RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 USP35Q9P2H5 1018 aa25.92■■□□□ 1.74
PPP4R1-215ENST00000580182 BRWD3Q6RI45 1802 aa25.92■■□□□ 1.74
PPP4R1-215ENST00000580182 A0A0G2JS52 829 aa25.91■■□□□ 1.74
PPP4R1-215ENST00000580182 MYT1Q01538 1121 aa25.91■■□□□ 1.74
PPP4R1-215ENST00000580182 FYB1O15117 783 aa25.9■■□□□ 1.74
PPP4R1-215ENST00000580182 COG3Q96JB2 828 aa25.9■■□□□ 1.74
PPP4R1-215ENST00000580182 GGNBP2Q9H3C7 697 aa25.9■■□□□ 1.74
PPP4R1-215ENST00000580182 RGPD5Q99666 1765 aa25.89■■□□□ 1.73
PPP4R1-215ENST00000580182 NSD3Q9BZ95 1437 aa25.88■■□□□ 1.73
PPP4R1-215ENST00000580182 FBLN1P23142 703 aa25.88■■□□□ 1.73
PPP4R1-215ENST00000580182 LTN1O94822 1766 aa25.86■■□□□ 1.73
PPP4R1-215ENST00000580182 THSD7AQ9UPZ6 1657 aa25.84■■□□□ 1.73
PPP4R1-215ENST00000580182 CRB1P82279 1406 aa25.84■■□□□ 1.73
PPP4R1-215ENST00000580182 KRT27Q7Z3Y8 459 aa25.84■■□□□ 1.73
PPP4R1-215ENST00000580182 KIF20BQ96Q89 1820 aa25.84■■□□□ 1.73
PPP4R1-215ENST00000580182 TOM1L2Q6ZVM7 507 aa25.83■■□□□ 1.73
PPP4R1-215ENST00000580182 TCP11L2Q8N4U5 519 aa25.83■■□□□ 1.73
PPP4R1-215ENST00000580182 WDR17Q8IZU2 1322 aa25.82■■□□□ 1.72
PPP4R1-215ENST00000580182 BARGINQ6ZT62 677 aa25.81■■□□□ 1.72
PPP4R1-215ENST00000580182 PANK3Q9H999 370 aa25.81■■□□□ 1.72
PPP4R1-215ENST00000580182 KIF7Q2M1P5 1343 aa25.81■■□□□ 1.72
PPP4R1-215ENST00000580182 EP400Q96L91 3159 aa25.81■■□□□ 1.72
PPP4R1-215ENST00000580182 ABCC6O95255 1503 aa25.8■■□□□ 1.72
PPP4R1-215ENST00000580182 CSB-PGBD3P0DP91 1061 aa25.8■■□□□ 1.72
PPP4R1-215ENST00000580182 FAM182BQ5T319 152 aa25.79■■□□□ 1.72
PPP4R1-215ENST00000580182 MAP3K19Q56UN5 1328 aa25.79■■□□□ 1.72
PPP4R1-215ENST00000580182 THRAP3Q9Y2W1 955 aaKnown RBP25.78■■□□□ 1.72
PPP4R1-215ENST00000580182 RRS1Q15050 365 aaKnown RBP25.77■■□□□ 1.72
PPP4R1-215ENST00000580182 IP6K1Q92551 441 aa25.76■■□□□ 1.71
PPP4R1-215ENST00000580182 ERBB3P21860 1342 aa25.75■■□□□ 1.71
PPP4R1-215ENST00000580182 CGNL1Q0VF96 1302 aa25.75■■□□□ 1.71
PPP4R1-215ENST00000580182 ANKRD24Q8TF21 1146 aa25.75■■□□□ 1.71
PPP4R1-215ENST00000580182 CARD10Q9BWT7 1032 aa25.74■■□□□ 1.71
PPP4R1-215ENST00000580182 HOXC9P31274 260 aa25.73■■□□□ 1.71
PPP4R1-215ENST00000580182 AMPHP49418 695 aa25.73■■□□□ 1.71
PPP4R1-215ENST00000580182 LTV1Q96GA3 475 aaPredicted RBP25.72■■□□□ 1.71
PPP4R1-215ENST00000580182 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
PPP4R1-215ENST00000580182 NLRP2Q9NX02 1062 aa25.71■■□□□ 1.71
PPP4R1-215ENST00000580182 PARP4Q9UKK3 1724 aaKnown RBP25.69■■□□□ 1.7
PPP4R1-215ENST00000580182 WNK3Q9BYP7 1800 aa25.69■■□□□ 1.7
PPP4R1-215ENST00000580182 WASHC2AQ641Q2 1341 aa25.68■■□□□ 1.7
PPP4R1-215ENST00000580182 PDE3BQ13370 1112 aa25.68■■□□□ 1.7
PPP4R1-215ENST00000580182 CCDC7Q96M83 1385 aa25.68■■□□□ 1.7
PPP4R1-215ENST00000580182 PEAK1Q9H792 1746 aa25.67■■□□□ 1.7
PPP4R1-215ENST00000580182 EMILIN1Q9Y6C2 1016 aa25.67■■□□□ 1.7
PPP4R1-215ENST00000580182 DISP2A7MBM2 1401 aa25.66■■□□□ 1.7
PPP4R1-215ENST00000580182 CCDC125Q86Z20 511 aa25.66■■□□□ 1.7
PPP4R1-215ENST00000580182 RTL1A6NKG5 1358 aa25.66■■□□□ 1.7
PPP4R1-215ENST00000580182 LRRC37A3O60309 1634 aa25.66■■□□□ 1.7
PPP4R1-215ENST00000580182 ANKRD26Q9UPS8 1709 aa25.65■■□□□ 1.7
PPP4R1-215ENST00000580182 TNNT2P45379 298 aaPredicted RBP25.64■■□□□ 1.7
PPP4R1-215ENST00000580182 DDB1Q16531 1140 aa25.64■■□□□ 1.7
PPP4R1-215ENST00000580182 HSP90AB2PQ58FF8 381 aa25.64■■□□□ 1.7
PPP4R1-215ENST00000580182 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
PPP4R1-215ENST00000580182 CDCA7Q9BWT1 371 aaPredicted RBP25.62■■□□□ 1.69
PPP4R1-215ENST00000580182 RGPD2P0DJD1 1756 aa25.61■■□□□ 1.69
PPP4R1-215ENST00000580182 FLT4P35916 1363 aa25.61■■□□□ 1.69
PPP4R1-215ENST00000580182 PPM1GO15355 546 aaPredicted RBP25.61■■□□□ 1.69
PPP4R1-215ENST00000580182 FAM196AQ6ZSG2 479 aa25.61■■□□□ 1.69
PPP4R1-215ENST00000580182 DEFB132Q7Z7B7 95 aa25.61■■□□□ 1.69
PPP4R1-215ENST00000580182 INSRP06213 1382 aa25.59■■□□□ 1.69
PPP4R1-215ENST00000580182 FAM208AQ9UK61 1670 aaKnown RBP25.59■■□□□ 1.69
PPP4R1-215ENST00000580182 MAP2P11137 1827 aaKnown RBP25.59■■□□□ 1.69
PPP4R1-215ENST00000580182 POLKQ9UBT6 870 aa25.59■■□□□ 1.69
PPP4R1-215ENST00000580182 NSD2O96028 1365 aa25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 KIF24Q5T7B8 1368 aa25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 PER1O15534 1290 aaPredicted RBP25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 IL2RBP14784 551 aa25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 SF3B2Q13435 895 aaKnown RBP25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 AMER1Q5JTC6 1135 aaPredicted RBP25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 MARCH10Q8NA82 808 aaPredicted RBP25.58■■□□□ 1.69
PPP4R1-215ENST00000580182 EXOC5O00471 708 aa25.57■■□□□ 1.68
PPP4R1-215ENST00000580182 TRIM37O94972 964 aa25.57■■□□□ 1.68
PPP4R1-215ENST00000580182 NBPF6Q5VWK0 638 aa25.57■■□□□ 1.68
PPP4R1-215ENST00000580182 NBPF4Q96M43 638 aa25.57■■□□□ 1.68
PPP4R1-215ENST00000580182 MORC1Q86VD1 984 aa25.56■■□□□ 1.68
PPP4R1-215ENST00000580182 USHBP1Q8N6Y0 703 aa25.56■■□□□ 1.68
PPP4R1-215ENST00000580182 RGPD1P0DJD0 1748 aa25.54■■□□□ 1.68
PPP4R1-215ENST00000580182 OVOS2A0A0G2JMS6 1433 aa25.54■■□□□ 1.68
PPP4R1-215ENST00000580182 TNS2Q63HR2 1409 aa25.54■■□□□ 1.68
PPP4R1-215ENST00000580182 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
PPP4R1-215ENST00000580182 TNS1Q9HBL0 1735 aaKnown RBP25.53■■□□□ 1.68
PPP4R1-215ENST00000580182 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
PPP4R1-215ENST00000580182 BAG6P46379 1132 aa25.5■■□□□ 1.67
PPP4R1-215ENST00000580182 EN1Q05925 392 aaPredicted RBP25.5■■□□□ 1.67
PPP4R1-215ENST00000580182 MEGF6O75095 1541 aa25.49■■□□□ 1.67
PPP4R1-215ENST00000580182 CNGB1Q14028 1251 aaPredicted RBP25.49■■□□□ 1.67
PPP4R1-215ENST00000580182 APBA3O96018 575 aa25.47■■□□□ 1.67
PPP4R1-215ENST00000580182 PTF1AQ7RTS3 328 aa25.47■■□□□ 1.67
PPP4R1-215ENST00000580182 SBF2Q86WG5 1849 aa25.47■■□□□ 1.67
PPP4R1-215ENST00000580182 EIF4A2Q14240 407 aaKnown RBP25.45■■□□□ 1.66
PPP4R1-215ENST00000580182 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
PPP4R1-215ENST00000580182 EYA1Q99502 592 aa25.44■■□□□ 1.66
PPP4R1-215ENST00000580182 BCL9O00512 1426 aa25.44■■□□□ 1.66
PPP4R1-215ENST00000580182 EZH2Q15910 746 aaKnown RBP25.43■■□□□ 1.66
PPP4R1-215ENST00000580182 RAPGEF4Q8WZA2 1011 aa25.42■■□□□ 1.66
PPP4R1-215ENST00000580182 ZCRB1Q8TBF4 217 aaKnown RBP25.41■■□□□ 1.66
PPP4R1-215ENST00000580182 ACSBG1Q96GR2 724 aa25.41■■□□□ 1.66
PPP4R1-215ENST00000580182 CAMKK2Q96RR4 588 aa25.41■■□□□ 1.66
PPP4R1-215ENST00000580182 SHANK3Q9BYB0 1731 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms