RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
GGA3-208ENST00000579743 PSDA5PKW4 1024 aaPredicted RBP19.33■□□□□ 0.68
GGA3-208ENST00000579743 EZH2Q15910 746 aaKnown RBP19.33■□□□□ 0.68
GGA3-208ENST00000579743 NBPF14Q5TI25 921 aa19.33■□□□□ 0.68
GGA3-208ENST00000579743 CAMKK2Q96RR4 588 aa19.31■□□□□ 0.68
GGA3-208ENST00000579743 R3HDM1Q15032 1099 aaKnown RBP19.3■□□□□ 0.68
GGA3-208ENST00000579743 CARD10Q9BWT7 1032 aa19.3■□□□□ 0.68
GGA3-208ENST00000579743 OVOS2A0A0G2JMS6 1433 aa19.3■□□□□ 0.68
GGA3-208ENST00000579743 OVOS2A0A0J9YW53 1432 aa19.3■□□□□ 0.68
GGA3-208ENST00000579743 OVOS2Q6IE36 1432 aa19.3■□□□□ 0.68
GGA3-208ENST00000579743 TNS1Q9HBL0 1735 aaKnown RBP19.3■□□□□ 0.68
GGA3-208ENST00000579743 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
GGA3-208ENST00000579743 AXIN2Q9Y2T1 843 aa19.29■□□□□ 0.68
GGA3-208ENST00000579743 SLC12A5Q9H2X9 1139 aa19.28■□□□□ 0.68
GGA3-208ENST00000579743 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
GGA3-208ENST00000579743 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.68
GGA3-208ENST00000579743 EXOC5O00471 708 aa19.27■□□□□ 0.68
GGA3-208ENST00000579743 USP31Q70CQ4 1352 aa19.27■□□□□ 0.68
GGA3-208ENST00000579743 CCDC7Q96M83 1385 aa19.27■□□□□ 0.68
GGA3-208ENST00000579743 ABCC6O95255 1503 aa19.26■□□□□ 0.67
GGA3-208ENST00000579743 MON2Q7Z3U7 1717 aa19.26■□□□□ 0.67
GGA3-208ENST00000579743 COL18A1P39060 1754 aa19.25■□□□□ 0.67
GGA3-208ENST00000579743 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
GGA3-208ENST00000579743 NME9Q86XW9 330 aa19.25■□□□□ 0.67
GGA3-208ENST00000579743 LRP5O75197 1615 aa19.25■□□□□ 0.67
GGA3-208ENST00000579743 BCL11BQ9C0K0 894 aaPredicted RBP19.23■□□□□ 0.67
GGA3-208ENST00000579743 NLRP2Q9NX02 1062 aa19.23■□□□□ 0.67
GGA3-208ENST00000579743 NFAT5O94916 1531 aa19.23■□□□□ 0.67
GGA3-208ENST00000579743 PLSCR1O15162 318 aa19.22■□□□□ 0.67
GGA3-208ENST00000579743 CDCA8Q53HL2 280 aa19.22■□□□□ 0.67
GGA3-208ENST00000579743 A0A1W2PP64 1363 aa19.21■□□□□ 0.67
GGA3-208ENST00000579743 TMF1P82094 1093 aa19.21■□□□□ 0.67
GGA3-208ENST00000579743 CD163L1Q9NR16 1453 aa19.21■□□□□ 0.67
GGA3-208ENST00000579743 COG3Q96JB2 828 aa19.2■□□□□ 0.66
GGA3-208ENST00000579743 LRRC37A3O60309 1634 aa19.2■□□□□ 0.66
GGA3-208ENST00000579743 RGPD5Q99666 1765 aa19.19■□□□□ 0.66
GGA3-208ENST00000579743 MARCH10Q8NA82 808 aaPredicted RBP19.19■□□□□ 0.66
GGA3-208ENST00000579743 TESK2Q96S53 571 aa19.19■□□□□ 0.66
GGA3-208ENST00000579743 ERBB3P21860 1342 aa19.19■□□□□ 0.66
GGA3-208ENST00000579743 ANKRD24Q8TF21 1146 aa19.18■□□□□ 0.66
GGA3-208ENST00000579743 TIMELESSQ9UNS1 1208 aa19.18■□□□□ 0.66
GGA3-208ENST00000579743 USP54Q70EL1 1684 aa19.17■□□□□ 0.66
GGA3-208ENST00000579743 BCL9O00512 1426 aa19.17■□□□□ 0.66
GGA3-208ENST00000579743 IL2RBP14784 551 aa19.17■□□□□ 0.66
GGA3-208ENST00000579743 WNK3Q9BYP7 1800 aa19.16■□□□□ 0.66
GGA3-208ENST00000579743 RREB1Q92766 1687 aa19.16■□□□□ 0.66
GGA3-208ENST00000579743 PEAK1Q9H792 1746 aa19.15■□□□□ 0.66
GGA3-208ENST00000579743 IP6K1Q92551 441 aa19.15■□□□□ 0.66
GGA3-208ENST00000579743 USP47Q96K76 1375 aa19.15■□□□□ 0.66
GGA3-208ENST00000579743 AMPHP49418 695 aa19.14■□□□□ 0.65
GGA3-208ENST00000579743 TNS2Q63HR2 1409 aa19.14■□□□□ 0.65
GGA3-208ENST00000579743 LTN1O94822 1766 aa19.14■□□□□ 0.65
GGA3-208ENST00000579743 SPON1Q9HCB6 807 aa19.13■□□□□ 0.65
GGA3-208ENST00000579743 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
GGA3-208ENST00000579743 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
GGA3-208ENST00000579743 ANKRD36BQ8N2N9 1353 aa19.13■□□□□ 0.65
GGA3-208ENST00000579743 NUP188Q5SRE5 1749 aa19.13■□□□□ 0.65
GGA3-208ENST00000579743 SBF2Q86WG5 1849 aa19.12■□□□□ 0.65
GGA3-208ENST00000579743 RGPD3A6NKT7 1758 aaPredicted RBP19.12■□□□□ 0.65
GGA3-208ENST00000579743 RGPD4Q7Z3J3 1758 aa19.12■□□□□ 0.65
GGA3-208ENST00000579743 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
GGA3-208ENST00000579743 LTV1Q96GA3 475 aaPredicted RBP19.1■□□□□ 0.65
GGA3-208ENST00000579743 SRCAPQ6ZRS2 3230 aa19.09■□□□□ 0.65
GGA3-208ENST00000579743 KCNQ2O43526 872 aa19.09■□□□□ 0.65
GGA3-208ENST00000579743 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
GGA3-208ENST00000579743 STK32BQ9NY57 414 aa19.09■□□□□ 0.65
GGA3-208ENST00000579743 TXNRD1Q16881 649 aa19.08■□□□□ 0.64
GGA3-208ENST00000579743 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
GGA3-208ENST00000579743 FAM208AQ9UK61 1670 aaKnown RBP19.06■□□□□ 0.64
GGA3-208ENST00000579743 HOXC9P31274 260 aa19.06■□□□□ 0.64
GGA3-208ENST00000579743 ACSBG1Q96GR2 724 aa19.06■□□□□ 0.64
GGA3-208ENST00000579743 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
GGA3-208ENST00000579743 FYB1O15117 783 aa19.05■□□□□ 0.64
GGA3-208ENST00000579743 PTF1AQ7RTS3 328 aa19.05■□□□□ 0.64
GGA3-208ENST00000579743 DDX54Q8TDD1 881 aaKnown RBP19.05■□□□□ 0.64
GGA3-208ENST00000579743 RTL1A6NKG5 1358 aa19.05■□□□□ 0.64
GGA3-208ENST00000579743 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
GGA3-208ENST00000579743 PROM2Q8N271 834 aa19.02■□□□□ 0.64
GGA3-208ENST00000579743 KAT6BQ8WYB5 2073 aa19.02■□□□□ 0.63
GGA3-208ENST00000579743 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
GGA3-208ENST00000579743 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
GGA3-208ENST00000579743 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
GGA3-208ENST00000579743 SLC15A2Q16348 729 aa19.01■□□□□ 0.63
GGA3-208ENST00000579743 ZCRB1Q8TBF4 217 aaKnown RBP19.01■□□□□ 0.63
GGA3-208ENST00000579743 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
GGA3-208ENST00000579743 ANO8Q9HCE9 1232 aaPredicted RBP19.01■□□□□ 0.63
GGA3-208ENST00000579743 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
GGA3-208ENST00000579743 SYTL4Q96C24 671 aaPredicted RBP18.99■□□□□ 0.63
GGA3-208ENST00000579743 FBLN1P23142 703 aa18.98■□□□□ 0.63
GGA3-208ENST00000579743 HMGB2P26583 209 aaKnown RBP18.98■□□□□ 0.63
GGA3-208ENST00000579743 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
GGA3-208ENST00000579743 SLC27A3Q5K4L6 730 aa18.97■□□□□ 0.63
GGA3-208ENST00000579743 FLT4P35916 1363 aa18.96■□□□□ 0.63
GGA3-208ENST00000579743 ZBTB7AO95365 584 aa18.96■□□□□ 0.63
GGA3-208ENST00000579743 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
GGA3-208ENST00000579743 INSRP06213 1382 aa18.95■□□□□ 0.62
GGA3-208ENST00000579743 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
GGA3-208ENST00000579743 MTFR1LQ9H019 292 aa18.95■□□□□ 0.62
GGA3-208ENST00000579743 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
GGA3-208ENST00000579743 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms