RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-220ENST00000581160 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
CDK5RAP3-220ENST00000581160 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP3-220ENST00000581160 IL13P35225 146 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 CHRNA2Q15822 529 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 LTN1O94822 1766 aa12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 COL18A1P39060 1754 aa12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ADAMTS2O95450 1211 aa12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ABCC6O95255 1503 aa12.24□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ANKRD24Q8TF21 1146 aa12.24□□□□□ -0.45
CDK5RAP3-220ENST00000581160 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDK5RAP3-220ENST00000581160 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
CDK5RAP3-220ENST00000581160 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 EVA1CP58658 441 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 FAM9BQ8IZU0 186 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 EYA1Q99502 592 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ERBB3P21860 1342 aa12.21□□□□□ -0.45
CDK5RAP3-220ENST00000581160 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
CDK5RAP3-220ENST00000581160 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 FCHSD2O94868 740 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 CSB-PGBD3P0DP91 1061 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 MEX3CQ5U5Q3 659 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NBPF6Q5VWK0 638 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NBPF4Q96M43 638 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 LRP6O75581 1613 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 SLIT2O94813 1529 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 HMOX1P09601 288 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 RSPH6AQ9H0K4 717 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 USP21Q9UK80 565 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 RGPD1P0DJD0 1748 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 KDRP35968 1356 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 BCL9LQ86UU0 1499 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 CRB1P82279 1406 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 VPS72Q15906 364 aa12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 AFF2P51816 1311 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NEFMP07197 916 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NRAPQ86VF7 1730 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TCP11L2Q8N4U5 519 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 APAF1O14727 1248 aa12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PLEKHG2Q9H7P9 1386 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 IL2RBP14784 551 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.471e-11■■□□□ 11.5
CDK5RAP3-220ENST00000581160 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms