RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 STK32BQ9NY57 414 aa20.53■□□□□ 0.88
CSNK1D-211ENST00000579316 SLC15A2Q16348 729 aa20.52■□□□□ 0.88
CSNK1D-211ENST00000579316 WNK3Q9BYP7 1800 aa20.52■□□□□ 0.88
CSNK1D-211ENST00000579316 CCDC61Q9Y6R9 512 aa20.51■□□□□ 0.87
CSNK1D-211ENST00000579316 NLRP13Q86W25 1043 aa20.5■□□□□ 0.87
CSNK1D-211ENST00000579316 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
CSNK1D-211ENST00000579316 MARCH10Q8NA82 808 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-211ENST00000579316 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
CSNK1D-211ENST00000579316 AKAP12Q02952 1782 aa20.48■□□□□ 0.87
CSNK1D-211ENST00000579316 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-211ENST00000579316 ARXQ96QS3 562 aa20.47■□□□□ 0.87
CSNK1D-211ENST00000579316 CDCA7Q9BWT1 371 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-211ENST00000579316 BRD4O60885 1362 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-211ENST00000579316 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
CSNK1D-211ENST00000579316 SLIT3O75094 1523 aa20.46■□□□□ 0.87
CSNK1D-211ENST00000579316 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-211ENST00000579316 COL18A1P39060 1754 aa20.45■□□□□ 0.86
CSNK1D-211ENST00000579316 PAPPAQ13219 1627 aa20.44■□□□□ 0.86
CSNK1D-211ENST00000579316 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
CSNK1D-211ENST00000579316 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
CSNK1D-211ENST00000579316 DCAF11Q8TEB1 546 aa20.41■□□□□ 0.86
CSNK1D-211ENST00000579316 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
CSNK1D-211ENST00000579316 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
CSNK1D-211ENST00000579316 NHSQ6T4R5 1651 aa20.39■□□□□ 0.86
CSNK1D-211ENST00000579316 GPR162Q16538 588 aa20.39■□□□□ 0.85
CSNK1D-211ENST00000579316 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
CSNK1D-211ENST00000579316 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
CSNK1D-211ENST00000579316 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
CSNK1D-211ENST00000579316 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-211ENST00000579316 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
CSNK1D-211ENST00000579316 COL24A1Q17RW2 1714 aa20.36■□□□□ 0.85
CSNK1D-211ENST00000579316 USP6P35125 1406 aa20.36■□□□□ 0.85
CSNK1D-211ENST00000579316 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
CSNK1D-211ENST00000579316 NLRP6P59044 892 aa20.35■□□□□ 0.85
CSNK1D-211ENST00000579316 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
CSNK1D-211ENST00000579316 PIK3C2AO00443 1686 aa20.34■□□□□ 0.85
CSNK1D-211ENST00000579316 EXOC5O00471 708 aa20.33■□□□□ 0.85
CSNK1D-211ENST00000579316 ABCC6O95255 1503 aa20.32■□□□□ 0.84
CSNK1D-211ENST00000579316 ARHGEF25Q86VW2 580 aa20.32■□□□□ 0.84
CSNK1D-211ENST00000579316 QSER1Q2KHR3 1735 aa20.32■□□□□ 0.84
CSNK1D-211ENST00000579316 CCDC7Q96M83 1385 aa20.32■□□□□ 0.84
CSNK1D-211ENST00000579316 KIAA1210Q9ULL0 1709 aa20.31■□□□□ 0.84
CSNK1D-211ENST00000579316 ZNF827Q17R98 1081 aa20.31■□□□□ 0.84
CSNK1D-211ENST00000579316 SLC16A10Q8TF71 515 aa20.31■□□□□ 0.84
CSNK1D-211ENST00000579316 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
CSNK1D-211ENST00000579316 SRPK2P78362 688 aaKnown RBP20.29■□□□□ 0.84
CSNK1D-211ENST00000579316 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
CSNK1D-211ENST00000579316 BTAF1O14981 1849 aa20.28■□□□□ 0.84
CSNK1D-211ENST00000579316 POLD1P28340 1107 aa20.27■□□□□ 0.84
CSNK1D-211ENST00000579316 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
CSNK1D-211ENST00000579316 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
CSNK1D-211ENST00000579316 KCNH5Q8NCM2 988 aa20.26■□□□□ 0.83
CSNK1D-211ENST00000579316 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
CSNK1D-211ENST00000579316 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
CSNK1D-211ENST00000579316 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
CSNK1D-211ENST00000579316 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
CSNK1D-211ENST00000579316 NFAT5O94916 1531 aa20.25■□□□□ 0.83
CSNK1D-211ENST00000579316 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-211ENST00000579316 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
CSNK1D-211ENST00000579316 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
CSNK1D-211ENST00000579316 ATP10DQ9P241 1426 aa20.24■□□□□ 0.83
CSNK1D-211ENST00000579316 KLHL34Q8N239 644 aa20.23■□□□□ 0.83
CSNK1D-211ENST00000579316 PNPLA7Q6ZV29 1317 aa20.23■□□□□ 0.83
CSNK1D-211ENST00000579316 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
CSNK1D-211ENST00000579316 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
CSNK1D-211ENST00000579316 YBX3P16989 372 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■■■□□ 17
CSNK1D-211ENST00000579316 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
CSNK1D-211ENST00000579316 HSPA6P17066 643 aa20.21■□□□□ 0.83
CSNK1D-211ENST00000579316 TUBGCP6Q96RT7 1819 aa20.2■□□□□ 0.82
CSNK1D-211ENST00000579316 TTC21BQ7Z4L5 1316 aa20.19■□□□□ 0.82
CSNK1D-211ENST00000579316 ADCY9O60503 1353 aa20.19■□□□□ 0.82
CSNK1D-211ENST00000579316 NBPF1Q3BBV0 1214 aa20.17■□□□□ 0.82
CSNK1D-211ENST00000579316 ERBB3P21860 1342 aa20.17■□□□□ 0.82
CSNK1D-211ENST00000579316 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
CSNK1D-211ENST00000579316 IL2RBP14784 551 aa20.16■□□□□ 0.82
CSNK1D-211ENST00000579316 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-211ENST00000579316 GPBP1L1Q9HC44 474 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-211ENST00000579316 KAT6BQ8WYB5 2073 aa20.14■□□□□ 0.81
CSNK1D-211ENST00000579316 SOX12O15370 315 aa20.14■□□□□ 0.81
CSNK1D-211ENST00000579316 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
CSNK1D-211ENST00000579316 NLRP2Q9NX02 1062 aa20.12■□□□□ 0.81
CSNK1D-211ENST00000579316 USP54Q70EL1 1684 aa20.11■□□□□ 0.81
CSNK1D-211ENST00000579316 LY75O60449 1722 aa20.1■□□□□ 0.81
CSNK1D-211ENST00000579316 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
CSNK1D-211ENST00000579316 USP31Q70CQ4 1352 aa20.08■□□□□ 0.81
CSNK1D-211ENST00000579316 CD2APQ9Y5K6 639 aa20.07■□□□□ 0.8
CSNK1D-211ENST00000579316 NSD2O96028 1365 aa20.06■□□□□ 0.8
CSNK1D-211ENST00000579316 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
CSNK1D-211ENST00000579316 LTN1O94822 1766 aa20.06■□□□□ 0.8
CSNK1D-211ENST00000579316 MON2Q7Z3U7 1717 aa20.05■□□□□ 0.8
CSNK1D-211ENST00000579316 KCNQ4P56696 695 aa20.05■□□□□ 0.8
CSNK1D-211ENST00000579316 ANKRD24Q8TF21 1146 aa20.05■□□□□ 0.8
CSNK1D-211ENST00000579316 KTN1Q86UP2 1357 aaKnown RBP20.05■□□□□ 0.8
CSNK1D-211ENST00000579316 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
CSNK1D-211ENST00000579316 DOT1LQ8TEK3 1739 aa20.02■□□□□ 0.8
CSNK1D-211ENST00000579316 KIF3CO14782 793 aa20.02■□□□□ 0.8
CSNK1D-211ENST00000579316 ZNF526Q8TF50 670 aaPredicted RBP20.02■□□□□ 0.8
CSNK1D-211ENST00000579316 PRIM1P49642 420 aaKnown RBP20.01■□□□□ 0.79
CSNK1D-211ENST00000579316 APLP1P51693 650 aa20.01■□□□□ 0.79
CSNK1D-211ENST00000579316 DDX54Q8TDD1 881 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms