RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 DIP2CQ9Y2E4 1556 aa7.76□□□□□ -1.17
RTTN-205ENST00000580034 NUP153P49790 1475 aaKnown RBP7.75□□□□□ -1.17
RTTN-205ENST00000580034 MYO5CQ9NQX4 1742 aa7.75□□□□□ -1.17
RTTN-205ENST00000580034 FMNL1O95466 1100 aaPredicted RBP7.75□□□□□ -1.17
RTTN-205ENST00000580034 MORN1Q5T089 497 aa7.75□□□□□ -1.17
RTTN-205ENST00000580034 RSPH4AQ5TD94 716 aa7.75□□□□□ -1.17
RTTN-205ENST00000580034 TRIM46Q7Z4K8 759 aa7.75□□□□□ -1.17
RTTN-205ENST00000580034 REPIN1Q9BWE0 567 aaKnown RBP7.75□□□□□ -1.17
RTTN-205ENST00000580034 PRDM9Q9NQV7 894 aa7.75□□□□□ -1.17
RTTN-205ENST00000580034 ABCA6Q8N139 1617 aa7.74□□□□□ -1.17
RTTN-205ENST00000580034 FAM161AQ3B820 660 aa7.74□□□□□ -1.17
RTTN-205ENST00000580034 POLR1AO95602 1720 aaPredicted RBP7.74□□□□□ -1.17
RTTN-205ENST00000580034 MROH2AA6NES4 1674 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 CPS1P31327 1500 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 SAMD9Q5K651 1589 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 CEP170BQ9Y4F5 1589 aaPredicted RBP7.73□□□□□ -1.17
RTTN-205ENST00000580034 PLEKHD1A6NEE1 506 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 BMP1P13497 986 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 PLA2R1Q13018 1463 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 ZNF518AQ6AHZ1 1483 aa7.73□□□□□ -1.17
RTTN-205ENST00000580034 REREQ9P2R6 1566 aa7.72□□□□□ -1.17
RTTN-205ENST00000580034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
RTTN-205ENST00000580034 KDM5CP41229 1560 aa7.71□□□□□ -1.17
RTTN-205ENST00000580034 PTPRKQ15262 1439 aa7.71□□□□□ -1.17
RTTN-205ENST00000580034 CNTLNQ9NXG0 1405 aa7.71□□□□□ -1.17
RTTN-205ENST00000580034 TCOF1Q13428 1488 aaKnown RBP7.71□□□□□ -1.18
RTTN-205ENST00000580034 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
RTTN-205ENST00000580034 AGLP35573 1532 aa7.71□□□□□ -1.18
RTTN-205ENST00000580034 NPATQ14207 1427 aa7.7□□□□□ -1.18
RTTN-205ENST00000580034 CLTCQ00610 1675 aaKnown RBP7.7□□□□□ -1.18
RTTN-205ENST00000580034 FECHP22830 423 aa7.7□□□□□ -1.18
RTTN-205ENST00000580034 PTGDRQ13258 359 aa7.7□□□□□ -1.18
RTTN-205ENST00000580034 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
RTTN-205ENST00000580034 RGS17Q9UGC6 210 aaPredicted RBP7.7□□□□□ -1.18
RTTN-205ENST00000580034 SLC27A5Q9Y2P5 690 aa7.7□□□□□ -1.18
RTTN-205ENST00000580034 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
RTTN-205ENST00000580034 ARHGAP5Q13017 1502 aa7.69□□□□□ -1.18
RTTN-205ENST00000580034 CAPN5O15484 640 aaPredicted RBP7.69□□□□□ -1.18
RTTN-205ENST00000580034 ALDH1A1P00352 501 aa7.69□□□□□ -1.18
RTTN-205ENST00000580034 VSIG8P0DPA2 414 aa7.69□□□□□ -1.18
RTTN-205ENST00000580034 BRICD5Q6PL45 260 aa7.69□□□□□ -1.18
RTTN-205ENST00000580034 RNF17Q9BXT8 1623 aaKnown RBP7.69□□□□□ -1.18
RTTN-205ENST00000580034 ALKQ9UM73 1620 aa7.69□□□□□ -1.18
RTTN-205ENST00000580034 PLCH2O75038 1416 aa7.69□□□□□ -1.18
RTTN-205ENST00000580034 SHANK2Q9UPX8 1470 aa7.68□□□□□ -1.18
RTTN-205ENST00000580034 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
RTTN-205ENST00000580034 CDK13Q14004 1512 aaKnown RBP7.68□□□□□ -1.18
RTTN-205ENST00000580034 SRCAPQ6ZRS2 3230 aa7.67□□□□□ -1.18
RTTN-205ENST00000580034 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
RTTN-205ENST00000580034 RANGAP1P46060 587 aaPredicted RBP7.67□□□□□ -1.18
RTTN-205ENST00000580034 FUT2Q10981 343 aa7.67□□□□□ -1.18
RTTN-205ENST00000580034 MSS51Q4VC12 460 aa7.67□□□□□ -1.18
RTTN-205ENST00000580034 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
RTTN-205ENST00000580034 POTEAQ6S8J7 498 aa7.67□□□□□ -1.18
RTTN-205ENST00000580034 AFAP1Q8N556 730 aa7.67□□□□□ -1.18
RTTN-205ENST00000580034 IGHA1P01876 353 aa7.66□□□□□ -1.18
RTTN-205ENST00000580034 EFCAB2Q5VUJ9 269 aa7.66□□□□□ -1.18
RTTN-205ENST00000580034 ZFP42Q96MM3 310 aa7.66□□□□□ -1.18
RTTN-205ENST00000580034 NEURL4Q96JN8 1562 aa7.66□□□□□ -1.18
RTTN-205ENST00000580034 DNMT1P26358 1616 aaKnown RBP7.65□□□□□ -1.18
RTTN-205ENST00000580034 SKOR1P84550 965 aa7.65□□□□□ -1.18
RTTN-205ENST00000580034 ZMYM3Q14202 1370 aa7.65□□□□□ -1.18
RTTN-205ENST00000580034 KIF14Q15058 1648 aa7.65□□□□□ -1.18
RTTN-205ENST00000580034 ITSN2Q9NZM3 1697 aa7.65□□□□□ -1.18
RTTN-205ENST00000580034 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
RTTN-205ENST00000580034 KIDINS220Q9ULH0 1771 aa7.64□□□□□ -1.19
RTTN-205ENST00000580034 SYNMO15061 1565 aa7.64□□□□□ -1.19
RTTN-205ENST00000580034 VWDEQ8N2E2 1590 aa7.64□□□□□ -1.19
RTTN-205ENST00000580034 PRXQ9BXM0 1461 aa7.64□□□□□ -1.19
RTTN-205ENST00000580034 MLH3Q9UHC1 1453 aa7.63□□□□□ -1.19
RTTN-205ENST00000580034 WNT7BP56706 349 aa7.63□□□□□ -1.19
RTTN-205ENST00000580034 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
RTTN-205ENST00000580034 WDR70Q9NW82 654 aa7.63□□□□□ -1.19
RTTN-205ENST00000580034 A2ML1A8K2U0 1454 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 STRCP1A6NGW2 1772 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 CDC42BPBQ9Y5S2 1711 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 MMP16P51512 607 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 RNF19BQ6ZMZ0 732 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 RDH13Q8NBN7 331 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 ABCC1P33527 1531 aa7.62□□□□□ -1.19
RTTN-205ENST00000580034 IQGAP1P46940 1657 aa7.61□□□□□ -1.19
RTTN-205ENST00000580034 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
RTTN-205ENST00000580034 OATP04181 439 aa7.61□□□□□ -1.19
RTTN-205ENST00000580034 DNMT3AQ9Y6K1 912 aaPredicted RBP7.61□□□□□ -1.19
RTTN-205ENST00000580034 WASF2Q9Y6W5 498 aa7.61□□□□□ -1.19
RTTN-205ENST00000580034 PREX2Q70Z35 1606 aa7.6□□□□□ -1.19
RTTN-205ENST00000580034 LRRC7Q96NW7 1537 aa7.59□□□□□ -1.19
RTTN-205ENST00000580034 SIAH2O43255 324 aa7.59□□□□□ -1.19
RTTN-205ENST00000580034 TRIM52Q96A61 297 aa7.59□□□□□ -1.19
RTTN-205ENST00000580034 ATP1B4Q9UN42 357 aaPredicted RBP7.59□□□□□ -1.19
RTTN-205ENST00000580034 SOBPA7XYQ1 873 aa7.58□□□□□ -1.2
RTTN-205ENST00000580034 CCDC24Q8N4L8 307 aa7.58□□□□□ -1.2
RTTN-205ENST00000580034 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
RTTN-205ENST00000580034 NPHP4O75161 1426 aaPredicted RBP7.58□□□□□ -1.2
RTTN-205ENST00000580034 MLLT3P42568 568 aaPredicted RBP7.57□□□□□ -1.2
RTTN-205ENST00000580034 FOXK2Q01167 660 aa7.57□□□□□ -1.2
RTTN-205ENST00000580034 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
RTTN-205ENST00000580034 CLIP1P30622 1438 aa7.57□□□□□ -1.2
RTTN-205ENST00000580034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.57□□□□□ -1.2
RTTN-205ENST00000580034 ROBO1Q9Y6N7 1651 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms