RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
CDK5RAP3-219ENST00000580670 ARHGEF25Q86VW2 580 aa18.39■□□□□ 0.53
CDK5RAP3-219ENST00000580670 CCDC146Q8IYE0 955 aa18.39■□□□□ 0.53
CDK5RAP3-219ENST00000580670 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-219ENST00000580670 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
CDK5RAP3-219ENST00000580670 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP3-219ENST00000580670 CRYBG1Q9Y4K1 1723 aa18.38■□□□□ 0.53
CDK5RAP3-219ENST00000580670 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-219ENST00000580670 IP6K1Q92551 441 aa18.37■□□□□ 0.53
CDK5RAP3-219ENST00000580670 PHLPP1O60346 1717 aa18.36■□□□□ 0.53
CDK5RAP3-219ENST00000580670 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
CDK5RAP3-219ENST00000580670 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-219ENST00000580670 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
CDK5RAP3-219ENST00000580670 COL16A1Q07092 1604 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-219ENST00000580670 FCHSD2O94868 740 aa18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 HMOX1P09601 288 aa18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 APAF1O14727 1248 aa18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-219ENST00000580670 CPDO75976 1380 aa18.31■□□□□ 0.52
CDK5RAP3-219ENST00000580670 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
CDK5RAP3-219ENST00000580670 RSPH6AQ9H0K4 717 aa18.31■□□□□ 0.52
CDK5RAP3-219ENST00000580670 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
CDK5RAP3-219ENST00000580670 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
CDK5RAP3-219ENST00000580670 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
CDK5RAP3-219ENST00000580670 MAPK8IP3Q9UPT6 1336 aa18.29■□□□□ 0.52
CDK5RAP3-219ENST00000580670 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
CDK5RAP3-219ENST00000580670 CHRNA2Q15822 529 aa18.29■□□□□ 0.52
CDK5RAP3-219ENST00000580670 SULT6B1Q6IMI4 303 aa18.29■□□□□ 0.52
CDK5RAP3-219ENST00000580670 EYA1Q99502 592 aa18.29■□□□□ 0.52
CDK5RAP3-219ENST00000580670 COL22A1Q8NFW1 1626 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-219ENST00000580670 AEBP1Q8IUX7 1158 aa18.28■□□□□ 0.52
CDK5RAP3-219ENST00000580670 TCP11L2Q8N4U5 519 aa18.28■□□□□ 0.52
CDK5RAP3-219ENST00000580670 PRDM11Q9NQV5 511 aa18.28■□□□□ 0.52
CDK5RAP3-219ENST00000580670 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
CDK5RAP3-219ENST00000580670 ANKRD24Q8TF21 1146 aa18.27■□□□□ 0.52
CDK5RAP3-219ENST00000580670 COL18A1P39060 1754 aa18.27■□□□□ 0.52
CDK5RAP3-219ENST00000580670 ABCC6O95255 1503 aa18.27■□□□□ 0.52
CDK5RAP3-219ENST00000580670 NEFMP07197 916 aa18.27■□□□□ 0.51
CDK5RAP3-219ENST00000580670 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
CDK5RAP3-219ENST00000580670 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-219ENST00000580670 NEUROD2Q15784 382 aa18.25■□□□□ 0.51
CDK5RAP3-219ENST00000580670 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
CDK5RAP3-219ENST00000580670 KDRP35968 1356 aa18.24■□□□□ 0.51
CDK5RAP3-219ENST00000580670 ERBB3P21860 1342 aa18.23■□□□□ 0.51
CDK5RAP3-219ENST00000580670 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
CDK5RAP3-219ENST00000580670 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
CDK5RAP3-219ENST00000580670 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
CDK5RAP3-219ENST00000580670 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-219ENST00000580670 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
CDK5RAP3-219ENST00000580670 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
CDK5RAP3-219ENST00000580670 FAM83GA6ND36 823 aa18.21■□□□□ 0.51
CDK5RAP3-219ENST00000580670 LMO7Q8WWI1 1683 aa18.21■□□□□ 0.51
CDK5RAP3-219ENST00000580670 CSB-PGBD3P0DP91 1061 aa18.2■□□□□ 0.5
CDK5RAP3-219ENST00000580670 JCADQ9P266 1359 aa18.2■□□□□ 0.5
CDK5RAP3-219ENST00000580670 CAMTA1Q9Y6Y1 1673 aa18.2■□□□□ 0.5
CDK5RAP3-219ENST00000580670 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 RIPK4P57078 832 aa18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 WWC1Q8IX03 1113 aa18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-219ENST00000580670 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-219ENST00000580670 HSPA1LP34931 641 aa18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 NCAPD2Q15021 1401 aa18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 COL5A2P05997 1499 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 ADAMTS2O95450 1211 aa18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-219ENST00000580670 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
CDK5RAP3-219ENST00000580670 EVA1CP58658 441 aa18.15■□□□□ 0.5
CDK5RAP3-219ENST00000580670 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
CDK5RAP3-219ENST00000580670 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
CDK5RAP3-219ENST00000580670 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
CDK5RAP3-219ENST00000580670 STRN4Q9NRL3 753 aa18.14■□□□□ 0.5
CDK5RAP3-219ENST00000580670 BTG4Q9NY30 223 aa18.14■□□□□ 0.5
CDK5RAP3-219ENST00000580670 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-219ENST00000580670 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
CDK5RAP3-219ENST00000580670 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
CDK5RAP3-219ENST00000580670 GAS2L2Q8NHY3 880 aa18.12■□□□□ 0.49
CDK5RAP3-219ENST00000580670 DLG5Q8TDM6 1919 aa18.12■□□□□ 0.49
CDK5RAP3-219ENST00000580670 LMOD3Q0VAK6 560 aa18.12■□□□□ 0.49
CDK5RAP3-219ENST00000580670 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
CDK5RAP3-219ENST00000580670 LARP1Q6PKG0 1096 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-219ENST00000580670 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
CDK5RAP3-219ENST00000580670 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
CDK5RAP3-219ENST00000580670 E9PSI1 815 aa18.09■□□□□ 0.49
CDK5RAP3-219ENST00000580670 CARD10Q9BWT7 1032 aa18.09■□□□□ 0.49
CDK5RAP3-219ENST00000580670 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-219ENST00000580670 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
CDK5RAP3-219ENST00000580670 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-219ENST00000580670 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-219ENST00000580670 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms