RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 RGPD8O14715 1765 aaPredicted RBP8.15□□□□□ -1.11
RNU4ATAC-201ENST00000580972 MED1Q15648 1581 aaPredicted RBP8.14□□□□□ -1.11
RNU4ATAC-201ENST00000580972 SULT6B1Q6IMI4 303 aa8.14□□□□□ -1.11
RNU4ATAC-201ENST00000580972 LRRC59Q96AG4 307 aaKnown RBP8.14□□□□□ -1.11
RNU4ATAC-201ENST00000580972 EYA1Q99502 592 aa8.14□□□□□ -1.11
RNU4ATAC-201ENST00000580972 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
RNU4ATAC-201ENST00000580972 AXIN2Q9Y2T1 843 aa8.14□□□□□ -1.11
RNU4ATAC-201ENST00000580972 SLIT3O75094 1523 aa8.13□□□□□ -1.11
RNU4ATAC-201ENST00000580972 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
RNU4ATAC-201ENST00000580972 TMPOP42166 694 aaKnown RBP8.13□□□□□ -1.11
RNU4ATAC-201ENST00000580972 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
RNU4ATAC-201ENST00000580972 IP6K1Q92551 441 aa8.13□□□□□ -1.11
RNU4ATAC-201ENST00000580972 TRIM35Q9UPQ4 493 aa8.13□□□□□ -1.11
RNU4ATAC-201ENST00000580972 TRPM3Q9HCF6 1732 aaPredicted RBP8.12□□□□□ -1.11
RNU4ATAC-201ENST00000580972 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
RNU4ATAC-201ENST00000580972 FCHSD2O94868 740 aa8.12□□□□□ -1.11
RNU4ATAC-201ENST00000580972 WWC1Q8IX03 1113 aa8.12□□□□□ -1.11
RNU4ATAC-201ENST00000580972 PHF23Q9BUL5 403 aaPredicted RBP8.12□□□□□ -1.11
RNU4ATAC-201ENST00000580972 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
RNU4ATAC-201ENST00000580972 KIF1AQ12756 1690 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 RTL1A6NKG5 1358 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 ARHGEF10O15013 1369 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 KIAA0232Q92628 1395 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 SLFN5Q08AF3 891 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 DCTN1Q14203 1278 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 DUSP27Q5VZP5 1158 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 KCNH5Q8NCM2 988 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 ANKRD24Q8TF21 1146 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
RNU4ATAC-201ENST00000580972 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
RNU4ATAC-201ENST00000580972 RIPK4P57078 832 aa8.1□□□□□ -1.11
RNU4ATAC-201ENST00000580972 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
RNU4ATAC-201ENST00000580972 NFE2L2Q16236 605 aa8.1□□□□□ -1.11
RNU4ATAC-201ENST00000580972 MTHFSDQ2M296 383 aaKnown RBP8.09□□□□□ -1.11
RNU4ATAC-201ENST00000580972 TSR2Q969E8 191 aaKnown RBP8.09□□□□□ -1.11
RNU4ATAC-201ENST00000580972 HAP1P54257 671 aaPredicted RBP8.08□□□□□ -1.12
RNU4ATAC-201ENST00000580972 PDE3BQ13370 1112 aa8.08□□□□□ -1.12
RNU4ATAC-201ENST00000580972 TRMT2AQ8IZ69 625 aaKnown RBP8.08□□□□□ -1.12
RNU4ATAC-201ENST00000580972 PRDM11Q9NQV5 511 aa8.08□□□□□ -1.12
RNU4ATAC-201ENST00000580972 KIF24Q5T7B8 1368 aa8.08□□□□□ -1.12
RNU4ATAC-201ENST00000580972 ALS2Q96Q42 1657 aa8.08□□□□□ -1.12
RNU4ATAC-201ENST00000580972 ERBB3P21860 1342 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 FKBP8Q14318 412 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 CCDC27Q2M243 656 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 MCM10Q7L590 875 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 CERKQ8TCT0 537 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 USP54Q70EL1 1684 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 KDRP35968 1356 aa8.07□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NUTM2BA6NNL0 878 aaPredicted RBP8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NUTM2EB1AL46 878 aaPredicted RBP8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 E9PSI1 815 aa8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 PLIN1O60240 522 aa8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 TOM1O60784 492 aa8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 CSB-PGBD3P0DP91 1061 aa8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NUTM2AQ8IVF1 878 aaPredicted RBP8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 CPDO75976 1380 aa8.06□□□□□ -1.12
RNU4ATAC-201ENST00000580972 FANCIQ9NVI1 1328 aa8.05□□□□□ -1.12
RNU4ATAC-201ENST00000580972 ADAMTS2O95450 1211 aa8.05□□□□□ -1.12
RNU4ATAC-201ENST00000580972 WDR63Q8IWG1 891 aa8.05□□□□□ -1.12
RNU4ATAC-201ENST00000580972 STRN4Q9NRL3 753 aa8.05□□□□□ -1.12
RNU4ATAC-201ENST00000580972 ROBO1Q9Y6N7 1651 aa8.05□□□□□ -1.12
RNU4ATAC-201ENST00000580972 AHDC1Q5TGY3 1603 aaPredicted RBP8.04□□□□□ -1.12
RNU4ATAC-201ENST00000580972 EXOSC9Q06265 439 aaKnown RBP8.04□□□□□ -1.12
RNU4ATAC-201ENST00000580972 KRT24Q2M2I5 525 aa8.04□□□□□ -1.12
RNU4ATAC-201ENST00000580972 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
RNU4ATAC-201ENST00000580972 PNNQ9H307 717 aaKnown RBP8.04□□□□□ -1.12
RNU4ATAC-201ENST00000580972 MIS18AQ9NYP9 233 aa8.04□□□□□ -1.12
RNU4ATAC-201ENST00000580972 RNF123Q5XPI4 1314 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 RGPD1P0DJD0 1748 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 CAMTA1Q9Y6Y1 1673 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 BCAR3O75815 825 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NEFMP07197 916 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 RRP1P56182 461 aaKnown RBP8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 C20orf194Q5TEA3 1177 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NGEFQ8N5V2 710 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 TNNQ9UQP3 1299 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 NHSL1Q5SYE7 1610 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 PHRF1Q9P1Y6 1649 aaKnown RBP8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 MEGF6O75095 1541 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 CRB1P82279 1406 aa8.03□□□□□ -1.12
RNU4ATAC-201ENST00000580972 TCERG1O14776 1098 aaKnown RBP8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 ZNF853P0CG23 659 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 HSPA1LP34931 641 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 NCBP3Q53F19 620 aaKnown RBP8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 TSPYL6Q8N831 410 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 IL17REQ8NFR9 667 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 MBIPQ9NS73 344 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms