RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 ZBTB7CA1YPR0 619 aa31.52■■■□□ 2.64
CASC3-207ENST00000581849 TIMELESSQ9UNS1 1208 aa31.52■■■□□ 2.64
CASC3-207ENST00000581849 PDE3BQ13370 1112 aa31.51■■■□□ 2.63
CASC3-207ENST00000581849 FAM182BQ5T319 152 aa31.51■■■□□ 2.63
CASC3-207ENST00000581849 SLC12A5Q9H2X9 1139 aa31.51■■■□□ 2.63
CASC3-207ENST00000581849 WDR17Q8IZU2 1322 aa31.5■■■□□ 2.63
CASC3-207ENST00000581849 A0A1W2PP64 1363 aa31.48■■■□□ 2.63
CASC3-207ENST00000581849 C11orf95C9JLR9 678 aaPredicted RBP31.48■■■□□ 2.63
CASC3-207ENST00000581849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.47■■■□□ 2.63
CASC3-207ENST00000581849 AXIN2Q9Y2T1 843 aa31.47■■■□□ 2.63
CASC3-207ENST00000581849 TOM1L2Q6ZVM7 507 aa31.46■■■□□ 2.63
CASC3-207ENST00000581849 WNK3Q9BYP7 1800 aa31.45■■■□□ 2.62
CASC3-207ENST00000581849 RGPD5Q99666 1765 aa31.44■■■□□ 2.62
CASC3-207ENST00000581849 CDCA7Q9BWT1 371 aaPredicted RBP31.44■■■□□ 2.62
CASC3-207ENST00000581849 USP47Q96K76 1375 aa31.43■■■□□ 2.62
CASC3-207ENST00000581849 NME9Q86XW9 330 aa31.43■■■□□ 2.62
CASC3-207ENST00000581849 SOX12O15370 315 aa31.42■■■□□ 2.62
CASC3-207ENST00000581849 LRRC37A3O60309 1634 aa31.42■■■□□ 2.62
CASC3-207ENST00000581849 PARD3Q8TEW0 1356 aa31.42■■■□□ 2.62
CASC3-207ENST00000581849 OVOS2A0A0J9YW53 1432 aa31.41■■■□□ 2.62
CASC3-207ENST00000581849 OVOS2Q6IE36 1432 aa31.41■■■□□ 2.62
CASC3-207ENST00000581849 TRIM37O94972 964 aa31.4■■■□□ 2.62
CASC3-207ENST00000581849 EN1Q05925 392 aaPredicted RBP31.4■■■□□ 2.62
CASC3-207ENST00000581849 CARD10Q9BWT7 1032 aa31.4■■■□□ 2.62
CASC3-207ENST00000581849 TMF1P82094 1093 aa31.38■■■□□ 2.61
CASC3-207ENST00000581849 OVOS2A0A0G2JMS6 1433 aa31.38■■■□□ 2.61
CASC3-207ENST00000581849 DDB1Q16531 1140 aa31.37■■■□□ 2.61
CASC3-207ENST00000581849 CCDC7Q96M83 1385 aa31.37■■■□□ 2.61
CASC3-207ENST00000581849 PEAK1Q9H792 1746 aa31.37■■■□□ 2.61
CASC3-207ENST00000581849 LTN1O94822 1766 aa31.37■■■□□ 2.61
CASC3-207ENST00000581849 ANKRD36BQ8N2N9 1353 aa31.36■■■□□ 2.61
CASC3-207ENST00000581849 CSB-PGBD3P0DP91 1061 aa31.36■■■□□ 2.61
CASC3-207ENST00000581849 SRCAPQ6ZRS2 3230 aa31.35■■■□□ 2.61
CASC3-207ENST00000581849 CAMKK2Q96RR4 588 aa31.34■■■□□ 2.61
CASC3-207ENST00000581849 CDCA8Q53HL2 280 aa31.33■■■□□ 2.61
CASC3-207ENST00000581849 ERBB3P21860 1342 aa31.32■■■□□ 2.6
CASC3-207ENST00000581849 APBA3O96018 575 aa31.32■■■□□ 2.6
CASC3-207ENST00000581849 BCL9O00512 1426 aa31.32■■■□□ 2.6
CASC3-207ENST00000581849 PCGF6Q9BYE7 350 aa31.31■■■□□ 2.6
CASC3-207ENST00000581849 EZH2Q15910 746 aaKnown RBP31.3■■■□□ 2.6
CASC3-207ENST00000581849 RREB1Q92766 1687 aa31.29■■■□□ 2.6
CASC3-207ENST00000581849 SBF2Q86WG5 1849 aa31.28■■■□□ 2.6
CASC3-207ENST00000581849 LRP5O75197 1615 aa31.27■■■□□ 2.6
CASC3-207ENST00000581849 COG3Q96JB2 828 aa31.26■■■□□ 2.59
CASC3-207ENST00000581849 RGPD3A6NKT7 1758 aaPredicted RBP31.25■■■□□ 2.59
CASC3-207ENST00000581849 RGPD4Q7Z3J3 1758 aa31.25■■■□□ 2.59
CASC3-207ENST00000581849 TNS2Q63HR2 1409 aa31.24■■■□□ 2.59
CASC3-207ENST00000581849 FAM208AQ9UK61 1670 aaKnown RBP31.23■■■□□ 2.59
CASC3-207ENST00000581849 EXOC5O00471 708 aa31.22■■■□□ 2.59
CASC3-207ENST00000581849 MARCH10Q8NA82 808 aaPredicted RBP31.22■■■□□ 2.59
CASC3-207ENST00000581849 ANKRD24Q8TF21 1146 aa31.22■■■□□ 2.59
CASC3-207ENST00000581849 IP6K1Q92551 441 aa31.22■■■□□ 2.59
CASC3-207ENST00000581849 NUP188Q5SRE5 1749 aa31.21■■■□□ 2.59
CASC3-207ENST00000581849 PSDA5PKW4 1024 aaPredicted RBP31.21■■■□□ 2.59
CASC3-207ENST00000581849 NLRP2Q9NX02 1062 aa31.2■■■□□ 2.59
CASC3-207ENST00000581849 BCL11BQ9C0K0 894 aaPredicted RBP31.19■■■□□ 2.58
CASC3-207ENST00000581849 PLSCR1O15162 318 aa31.18■■■□□ 2.58
CASC3-207ENST00000581849 IL2RBP14784 551 aa31.16■■■□□ 2.58
CASC3-207ENST00000581849 R3HDM1Q15032 1099 aaKnown RBP31.16■■■□□ 2.58
CASC3-207ENST00000581849 MYOM1P52179 1685 aa31.16■■■□□ 2.58
CASC3-207ENST00000581849 FYB1O15117 783 aa31.15■■■□□ 2.58
CASC3-207ENST00000581849 MAP3K19Q56UN5 1328 aa31.15■■■□□ 2.58
CASC3-207ENST00000581849 RTL1A6NKG5 1358 aa31.15■■■□□ 2.58
CASC3-207ENST00000581849 KIF20BQ96Q89 1820 aa31.13■■■□□ 2.57
CASC3-207ENST00000581849 NBPF14Q5TI25 921 aa31.13■■■□□ 2.57
CASC3-207ENST00000581849 HOXC9P31274 260 aa31.11■■■□□ 2.57
CASC3-207ENST00000581849 AMPHP49418 695 aa31.1■■■□□ 2.57
CASC3-207ENST00000581849 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
CASC3-207ENST00000581849 GGNBP2Q9H3C7 697 aa31.08■■■□□ 2.57
CASC3-207ENST00000581849 NHSQ6T4R5 1651 aa31.08■■■□□ 2.57
CASC3-207ENST00000581849 KIF24Q5T7B8 1368 aa31.06■■■□□ 2.56
CASC3-207ENST00000581849 PTF1AQ7RTS3 328 aa31.04■■■□□ 2.56
CASC3-207ENST00000581849 LTV1Q96GA3 475 aaPredicted RBP31.03■■■□□ 2.56
CASC3-207ENST00000581849 CARD14Q9BXL6 1004 aa31.03■■■□□ 2.56
CASC3-207ENST00000581849 NSD3Q9BZ95 1437 aa31.03■■■□□ 2.56
CASC3-207ENST00000581849 FBLN1P23142 703 aa31.02■■■□□ 2.56
CASC3-207ENST00000581849 EIF4G2P78344 907 aaKnown RBP eCLIP31.01■■■□□ 2.55
CASC3-207ENST00000581849 RRS1Q15050 365 aaKnown RBP31.01■■■□□ 2.55
CASC3-207ENST00000581849 SMG6Q86US8 1419 aaKnown RBP31■■■□□ 2.55
CASC3-207ENST00000581849 INSRP06213 1382 aa30.98■■■□□ 2.55
CASC3-207ENST00000581849 FLT4P35916 1363 aa30.98■■■□□ 2.55
CASC3-207ENST00000581849 RGPD2P0DJD1 1756 aa30.97■■■□□ 2.55
CASC3-207ENST00000581849 KCNQ2O43526 872 aa30.96■■■□□ 2.55
CASC3-207ENST00000581849 PROM2Q8N271 834 aa30.96■■■□□ 2.55
CASC3-207ENST00000581849 TXNRD1Q16881 649 aa30.95■■■□□ 2.55
CASC3-207ENST00000581849 CGNL1Q0VF96 1302 aa30.95■■■□□ 2.54
CASC3-207ENST00000581849 ANKRD26Q9UPS8 1709 aa30.93■■■□□ 2.54
CASC3-207ENST00000581849 BTAF1O14981 1849 aa30.92■■■□□ 2.54
CASC3-207ENST00000581849 HSPA5P11021 654 aaKnown RBP30.92■■■□□ 2.54
CASC3-207ENST00000581849 ACSBG1Q96GR2 724 aa30.92■■■□□ 2.54
CASC3-207ENST00000581849 MEGF6O75095 1541 aa30.92■■■□□ 2.54
CASC3-207ENST00000581849 NBPF6Q5VWK0 638 aa30.91■■■□□ 2.54
CASC3-207ENST00000581849 NBPF4Q96M43 638 aa30.91■■■□□ 2.54
CASC3-207ENST00000581849 ANO8Q9HCE9 1232 aaPredicted RBP30.91■■■□□ 2.54
CASC3-207ENST00000581849 SHANK3Q9BYB0 1731 aa30.9■■■□□ 2.54
CASC3-207ENST00000581849 HSP90AB2PQ58FF8 381 aa30.89■■■□□ 2.54
CASC3-207ENST00000581849 ZCRB1Q8TBF4 217 aaKnown RBP30.89■■■□□ 2.54
CASC3-207ENST00000581849 DDX54Q8TDD1 881 aaKnown RBP30.89■■■□□ 2.54
CASC3-207ENST00000581849 KAT6BQ8WYB5 2073 aa30.88■■■□□ 2.53
CASC3-207ENST00000581849 CASZ1Q86V15 1759 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms