ 0.88
CDC42EP4-208ENST00000582303 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
CDC42EP4-208ENST00000582303 IL2RBP14784 551 aa20.55■□□□□ 0.88
CDC42EP4-208ENST00000582303 TXNRD1Q16881 649 aa20.54■□□□□ 0.88
CDC42EP4-208ENST00000582303 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
CDC42EP4-208ENST00000582303 MON2Q7Z3U7 1717 aa20.53■□□□□ 0.88
CDC42EP4-208ENST00000582303 CD163L1Q9NR16 1453 aa20.52■□□□□ 0.88
CDC42EP4-208ENST00000582303 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.88
CDC42EP4-208ENST00000582303 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
CDC42EP4-208ENST00000582303 WNK3Q9BYP7 1800 aa20.51■□□□□ 0.87
CDC42EP4-208ENST00000582303 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
CDC42EP4-208ENST00000582303 PROM2Q8N271 834 aa20.51■□□□□ 0.87
CDC42EP4-208ENST00000582303 A0A1W2PP64 1363 aa20.5■□□□□ 0.87
CDC42EP4-208ENST00000582303 SLC15A2Q16348 729 aa20.5■□□□□ 0.87
CDC42EP4-208ENST00000582303 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
CDC42EP4-208ENST00000582303 USP54Q70EL1 1684 aa20.49■□□□□ 0.87
CDC42EP4-208ENST00000582303 YY1P25490 414 aa20.49■□□□□ 0.87
CDC42EP4-208ENST00000582303 IP6K1Q92551 441 aa20.48■□□□□ 0.87
CDC42EP4-208ENST00000582303 COG3Q96JB2 828 aa20.48■□□□□ 0.87
CDC42EP4-208ENST00000582303 ZBTB7AO95365 584 aa20.46■□□□□ 0.87
CDC42EP4-208ENST00000582303 RGPD5Q99666 1765 aa20.46■□□□□ 0.87
CDC42EP4-208ENST00000582303 ACSBG1Q96GR2 724 aa20.45■□□□□ 0.86
CDC42EP4-208ENST00000582303 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
CDC42EP4-208ENST00000582303 ST20-MTHFSA0A0A6YYL1 179 aa20.44■□□□□ 0.86
CDC42EP4-208ENST00000582303 TESK2Q96S53 571 aa20.43■□□□□ 0.86
CDC42EP4-208ENST00000582303 AMPHP49418 695 aa20.42■□□□□ 0.86
CDC42EP4-208ENST00000582303 SLC27A3Q5K4L6 730 aa20.41■□□□□ 0.86
CDC42EP4-208ENST00000582303 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
CDC42EP4-208ENST00000582303 NHSQ6T4R5 1651 aa20.41■□□□□ 0.86
CDC42EP4-208ENST00000582303 LTN1O94822 1766 aa20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 PTGER2P43116 358 aa20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 TMF1P82094 1093 aa20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 CDCA8Q53HL2 280 aa20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 CASZ1Q86V15 1759 aa20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-208ENST00000582303 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
CDC42EP4-208ENST00000582303 MAP3K19Q56UN5 1328 aa20.38■□□□□ 0.85
CDC42EP4-208ENST00000582303 HOXC9P31274 260 aa20.38■□□□□ 0.85
CDC42EP4-208ENST00000582303 RTL1A6NKG5 1358 aa20.37■□□□□ 0.85
CDC42EP4-208ENST00000582303 HMGB2P26583 209 aaKnown RBP20.37■□□□□ 0.85
CDC42EP4-208ENST00000582303 CGNL1Q0VF96 1302 aa20.36■□□□□ 0.85
CDC42EP4-208ENST00000582303 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
CDC42EP4-208ENST00000582303 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
CDC42EP4-208ENST00000582303 SLC16A10Q8TF71 515 aa20.35■□□□□ 0.85
CDC42EP4-208ENST00000582303 SYTL4Q96C24 671 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP4-208ENST00000582303 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
CDC42EP4-208ENST00000582303 FHDC1Q9C0D6 1143 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP4-208ENST00000582303 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
CDC42EP4-208ENST00000582303 ARXQ96QS3 562 aa20.34■□□□□ 0.85
CDC42EP4-208ENST00000582303 POLD1P28340 1107 aa20.32■□□□□ 0.84
CDC42EP4-208ENST00000582303 RAPGEF4Q8WZA2 1011 aa20.32■□□□□ 0.84
CDC42EP4-208ENST00000582303 SGIP1Q9BQI5 828 aa20.32■□□□□ 0.84
CDC42EP4-208ENST00000582303 USP47Q96K76 1375 aa20.32■□□□□ 0.84
CDC42EP4-208ENST00000582303 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
CDC42EP4-208ENST00000582303 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP4-208ENST00000582303 LRRC4BQ9NT99 713 aa20.31■□□□□ 0.84
CDC42EP4-208ENST00000582303 FYB1O15117 783 aa20.3■□□□□ 0.84
CDC42EP4-208ENST00000582303 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
CDC42EP4-208ENST00000582303 UTRNP46939 3433 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms