RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
SMARCD2-208ENST00000580054 SLIT3O75094 1523 aa13.7□□□□□ -0.22
SMARCD2-208ENST00000580054 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
SMARCD2-208ENST00000580054 PAPPAQ13219 1627 aa13.7□□□□□ -0.22
SMARCD2-208ENST00000580054 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
SMARCD2-208ENST00000580054 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
SMARCD2-208ENST00000580054 DCAF11Q8TEB1 546 aa13.69□□□□□ -0.22
SMARCD2-208ENST00000580054 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
SMARCD2-208ENST00000580054 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
SMARCD2-208ENST00000580054 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
SMARCD2-208ENST00000580054 BCL9O00512 1426 aa13.68□□□□□ -0.22
SMARCD2-208ENST00000580054 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
SMARCD2-208ENST00000580054 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
SMARCD2-208ENST00000580054 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
SMARCD2-208ENST00000580054 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
SMARCD2-208ENST00000580054 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
SMARCD2-208ENST00000580054 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
SMARCD2-208ENST00000580054 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
SMARCD2-208ENST00000580054 NLRP13Q86W25 1043 aa13.67□□□□□ -0.22
SMARCD2-208ENST00000580054 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
SMARCD2-208ENST00000580054 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-208ENST00000580054 BTAF1O14981 1849 aa13.65□□□□□ -0.22
SMARCD2-208ENST00000580054 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
SMARCD2-208ENST00000580054 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 MAP3K5Q99683 1374 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 ARXQ96QS3 562 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 USP6P35125 1406 aa13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-208ENST00000580054 KIAA1210Q9ULL0 1709 aa13.63□□□□□ -0.23
SMARCD2-208ENST00000580054 TRPM1Q7Z4N2 1603 aa13.63□□□□□ -0.23
SMARCD2-208ENST00000580054 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
SMARCD2-208ENST00000580054 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
SMARCD2-208ENST00000580054 NLRP6P59044 892 aa13.62□□□□□ -0.23
SMARCD2-208ENST00000580054 GPR162Q16538 588 aa13.61□□□□□ -0.23
SMARCD2-208ENST00000580054 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
SMARCD2-208ENST00000580054 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
SMARCD2-208ENST00000580054 QSER1Q2KHR3 1735 aa13.61□□□□□ -0.23
SMARCD2-208ENST00000580054 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
SMARCD2-208ENST00000580054 ABCC6O95255 1503 aa13.6□□□□□ -0.23
SMARCD2-208ENST00000580054 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
SMARCD2-208ENST00000580054 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
SMARCD2-208ENST00000580054 ACSBG1Q96GR2 724 aa13.59□□□□□ -0.23
SMARCD2-208ENST00000580054 CDCA7Q9BWT1 371 aaPredicted RBP13.59□□□□□ -0.23
SMARCD2-208ENST00000580054 NFAT5O94916 1531 aa13.59□□□□□ -0.23
SMARCD2-208ENST00000580054 BRD4O60885 1362 aaPredicted RBP13.58□□□□□ -0.23
SMARCD2-208ENST00000580054 SOX12O15370 315 aa13.58□□□□□ -0.24
SMARCD2-208ENST00000580054 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
SMARCD2-208ENST00000580054 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
SMARCD2-208ENST00000580054 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
SMARCD2-208ENST00000580054 EXOC5O00471 708 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 LRRC4BQ9NT99 713 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
SMARCD2-208ENST00000580054 CCDC7Q96M83 1385 aa13.55□□□□□ -0.24
SMARCD2-208ENST00000580054 LTN1O94822 1766 aa13.54□□□□□ -0.24
SMARCD2-208ENST00000580054 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
SMARCD2-208ENST00000580054 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCD2-208ENST00000580054 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
SMARCD2-208ENST00000580054 PNPLA7Q6ZV29 1317 aa13.52□□□□□ -0.25
SMARCD2-208ENST00000580054 ATP10DQ9P241 1426 aa13.52□□□□□ -0.25
SMARCD2-208ENST00000580054 TTC21BQ7Z4L5 1316 aa13.51□□□□□ -0.25
SMARCD2-208ENST00000580054 LY75O60449 1722 aa13.5□□□□□ -0.25
SMARCD2-208ENST00000580054 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
SMARCD2-208ENST00000580054 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
SMARCD2-208ENST00000580054 POLD1P28340 1107 aa13.5□□□□□ -0.25
SMARCD2-208ENST00000580054 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
SMARCD2-208ENST00000580054 KCNQ4P56696 695 aa13.49□□□□□ -0.25
SMARCD2-208ENST00000580054 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
SMARCD2-208ENST00000580054 ERBB3P21860 1342 aa13.48□□□□□ -0.25
SMARCD2-208ENST00000580054 SLC16A10Q8TF71 515 aa13.48□□□□□ -0.25
SMARCD2-208ENST00000580054 IL2RBP14784 551 aa13.47□□□□□ -0.25
SMARCD2-208ENST00000580054 NLRP2Q9NX02 1062 aa13.47□□□□□ -0.25
SMARCD2-208ENST00000580054 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
SMARCD2-208ENST00000580054 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
SMARCD2-208ENST00000580054 ADCY9O60503 1353 aa13.45□□□□□ -0.26
SMARCD2-208ENST00000580054 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
SMARCD2-208ENST00000580054 HSPA6P17066 643 aa13.44□□□□□ -0.26
SMARCD2-208ENST00000580054 SLC27A3Q5K4L6 730 aa13.44□□□□□ -0.26
SMARCD2-208ENST00000580054 ZNF526Q8TF50 670 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-208ENST00000580054 NSD2O96028 1365 aa13.44□□□□□ -0.26
SMARCD2-208ENST00000580054 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
SMARCD2-208ENST00000580054 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
SMARCD2-208ENST00000580054 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
SMARCD2-208ENST00000580054 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
SMARCD2-208ENST00000580054 FAM208AQ9UK61 1670 aaKnown RBP13.43□□□□□ -0.26
SMARCD2-208ENST00000580054 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
SMARCD2-208ENST00000580054 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
SMARCD2-208ENST00000580054 C5P01031 1676 aa13.41□□□□□ -0.26
SMARCD2-208ENST00000580054 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
SMARCD2-208ENST00000580054 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
SMARCD2-208ENST00000580054 NME9Q86XW9 330 aa13.4□□□□□ -0.26
SMARCD2-208ENST00000580054 COL23A1Q86Y22 540 aaPredicted RBP13.4□□□□□ -0.26
SMARCD2-208ENST00000580054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms