RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
TYMS-204ENST00000579128 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
TYMS-204ENST00000579128 TESK2Q96S53 571 aa17.81■□□□□ 0.44
TYMS-204ENST00000579128 PCGF6Q9BYE7 350 aa17.81■□□□□ 0.44
TYMS-204ENST00000579128 SOX12O15370 315 aa17.79■□□□□ 0.44
TYMS-204ENST00000579128 MON2Q7Z3U7 1717 aa17.78■□□□□ 0.44
TYMS-204ENST00000579128 DDB1Q16531 1140 aa17.78■□□□□ 0.44
TYMS-204ENST00000579128 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
TYMS-204ENST00000579128 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
TYMS-204ENST00000579128 USP47Q96K76 1375 aa17.78■□□□□ 0.44
TYMS-204ENST00000579128 FAM182BQ5T319 152 aa17.77■□□□□ 0.44
TYMS-204ENST00000579128 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
TYMS-204ENST00000579128 ABCC6O95255 1503 aa17.77■□□□□ 0.43
TYMS-204ENST00000579128 DISP2A7MBM2 1401 aa17.76■□□□□ 0.43
TYMS-204ENST00000579128 TRIM37O94972 964 aa17.76■□□□□ 0.43
TYMS-204ENST00000579128 NME9Q86XW9 330 aa17.76■□□□□ 0.43
TYMS-204ENST00000579128 AXIN2Q9Y2T1 843 aa17.76■□□□□ 0.43
TYMS-204ENST00000579128 A0A1W2PP64 1363 aa17.76■□□□□ 0.43
TYMS-204ENST00000579128 CCDC7Q96M83 1385 aa17.76■□□□□ 0.43
TYMS-204ENST00000579128 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
TYMS-204ENST00000579128 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
TYMS-204ENST00000579128 APBA3O96018 575 aa17.74■□□□□ 0.43
TYMS-204ENST00000579128 COG3Q96JB2 828 aa17.74■□□□□ 0.43
TYMS-204ENST00000579128 COL18A1P39060 1754 aa17.73■□□□□ 0.43
TYMS-204ENST00000579128 OVOS2A0A0G2JMS6 1433 aa17.72■□□□□ 0.43
TYMS-204ENST00000579128 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
TYMS-204ENST00000579128 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
TYMS-204ENST00000579128 ANKRD36BQ8N2N9 1353 aa17.72■□□□□ 0.43
TYMS-204ENST00000579128 EXOC5O00471 708 aa17.72■□□□□ 0.43
TYMS-204ENST00000579128 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
TYMS-204ENST00000579128 NFAT5O94916 1531 aa17.72■□□□□ 0.43
TYMS-204ENST00000579128 USP54Q70EL1 1684 aa17.71■□□□□ 0.42
TYMS-204ENST00000579128 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
TYMS-204ENST00000579128 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
TYMS-204ENST00000579128 CAMKK2Q96RR4 588 aa17.69■□□□□ 0.42
TYMS-204ENST00000579128 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
TYMS-204ENST00000579128 ERBB3P21860 1342 aa17.69■□□□□ 0.42
TYMS-204ENST00000579128 IP6K1Q92551 441 aa17.68■□□□□ 0.42
TYMS-204ENST00000579128 EZH2Q15910 746 aaKnown RBP17.67■□□□□ 0.42
TYMS-204ENST00000579128 BCL9O00512 1426 aa17.66■□□□□ 0.42
TYMS-204ENST00000579128 AMPHP49418 695 aa17.66■□□□□ 0.42
TYMS-204ENST00000579128 ANKRD24Q8TF21 1146 aa17.66■□□□□ 0.42
TYMS-204ENST00000579128 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
TYMS-204ENST00000579128 PLSCR1O15162 318 aa17.65■□□□□ 0.42
TYMS-204ENST00000579128 IL2RBP14784 551 aa17.65■□□□□ 0.42
TYMS-204ENST00000579128 TNS1Q9HBL0 1735 aaKnown RBP17.64■□□□□ 0.41
TYMS-204ENST00000579128 RGPD5Q99666 1765 aa17.64■□□□□ 0.41
TYMS-204ENST00000579128 LTN1O94822 1766 aa17.63■□□□□ 0.41
TYMS-204ENST00000579128 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
TYMS-204ENST00000579128 FYB1O15117 783 aa17.62■□□□□ 0.41
TYMS-204ENST00000579128 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
TYMS-204ENST00000579128 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
TYMS-204ENST00000579128 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
TYMS-204ENST00000579128 R3HDM1Q15032 1099 aaKnown RBP17.61■□□□□ 0.41
TYMS-204ENST00000579128 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
TYMS-204ENST00000579128 RTL1A6NKG5 1358 aa17.6■□□□□ 0.41
TYMS-204ENST00000579128 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
TYMS-204ENST00000579128 HOXC9P31274 260 aa17.59■□□□□ 0.41
TYMS-204ENST00000579128 GGNBP2Q9H3C7 697 aa17.59■□□□□ 0.41
TYMS-204ENST00000579128 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.41
TYMS-204ENST00000579128 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
TYMS-204ENST00000579128 KIF24Q5T7B8 1368 aa17.58■□□□□ 0.4
TYMS-204ENST00000579128 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
TYMS-204ENST00000579128 PEAK1Q9H792 1746 aa17.58■□□□□ 0.4
TYMS-204ENST00000579128 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
TYMS-204ENST00000579128 FAM208AQ9UK61 1670 aaKnown RBP17.57■□□□□ 0.4
TYMS-204ENST00000579128 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
TYMS-204ENST00000579128 RGPD3A6NKT7 1758 aaPredicted RBP17.54■□□□□ 0.4
TYMS-204ENST00000579128 RGPD4Q7Z3J3 1758 aa17.54■□□□□ 0.4
TYMS-204ENST00000579128 LRP5O75197 1615 aa17.54■□□□□ 0.4
TYMS-204ENST00000579128 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
TYMS-204ENST00000579128 POLR3GLQ9BT43 218 aa17.53■□□□□ 0.4
TYMS-204ENST00000579128 NSD3Q9BZ95 1437 aa17.53■□□□□ 0.4
TYMS-204ENST00000579128 FLT4P35916 1363 aa17.53■□□□□ 0.4
TYMS-204ENST00000579128 HMGB2P26583 209 aaKnown RBP17.52■□□□□ 0.4
TYMS-204ENST00000579128 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.4
TYMS-204ENST00000579128 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
TYMS-204ENST00000579128 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
TYMS-204ENST00000579128 INSRP06213 1382 aa17.52■□□□□ 0.39
TYMS-204ENST00000579128 RREB1Q92766 1687 aa17.52■□□□□ 0.39
TYMS-204ENST00000579128 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
TYMS-204ENST00000579128 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
TYMS-204ENST00000579128 HSPA5P11021 654 aaKnown RBP17.5■□□□□ 0.39
TYMS-204ENST00000579128 FBLN1P23142 703 aa17.5■□□□□ 0.39
TYMS-204ENST00000579128 TXNRD1Q16881 649 aa17.5■□□□□ 0.39
TYMS-204ENST00000579128 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
TYMS-204ENST00000579128 SPON1Q9HCB6 807 aa17.49■□□□□ 0.39
TYMS-204ENST00000579128 STK32BQ9NY57 414 aa17.49■□□□□ 0.39
TYMS-204ENST00000579128 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
TYMS-204ENST00000579128 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
TYMS-204ENST00000579128 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
TYMS-204ENST00000579128 KCNQ2O43526 872 aa17.47■□□□□ 0.39
TYMS-204ENST00000579128 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
TYMS-204ENST00000579128 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
TYMS-204ENST00000579128 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
TYMS-204ENST00000579128 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
TYMS-204ENST00000579128 PROM2Q8N271 834 aa17.46■□□□□ 0.39
TYMS-204ENST00000579128 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
TYMS-204ENST00000579128 SLC27A3Q5K4L6 730 aa17.45■□□□□ 0.38
TYMS-204ENST00000579128 PPP1R1BQ9UD71 204 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms