RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 DDB1Q16531 1140 aa29.67■■■□□ 2.34
SNX11-207ENST00000580875 LRRC37A3O60309 1634 aa29.67■■■□□ 2.34
SNX11-207ENST00000580875 KTN1Q86UP2 1357 aaKnown RBP29.66■■■□□ 2.34
SNX11-207ENST00000580875 NBPF14Q5TI25 921 aa29.66■■■□□ 2.34
SNX11-207ENST00000580875 SBNO2Q9Y2G9 1366 aa29.65■■■□□ 2.34
SNX11-207ENST00000580875 NUP188Q5SRE5 1749 aa29.65■■■□□ 2.34
SNX11-207ENST00000580875 SOX12O15370 315 aa29.64■■■□□ 2.34
SNX11-207ENST00000580875 PEAK1Q9H792 1746 aa29.64■■■□□ 2.34
SNX11-207ENST00000580875 CDCA7Q9BWT1 371 aaPredicted RBP29.63■■■□□ 2.33
SNX11-207ENST00000580875 TRIM26Q12899 539 aaPredicted RBP29.62■■■□□ 2.33
SNX11-207ENST00000580875 CSB-PGBD3P0DP91 1061 aa29.61■■■□□ 2.33
SNX11-207ENST00000580875 CARD11Q9BXL7 1154 aa29.61■■■□□ 2.33
SNX11-207ENST00000580875 NFAT5O94916 1531 aa29.61■■■□□ 2.33
SNX11-207ENST00000580875 CARD10Q9BWT7 1032 aa29.59■■■□□ 2.33
SNX11-207ENST00000580875 WNK3Q9BYP7 1800 aa29.58■■■□□ 2.33
SNX11-207ENST00000580875 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
SNX11-207ENST00000580875 ABCC6O95255 1503 aa29.57■■■□□ 2.32
SNX11-207ENST00000580875 PLSCR1O15162 318 aa29.56■■■□□ 2.32
SNX11-207ENST00000580875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.56■■■□□ 2.32
SNX11-207ENST00000580875 MARCH10Q8NA82 808 aaPredicted RBP29.56■■■□□ 2.32
SNX11-207ENST00000580875 BCL11BQ9C0K0 894 aaPredicted RBP29.56■■■□□ 2.32
SNX11-207ENST00000580875 BCL9O00512 1426 aa29.55■■■□□ 2.32
SNX11-207ENST00000580875 USP31Q70CQ4 1352 aa29.55■■■□□ 2.32
SNX11-207ENST00000580875 RGPD3A6NKT7 1758 aaPredicted RBP29.54■■■□□ 2.32
SNX11-207ENST00000580875 RGPD4Q7Z3J3 1758 aa29.54■■■□□ 2.32
SNX11-207ENST00000580875 RGPD5Q99666 1765 aa29.54■■■□□ 2.32
SNX11-207ENST00000580875 CD163L1Q9NR16 1453 aa29.54■■■□□ 2.32
SNX11-207ENST00000580875 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
SNX11-207ENST00000580875 SBF2Q86WG5 1849 aa29.53■■■□□ 2.32
SNX11-207ENST00000580875 TMC1Q8TDI8 760 aa29.53■■■□□ 2.32
SNX11-207ENST00000580875 CCDC7Q96M83 1385 aa29.52■■■□□ 2.32
SNX11-207ENST00000580875 HDGFL2Q7Z4V5 671 aaPredicted RBP29.51■■■□□ 2.31
SNX11-207ENST00000580875 NME9Q86XW9 330 aa29.51■■■□□ 2.31
SNX11-207ENST00000580875 EXOC5O00471 708 aa29.5■■■□□ 2.31
SNX11-207ENST00000580875 PTF1AQ7RTS3 328 aa29.5■■■□□ 2.31
SNX11-207ENST00000580875 USP54Q70EL1 1684 aa29.5■■■□□ 2.31
SNX11-207ENST00000580875 SLC12A5Q9H2X9 1139 aa29.48■■■□□ 2.31
SNX11-207ENST00000580875 SPON1Q9HCB6 807 aa29.47■■■□□ 2.31
SNX11-207ENST00000580875 EDC4Q6P2E9 1401 aaKnown RBP29.46■■■□□ 2.31
SNX11-207ENST00000580875 PUS7Q96PZ0 661 aaKnown RBP29.46■■■□□ 2.31
SNX11-207ENST00000580875 TERF2IPQ9NYB0 399 aa29.46■■■□□ 2.31
SNX11-207ENST00000580875 ERBB3P21860 1342 aa29.45■■■□□ 2.31
SNX11-207ENST00000580875 TNS2Q63HR2 1409 aa29.45■■■□□ 2.3
SNX11-207ENST00000580875 KCNQ2O43526 872 aa29.44■■■□□ 2.3
SNX11-207ENST00000580875 PCGF6Q9BYE7 350 aa29.43■■■□□ 2.3
SNX11-207ENST00000580875 NLRP2Q9NX02 1062 aa29.43■■■□□ 2.3
SNX11-207ENST00000580875 A0A1W2PP64 1363 aa29.42■■■□□ 2.3
SNX11-207ENST00000580875 PROM2Q8N271 834 aa29.42■■■□□ 2.3
SNX11-207ENST00000580875 ANO8Q9HCE9 1232 aaPredicted RBP29.42■■■□□ 2.3
SNX11-207ENST00000580875 PPP1R1BQ9UD71 204 aaPredicted RBP29.41■■■□□ 2.3
SNX11-207ENST00000580875 LTN1O94822 1766 aa29.39■■■□□ 2.3
SNX11-207ENST00000580875 IL2RBP14784 551 aa29.38■■■□□ 2.29
SNX11-207ENST00000580875 TXNRD1Q16881 649 aa29.38■■■□□ 2.29
SNX11-207ENST00000580875 ANKRD24Q8TF21 1146 aa29.38■■■□□ 2.29
SNX11-207ENST00000580875 NINLQ9Y2I6 1382 aa29.37■■■□□ 2.29
SNX11-207ENST00000580875 TESK2Q96S53 571 aa29.36■■■□□ 2.29
SNX11-207ENST00000580875 ST20-MTHFSA0A0A6YYL1 179 aa29.34■■■□□ 2.29
SNX11-207ENST00000580875 SLC24A1O60721 1099 aa29.33■■■□□ 2.29
SNX11-207ENST00000580875 CASZ1Q86V15 1759 aa29.33■■■□□ 2.29
SNX11-207ENST00000580875 NHSQ6T4R5 1651 aa29.32■■■□□ 2.28
SNX11-207ENST00000580875 STK32BQ9NY57 414 aa29.32■■■□□ 2.28
SNX11-207ENST00000580875 ACSBG1Q96GR2 724 aa29.31■■■□□ 2.28
SNX11-207ENST00000580875 IP6K1Q92551 441 aa29.3■■■□□ 2.28
SNX11-207ENST00000580875 PDGFDQ9GZP0 370 aaPredicted RBP29.3■■■□□ 2.28
SNX11-207ENST00000580875 SLC15A2Q16348 729 aa29.28■■■□□ 2.28
SNX11-207ENST00000580875 ZBTB7AO95365 584 aa29.27■■■□□ 2.28
SNX11-207ENST00000580875 COG3Q96JB2 828 aa29.27■■■□□ 2.28
SNX11-207ENST00000580875 DCAF8L1A6NGE4 600 aa29.25■■■□□ 2.27
SNX11-207ENST00000580875 LTV1Q96GA3 475 aaPredicted RBP29.24■■■□□ 2.27
SNX11-207ENST00000580875 FAM208AQ9UK61 1670 aaKnown RBP29.23■■■□□ 2.27
SNX11-207ENST00000580875 ANKRD36BQ8N2N9 1353 aa29.23■■■□□ 2.27
SNX11-207ENST00000580875 MAP3K19Q56UN5 1328 aa29.21■■■□□ 2.27
SNX11-207ENST00000580875 PTGER2P43116 358 aa29.21■■■□□ 2.27
SNX11-207ENST00000580875 ATF5Q9Y2D1 282 aaPredicted RBP29.21■■■□□ 2.27
SNX11-207ENST00000580875 YY1P25490 414 aa29.2■■■□□ 2.26
SNX11-207ENST00000580875 HOXC9P31274 260 aa29.2■■■□□ 2.26
SNX11-207ENST00000580875 AMPHP49418 695 aa29.2■■■□□ 2.26
SNX11-207ENST00000580875 BTAF1O14981 1849 aa29.18■■■□□ 2.26
SNX11-207ENST00000580875 TMF1P82094 1093 aa29.18■■■□□ 2.26
SNX11-207ENST00000580875 DDX54Q8TDD1 881 aaKnown RBP29.18■■■□□ 2.26
SNX11-207ENST00000580875 MTFR1LQ9H019 292 aa29.18■■■□□ 2.26
SNX11-207ENST00000580875 PAPPAQ13219 1627 aa29.17■■■□□ 2.26
SNX11-207ENST00000580875 USP47Q96K76 1375 aa29.16■■■□□ 2.26
SNX11-207ENST00000580875 MYOM1P52179 1685 aa29.16■■■□□ 2.26
SNX11-207ENST00000580875 FBLN1P23142 703 aa29.16■■■□□ 2.26
SNX11-207ENST00000580875 RTL1A6NKG5 1358 aa29.14■■■□□ 2.26
SNX11-207ENST00000580875 LRRC4BQ9NT99 713 aa29.12■■■□□ 2.25
SNX11-207ENST00000580875 FYB1O15117 783 aa29.11■■■□□ 2.25
SNX11-207ENST00000580875 ZNF827Q17R98 1081 aa29.11■■■□□ 2.25
SNX11-207ENST00000580875 SGIP1Q9BQI5 828 aa29.11■■■□□ 2.25
SNX11-207ENST00000580875 RRS1Q15050 365 aaKnown RBP29.1■■■□□ 2.25
SNX11-207ENST00000580875 SLC27A3Q5K4L6 730 aa29.1■■■□□ 2.25
SNX11-207ENST00000580875 GGNBP2Q9H3C7 697 aa29.1■■■□□ 2.25
SNX11-207ENST00000580875 CDCA8Q53HL2 280 aa29.09■■■□□ 2.25
SNX11-207ENST00000580875 ZCRB1Q8TBF4 217 aaKnown RBP29.09■■■□□ 2.25
SNX11-207ENST00000580875 SYTL4Q96C24 671 aaPredicted RBP29.08■■■□□ 2.25
SNX11-207ENST00000580875 FHDC1Q9C0D6 1143 aaPredicted RBP29.08■■■□□ 2.25
SNX11-207ENST00000580875 MEGF6O75095 1541 aa29.08■■■□□ 2.25
SNX11-207ENST00000580875 PRIM1P49642 420 aaKnown RBP29.07■■■□□ 2.24
SNX11-207ENST00000580875 KAT6BQ8WYB5 2073 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms