RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 MYT1Q01538 1121 aa14.31□□□□□ -0.12
PPP4R1-220ENST00000581835 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
PPP4R1-220ENST00000581835 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
PPP4R1-220ENST00000581835 OVOS2A0A0J9YW53 1432 aa14.31□□□□□ -0.12
PPP4R1-220ENST00000581835 OVOS2Q6IE36 1432 aa14.31□□□□□ -0.12
PPP4R1-220ENST00000581835 LTN1O94822 1766 aa14.3□□□□□ -0.12
PPP4R1-220ENST00000581835 BARGINQ6ZT62 677 aa14.29□□□□□ -0.12
PPP4R1-220ENST00000581835 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
PPP4R1-220ENST00000581835 CRB1P82279 1406 aa14.29□□□□□ -0.12
PPP4R1-220ENST00000581835 ABCC6O95255 1503 aa14.28□□□□□ -0.12
PPP4R1-220ENST00000581835 THRAP3Q9Y2W1 955 aaKnown RBP14.28□□□□□ -0.12
PPP4R1-220ENST00000581835 WDR17Q8IZU2 1322 aa14.27□□□□□ -0.12
PPP4R1-220ENST00000581835 FYB1O15117 783 aa14.27□□□□□ -0.13
PPP4R1-220ENST00000581835 CCDC125Q86Z20 511 aa14.27□□□□□ -0.13
PPP4R1-220ENST00000581835 COG3Q96JB2 828 aa14.27□□□□□ -0.13
PPP4R1-220ENST00000581835 TOM1L2Q6ZVM7 507 aa14.26□□□□□ -0.13
PPP4R1-220ENST00000581835 CARD14Q9BXL6 1004 aa14.26□□□□□ -0.13
PPP4R1-220ENST00000581835 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
PPP4R1-220ENST00000581835 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
PPP4R1-220ENST00000581835 GGNBP2Q9H3C7 697 aa14.25□□□□□ -0.13
PPP4R1-220ENST00000581835 BLMP54132 1417 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-220ENST00000581835 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-220ENST00000581835 FAM182BQ5T319 152 aa14.24□□□□□ -0.13
PPP4R1-220ENST00000581835 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
PPP4R1-220ENST00000581835 WNK3Q9BYP7 1800 aa14.23□□□□□ -0.13
PPP4R1-220ENST00000581835 C11orf95C9JLR9 678 aaPredicted RBP14.23□□□□□ -0.13
PPP4R1-220ENST00000581835 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
PPP4R1-220ENST00000581835 FBLN1P23142 703 aa14.23□□□□□ -0.13
PPP4R1-220ENST00000581835 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
PPP4R1-220ENST00000581835 ERBB3P21860 1342 aa14.22□□□□□ -0.13
PPP4R1-220ENST00000581835 IP6K1Q92551 441 aa14.22□□□□□ -0.13
PPP4R1-220ENST00000581835 MAP3K19Q56UN5 1328 aa14.21□□□□□ -0.13
PPP4R1-220ENST00000581835 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
PPP4R1-220ENST00000581835 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
PPP4R1-220ENST00000581835 LRRC37A3O60309 1634 aa14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 RGPD1P0DJD0 1748 aa14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 HOXC9P31274 260 aa14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 SF3B2Q13435 895 aaKnown RBP14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 FAM196AQ6ZSG2 479 aa14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
PPP4R1-220ENST00000581835 DISP2A7MBM2 1401 aa14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 AMPHP49418 695 aa14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 DEFB132Q7Z7B7 95 aa14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 PANK3Q9H999 370 aa14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 NLRP2Q9NX02 1062 aa14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
PPP4R1-220ENST00000581835 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
PPP4R1-220ENST00000581835 DDB1Q16531 1140 aa14.17□□□□□ -0.14
PPP4R1-220ENST00000581835 TNS1Q9HBL0 1735 aaKnown RBP14.17□□□□□ -0.14
PPP4R1-220ENST00000581835 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
PPP4R1-220ENST00000581835 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
PPP4R1-220ENST00000581835 RTL1A6NKG5 1358 aa14.16□□□□□ -0.14
PPP4R1-220ENST00000581835 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.14
PPP4R1-220ENST00000581835 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
PPP4R1-220ENST00000581835 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
PPP4R1-220ENST00000581835 TRIM37O94972 964 aa14.15□□□□□ -0.14
PPP4R1-220ENST00000581835 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-220ENST00000581835 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
PPP4R1-220ENST00000581835 EXOC5O00471 708 aa14.14□□□□□ -0.15
PPP4R1-220ENST00000581835 BAG6P46379 1132 aa14.14□□□□□ -0.15
PPP4R1-220ENST00000581835 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
PPP4R1-220ENST00000581835 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
PPP4R1-220ENST00000581835 KIF24Q5T7B8 1368 aa14.13□□□□□ -0.15
PPP4R1-220ENST00000581835 IL2RBP14784 551 aa14.13□□□□□ -0.15
PPP4R1-220ENST00000581835 MARCH10Q8NA82 808 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-220ENST00000581835 FLT4P35916 1363 aa14.12□□□□□ -0.15
PPP4R1-220ENST00000581835 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
PPP4R1-220ENST00000581835 HSP90AB2PQ58FF8 381 aa14.12□□□□□ -0.15
PPP4R1-220ENST00000581835 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
PPP4R1-220ENST00000581835 INSRP06213 1382 aa14.11□□□□□ -0.15
PPP4R1-220ENST00000581835 TNS2Q63HR2 1409 aa14.11□□□□□ -0.15
PPP4R1-220ENST00000581835 BCL9O00512 1426 aa14.1□□□□□ -0.15
PPP4R1-220ENST00000581835 APBA3O96018 575 aa14.1□□□□□ -0.15
PPP4R1-220ENST00000581835 NBPF6Q5VWK0 638 aa14.1□□□□□ -0.15
PPP4R1-220ENST00000581835 NBPF4Q96M43 638 aa14.1□□□□□ -0.15
PPP4R1-220ENST00000581835 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
PPP4R1-220ENST00000581835 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
PPP4R1-220ENST00000581835 NSD2O96028 1365 aa14.09□□□□□ -0.15
PPP4R1-220ENST00000581835 SMG6Q86US8 1419 aaKnown RBP14.08□□□□□ -0.15
PPP4R1-220ENST00000581835 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-220ENST00000581835 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-220ENST00000581835 EZH2Q15910 746 aaKnown RBP14.08□□□□□ -0.16
PPP4R1-220ENST00000581835 CAMKK2Q96RR4 588 aa14.08□□□□□ -0.16
PPP4R1-220ENST00000581835 WASHC2AQ641Q2 1341 aa14.08□□□□□ -0.16
PPP4R1-220ENST00000581835 PER1O15534 1290 aaPredicted RBP14.07□□□□□ -0.16
PPP4R1-220ENST00000581835 SRCAPQ6ZRS2 3230 aa14.07□□□□□ -0.16
PPP4R1-220ENST00000581835 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-220ENST00000581835 PTF1AQ7RTS3 328 aa14.06□□□□□ -0.16
PPP4R1-220ENST00000581835 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
PPP4R1-220ENST00000581835 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
PPP4R1-220ENST00000581835 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-220ENST00000581835 MEGF6O75095 1541 aa14.05□□□□□ -0.16
PPP4R1-220ENST00000581835 SHANK3Q9BYB0 1731 aa14.05□□□□□ -0.16
PPP4R1-220ENST00000581835 PARD3Q8TEW0 1356 aa14.05□□□□□ -0.16
PPP4R1-220ENST00000581835 RREB1Q92766 1687 aa14.04□□□□□ -0.16
PPP4R1-220ENST00000581835 PLSCR1O15162 318 aa14.03□□□□□ -0.16
PPP4R1-220ENST00000581835 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
PPP4R1-220ENST00000581835 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms