RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 AMPHP49418 695 aa15.5■□□□□ 0.07
GGA3-211ENST00000582232 COL3A1P02461 1466 aaPredicted RBP15.5■□□□□ 0.07
GGA3-211ENST00000582232 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
GGA3-211ENST00000582232 PRDM11Q9NQV5 511 aa15.49■□□□□ 0.07
GGA3-211ENST00000582232 LRP6O75581 1613 aa15.49■□□□□ 0.07
GGA3-211ENST00000582232 RGPD5Q99666 1765 aa15.49■□□□□ 0.07
GGA3-211ENST00000582232 FAM83GA6ND36 823 aa15.48■□□□□ 0.07
GGA3-211ENST00000582232 NUTM2BA6NNL0 878 aaPredicted RBP15.48■□□□□ 0.07
GGA3-211ENST00000582232 NUTM2EB1AL46 878 aaPredicted RBP15.48■□□□□ 0.07
GGA3-211ENST00000582232 NUTM2AQ8IVF1 878 aaPredicted RBP15.48■□□□□ 0.07
GGA3-211ENST00000582232 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
GGA3-211ENST00000582232 HSP90AB2PQ58FF8 381 aa15.47■□□□□ 0.07
GGA3-211ENST00000582232 NWD2Q9ULI1 1742 aa15.47■□□□□ 0.07
GGA3-211ENST00000582232 AXIN2Q9Y2T1 843 aa15.47■□□□□ 0.07
GGA3-211ENST00000582232 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
GGA3-211ENST00000582232 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
GGA3-211ENST00000582232 PLCH1Q4KWH8 1693 aa15.46■□□□□ 0.07
GGA3-211ENST00000582232 FAM208AQ9UK61 1670 aaKnown RBP15.45■□□□□ 0.06
GGA3-211ENST00000582232 SLIT2O94813 1529 aa15.45■□□□□ 0.06
GGA3-211ENST00000582232 ADAMTS2O95450 1211 aa15.45■□□□□ 0.06
GGA3-211ENST00000582232 CCDC184Q52MB2 194 aa15.45■□□□□ 0.06
GGA3-211ENST00000582232 ZBTB7CA1YPR0 619 aa15.44■□□□□ 0.06
GGA3-211ENST00000582232 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
GGA3-211ENST00000582232 IL13P35225 146 aa15.44■□□□□ 0.06
GGA3-211ENST00000582232 COL5A2P05997 1499 aaPredicted RBP15.44■□□□□ 0.06
GGA3-211ENST00000582232 ERBB3P21860 1342 aa15.43■□□□□ 0.06
GGA3-211ENST00000582232 RGPD1P0DJD0 1748 aa15.43■□□□□ 0.06
GGA3-211ENST00000582232 NRAPQ86VF7 1730 aa15.43■□□□□ 0.06
GGA3-211ENST00000582232 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
GGA3-211ENST00000582232 FNBP4Q8N3X1 1017 aaPredicted RBP15.43■□□□□ 0.06
GGA3-211ENST00000582232 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
GGA3-211ENST00000582232 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
GGA3-211ENST00000582232 ANKRD24Q8TF21 1146 aa15.42■□□□□ 0.06
GGA3-211ENST00000582232 NUDCQ9Y266 331 aa15.42■□□□□ 0.06
GGA3-211ENST00000582232 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.42■□□□□ 0.06
GGA3-211ENST00000582232 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
GGA3-211ENST00000582232 WDR17Q8IZU2 1322 aa15.41■□□□□ 0.06
GGA3-211ENST00000582232 NGLY1Q96IV0 654 aa15.4■□□□□ 0.06
GGA3-211ENST00000582232 NCAPD2Q15021 1401 aa15.4■□□□□ 0.06
GGA3-211ENST00000582232 RGPD2P0DJD1 1756 aa15.39■□□□□ 0.05
GGA3-211ENST00000582232 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
GGA3-211ENST00000582232 C8orf37Q96NL8 207 aa15.39■□□□□ 0.05
GGA3-211ENST00000582232 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
GGA3-211ENST00000582232 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
GGA3-211ENST00000582232 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
GGA3-211ENST00000582232 EYA1Q99502 592 aa15.38■□□□□ 0.05
GGA3-211ENST00000582232 KDRP35968 1356 aa15.37■□□□□ 0.05
GGA3-211ENST00000582232 CRB1P82279 1406 aa15.37■□□□□ 0.05
GGA3-211ENST00000582232 EVA1CP58658 441 aa15.37■□□□□ 0.05
GGA3-211ENST00000582232 LTV1Q96GA3 475 aaPredicted RBP15.37■□□□□ 0.05
GGA3-211ENST00000582232 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
GGA3-211ENST00000582232 NBPF6Q5VWK0 638 aa15.36■□□□□ 0.05
GGA3-211ENST00000582232 NBPF4Q96M43 638 aa15.36■□□□□ 0.05
GGA3-211ENST00000582232 CARD10Q9BWT7 1032 aa15.36■□□□□ 0.05
GGA3-211ENST00000582232 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
GGA3-211ENST00000582232 FCHSD2O94868 740 aa15.35■□□□□ 0.05
GGA3-211ENST00000582232 CSB-PGBD3P0DP91 1061 aa15.35■□□□□ 0.05
GGA3-211ENST00000582232 LARP1Q6PKG0 1096 aaKnown RBP15.35■□□□□ 0.05
GGA3-211ENST00000582232 AFF2P51816 1311 aa15.35■□□□□ 0.05
GGA3-211ENST00000582232 PLEKHG2Q9H7P9 1386 aa15.35■□□□□ 0.05
GGA3-211ENST00000582232 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
GGA3-211ENST00000582232 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
GGA3-211ENST00000582232 VPS72Q15906 364 aa15.34■□□□□ 0.05
GGA3-211ENST00000582232 TOM1L2Q6ZVM7 507 aa15.34■□□□□ 0.05
GGA3-211ENST00000582232 STRN4Q9NRL3 753 aa15.34■□□□□ 0.05
GGA3-211ENST00000582232 RGS17Q9UGC6 210 aaPredicted RBP15.34■□□□□ 0.05
GGA3-211ENST00000582232 USP21Q9UK80 565 aa15.34■□□□□ 0.05
GGA3-211ENST00000582232 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
GGA3-211ENST00000582232 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
GGA3-211ENST00000582232 NLRP2Q9NX02 1062 aa15.33■□□□□ 0.04
GGA3-211ENST00000582232 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
GGA3-211ENST00000582232 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
GGA3-211ENST00000582232 THRAP3Q9Y2W1 955 aaKnown RBP15.32■□□□□ 0.04
GGA3-211ENST00000582232 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
GGA3-211ENST00000582232 SPATA31A5Q5VU36 1347 aa15.32■□□□□ 0.04
GGA3-211ENST00000582232 SPATA31A7Q8IWB4 1347 aa15.32■□□□□ 0.04
GGA3-211ENST00000582232 ATRNO75882 1429 aa15.32■□□□□ 0.04
GGA3-211ENST00000582232 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
GGA3-211ENST00000582232 WNK3Q9BYP7 1800 aa15.31■□□□□ 0.04
GGA3-211ENST00000582232 HMOX1P09601 288 aa15.3■□□□□ 0.04
GGA3-211ENST00000582232 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
GGA3-211ENST00000582232 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
GGA3-211ENST00000582232 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
GGA3-211ENST00000582232 TRPC5Q9UL62 973 aaPredicted RBP15.3■□□□□ 0.04
GGA3-211ENST00000582232 DISP2A7MBM2 1401 aa15.29■□□□□ 0.04
GGA3-211ENST00000582232 TCP11L2Q8N4U5 519 aa15.29■□□□□ 0.04
GGA3-211ENST00000582232 USHBP1Q8N6Y0 703 aa15.29■□□□□ 0.04
GGA3-211ENST00000582232 PARP4Q9UKK3 1724 aaKnown RBP15.29■□□□□ 0.04
GGA3-211ENST00000582232 BARGINQ6ZT62 677 aa15.28■□□□□ 0.04
GGA3-211ENST00000582232 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
GGA3-211ENST00000582232 PRKAR2BP31323 418 aa15.27■□□□□ 0.04
GGA3-211ENST00000582232 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
GGA3-211ENST00000582232 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
GGA3-211ENST00000582232 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.04
GGA3-211ENST00000582232 CDCA7Q9BWT1 371 aaPredicted RBP15.27■□□□□ 0.04
GGA3-211ENST00000582232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.046e-7■■□□□ 11.9
GGA3-211ENST00000582232 GLI3P10071 1580 aa15.27■□□□□ 0.03
GGA3-211ENST00000582232 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
GGA3-211ENST00000582232 IL2RBP14784 551 aa15.26■□□□□ 0.03
GGA3-211ENST00000582232 QTRT2Q9H974 415 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms