RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 RGPD1P0DJD0 1748 aa33.36■■■□□ 2.93
CDKN2A-214ENST00000579755 NME9Q86XW9 330 aa33.35■■■□□ 2.93
CDKN2A-214ENST00000579755 TESK2Q96S53 571 aa33.34■■■□□ 2.93
CDKN2A-214ENST00000579755 WDR17Q8IZU2 1322 aa33.32■■■□□ 2.93
CDKN2A-214ENST00000579755 CD163L1Q9NR16 1453 aa33.31■■■□□ 2.92
CDKN2A-214ENST00000579755 USP31Q70CQ4 1352 aa33.31■■■□□ 2.92
CDKN2A-214ENST00000579755 EDC4Q6P2E9 1401 aaKnown RBP33.3■■■□□ 2.92
CDKN2A-214ENST00000579755 COL18A1P39060 1754 aa33.3■■■□□ 2.92
CDKN2A-214ENST00000579755 TIMELESSQ9UNS1 1208 aa33.3■■■□□ 2.92
CDKN2A-214ENST00000579755 NINLQ9Y2I6 1382 aa33.29■■■□□ 2.92
CDKN2A-214ENST00000579755 C11orf95C9JLR9 678 aaPredicted RBP33.28■■■□□ 2.92
CDKN2A-214ENST00000579755 APBA3O96018 575 aa33.28■■■□□ 2.92
CDKN2A-214ENST00000579755 TMF1P82094 1093 aa33.28■■■□□ 2.92
CDKN2A-214ENST00000579755 DDB1Q16531 1140 aa33.28■■■□□ 2.92
CDKN2A-214ENST00000579755 A0A1W2PP64 1363 aa33.28■■■□□ 2.92
CDKN2A-214ENST00000579755 USP47Q96K76 1375 aa33.26■■■□□ 2.92
CDKN2A-214ENST00000579755 CDCA7Q9BWT1 371 aaPredicted RBP33.26■■■□□ 2.91
CDKN2A-214ENST00000579755 NFAT5O94916 1531 aa33.25■■■□□ 2.91
CDKN2A-214ENST00000579755 CARD10Q9BWT7 1032 aa33.24■■■□□ 2.91
CDKN2A-214ENST00000579755 RGPD5Q99666 1765 aa33.24■■■□□ 2.91
CDKN2A-214ENST00000579755 PARP4Q9UKK3 1724 aaKnown RBP33.23■■■□□ 2.91
CDKN2A-214ENST00000579755 EZH2Q15910 746 aaKnown RBP33.23■■■□□ 2.91
CDKN2A-214ENST00000579755 DISP2A7MBM2 1401 aa33.21■■■□□ 2.91
CDKN2A-214ENST00000579755 TNS1Q9HBL0 1735 aaKnown RBP33.2■■■□□ 2.91
CDKN2A-214ENST00000579755 CDCA8Q53HL2 280 aa33.2■■■□□ 2.91
CDKN2A-214ENST00000579755 PSDA5PKW4 1024 aaPredicted RBP33.19■■■□□ 2.9
CDKN2A-214ENST00000579755 COG3Q96JB2 828 aa33.18■■■□□ 2.9
CDKN2A-214ENST00000579755 CAMKK2Q96RR4 588 aa33.18■■■□□ 2.9
CDKN2A-214ENST00000579755 NLRP2Q9NX02 1062 aa33.17■■■□□ 2.9
CDKN2A-214ENST00000579755 ABCC6O95255 1503 aa33.17■■■□□ 2.9
CDKN2A-214ENST00000579755 USP54Q70EL1 1684 aa33.17■■■□□ 2.9
CDKN2A-214ENST00000579755 EXOC5O00471 708 aa33.16■■■□□ 2.9
CDKN2A-214ENST00000579755 CCDC7Q96M83 1385 aa33.16■■■□□ 2.9
CDKN2A-214ENST00000579755 OVOS2A0A0G2JMS6 1433 aa33.16■■■□□ 2.9
CDKN2A-214ENST00000579755 OVOS2A0A0J9YW53 1432 aa33.16■■■□□ 2.9
CDKN2A-214ENST00000579755 OVOS2Q6IE36 1432 aa33.16■■■□□ 2.9
CDKN2A-214ENST00000579755 PARD3Q8TEW0 1356 aa33.13■■■□□ 2.89
CDKN2A-214ENST00000579755 LTN1O94822 1766 aa33.13■■■□□ 2.89
CDKN2A-214ENST00000579755 ANKRD36BQ8N2N9 1353 aa33.12■■■□□ 2.89
CDKN2A-214ENST00000579755 LRRC37A3O60309 1634 aa33.12■■■□□ 2.89
CDKN2A-214ENST00000579755 ERBB3P21860 1342 aa33.11■■■□□ 2.89
CDKN2A-214ENST00000579755 R3HDM1Q15032 1099 aaKnown RBP33.11■■■□□ 2.89
CDKN2A-214ENST00000579755 ANKRD24Q8TF21 1146 aa33.11■■■□□ 2.89
CDKN2A-214ENST00000579755 MARCH10Q8NA82 808 aaPredicted RBP33.09■■■□□ 2.89
CDKN2A-214ENST00000579755 WNK3Q9BYP7 1800 aa33.08■■■□□ 2.89
CDKN2A-214ENST00000579755 NBPF14Q5TI25 921 aa33.08■■■□□ 2.89
CDKN2A-214ENST00000579755 IP6K1Q92551 441 aa33.07■■■□□ 2.88
CDKN2A-214ENST00000579755 AMPHP49418 695 aa33.05■■■□□ 2.88
CDKN2A-214ENST00000579755 LTV1Q96GA3 475 aaPredicted RBP33.05■■■□□ 2.88
CDKN2A-214ENST00000579755 BCL11BQ9C0K0 894 aaPredicted RBP33.04■■■□□ 2.88
CDKN2A-214ENST00000579755 IL2RBP14784 551 aa33.03■■■□□ 2.88
CDKN2A-214ENST00000579755 PEAK1Q9H792 1746 aa33.02■■■□□ 2.88
CDKN2A-214ENST00000579755 ZEB1P37275 1124 aaPredicted RBP33.01■■■□□ 2.87
CDKN2A-214ENST00000579755 GGNBP2Q9H3C7 697 aa33.01■■■□□ 2.87
CDKN2A-214ENST00000579755 FYB1O15117 783 aa33■■■□□ 2.87
CDKN2A-214ENST00000579755 MAP3K19Q56UN5 1328 aa32.99■■■□□ 2.87
CDKN2A-214ENST00000579755 PLSCR1O15162 318 aa32.98■■■□□ 2.87
CDKN2A-214ENST00000579755 FBLN1P23142 703 aa32.98■■■□□ 2.87
CDKN2A-214ENST00000579755 SBF2Q86WG5 1849 aa32.98■■■□□ 2.87
CDKN2A-214ENST00000579755 BCL9O00512 1426 aa32.96■■■□□ 2.87
CDKN2A-214ENST00000579755 TNS2Q63HR2 1409 aa32.96■■■□□ 2.87
CDKN2A-214ENST00000579755 HOXC9P31274 260 aa32.96■■■□□ 2.87
CDKN2A-214ENST00000579755 POLR3GLQ9BT43 218 aa32.95■■■□□ 2.87
CDKN2A-214ENST00000579755 RREB1Q92766 1687 aa32.94■■■□□ 2.86
CDKN2A-214ENST00000579755 RRS1Q15050 365 aaKnown RBP32.93■■■□□ 2.86
CDKN2A-214ENST00000579755 PTF1AQ7RTS3 328 aa32.93■■■□□ 2.86
CDKN2A-214ENST00000579755 LRP5O75197 1615 aa32.91■■■□□ 2.86
CDKN2A-214ENST00000579755 EIF4G2P78344 907 aaKnown RBP eCLIP32.9■■■□□ 2.86
CDKN2A-214ENST00000579755 NUP188Q5SRE5 1749 aa32.9■■■□□ 2.86
CDKN2A-214ENST00000579755 ACSBG1Q96GR2 724 aa32.89■■■□□ 2.86
CDKN2A-214ENST00000579755 FAM208AQ9UK61 1670 aaKnown RBP32.88■■■□□ 2.85
CDKN2A-214ENST00000579755 CARD14Q9BXL6 1004 aa32.87■■■□□ 2.85
CDKN2A-214ENST00000579755 RTL1A6NKG5 1358 aa32.86■■■□□ 2.85
CDKN2A-214ENST00000579755 KCNQ2O43526 872 aa32.86■■■□□ 2.85
CDKN2A-214ENST00000579755 DDX54Q8TDD1 881 aaKnown RBP32.86■■■□□ 2.85
CDKN2A-214ENST00000579755 SRCAPQ6ZRS2 3230 aa32.85■■■□□ 2.85
CDKN2A-214ENST00000579755 KIF20BQ96Q89 1820 aa32.85■■■□□ 2.85
CDKN2A-214ENST00000579755 NSD3Q9BZ95 1437 aa32.85■■■□□ 2.85
CDKN2A-214ENST00000579755 SMG6Q86US8 1419 aaKnown RBP32.84■■■□□ 2.85
CDKN2A-214ENST00000579755 RGPD3A6NKT7 1758 aaPredicted RBP32.83■■■□□ 2.85
CDKN2A-214ENST00000579755 RGPD4Q7Z3J3 1758 aa32.83■■■□□ 2.85
CDKN2A-214ENST00000579755 KAT6BQ8WYB5 2073 aa32.81■■■□□ 2.84
CDKN2A-214ENST00000579755 HSPA5P11021 654 aaKnown RBP32.81■■■□□ 2.84
CDKN2A-214ENST00000579755 TXNRD1Q16881 649 aa32.81■■■□□ 2.84
CDKN2A-214ENST00000579755 MYOM1P52179 1685 aa32.81■■■□□ 2.84
CDKN2A-214ENST00000579755 CGNL1Q0VF96 1302 aa32.79■■■□□ 2.84
CDKN2A-214ENST00000579755 PROM2Q8N271 834 aa32.79■■■□□ 2.84
CDKN2A-214ENST00000579755 ZCRB1Q8TBF4 217 aaKnown RBP32.78■■■□□ 2.84
CDKN2A-214ENST00000579755 HSP90AB2PQ58FF8 381 aa32.77■■■□□ 2.84
CDKN2A-214ENST00000579755 NBPF6Q5VWK0 638 aa32.77■■■□□ 2.84
CDKN2A-214ENST00000579755 NBPF4Q96M43 638 aa32.77■■■□□ 2.84
CDKN2A-214ENST00000579755 FLT4P35916 1363 aa32.76■■■□□ 2.83
CDKN2A-214ENST00000579755 PPM1GO15355 546 aaPredicted RBP32.76■■■□□ 2.83
CDKN2A-214ENST00000579755 RAPGEF4Q8WZA2 1011 aa32.76■■■□□ 2.83
CDKN2A-214ENST00000579755 STK32BQ9NY57 414 aa32.76■■■□□ 2.83
CDKN2A-214ENST00000579755 NHSQ6T4R5 1651 aa32.75■■■□□ 2.83
CDKN2A-214ENST00000579755 KIF24Q5T7B8 1368 aa32.75■■■□□ 2.83
CDKN2A-214ENST00000579755 RGPD2P0DJD1 1756 aa32.75■■■□□ 2.83
CDKN2A-214ENST00000579755 INSRP06213 1382 aa32.74■■■□□ 2.83
CDKN2A-214ENST00000579755 USHBP1Q8N6Y0 703 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms