RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 LTN1O94822 1766 aa16.29■□□□□ 0.2
SSH2-208ENST00000579040 TMC1Q8TDI8 760 aa16.29■□□□□ 0.2
SSH2-208ENST00000579040 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
SSH2-208ENST00000579040 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
SSH2-208ENST00000579040 WDR17Q8IZU2 1322 aa16.28■□□□□ 0.2
SSH2-208ENST00000579040 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
SSH2-208ENST00000579040 TESK2Q96S53 571 aa16.28■□□□□ 0.2
SSH2-208ENST00000579040 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
SSH2-208ENST00000579040 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
SSH2-208ENST00000579040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.2
SSH2-208ENST00000579040 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
SSH2-208ENST00000579040 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
SSH2-208ENST00000579040 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
SSH2-208ENST00000579040 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
SSH2-208ENST00000579040 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
SSH2-208ENST00000579040 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
SSH2-208ENST00000579040 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
SSH2-208ENST00000579040 SOX12O15370 315 aa16.25■□□□□ 0.19
SSH2-208ENST00000579040 TRIM37O94972 964 aa16.25■□□□□ 0.19
SSH2-208ENST00000579040 EN1Q05925 392 aaPredicted RBP16.25■□□□□ 0.19
SSH2-208ENST00000579040 NME9Q86XW9 330 aa16.25■□□□□ 0.19
SSH2-208ENST00000579040 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
SSH2-208ENST00000579040 RREB1Q92766 1687 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 LRP5O75197 1615 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 OVOS2A0A0G2JMS6 1433 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 USP47Q96K76 1375 aa16.24■□□□□ 0.19
SSH2-208ENST00000579040 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
SSH2-208ENST00000579040 RGPD3A6NKT7 1758 aaPredicted RBP16.23■□□□□ 0.19
SSH2-208ENST00000579040 RGPD4Q7Z3J3 1758 aa16.23■□□□□ 0.19
SSH2-208ENST00000579040 CSB-PGBD3P0DP91 1061 aa16.22■□□□□ 0.19
SSH2-208ENST00000579040 DDB1Q16531 1140 aa16.22■□□□□ 0.19
SSH2-208ENST00000579040 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
SSH2-208ENST00000579040 APBA3O96018 575 aa16.21■□□□□ 0.19
SSH2-208ENST00000579040 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
SSH2-208ENST00000579040 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.18
SSH2-208ENST00000579040 TMF1P82094 1093 aa16.2■□□□□ 0.18
SSH2-208ENST00000579040 EZH2Q15910 746 aaKnown RBP16.2■□□□□ 0.18
SSH2-208ENST00000579040 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
SSH2-208ENST00000579040 BCL9O00512 1426 aa16.19■□□□□ 0.18
SSH2-208ENST00000579040 ERBB3P21860 1342 aa16.19■□□□□ 0.18
SSH2-208ENST00000579040 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
SSH2-208ENST00000579040 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
SSH2-208ENST00000579040 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
SSH2-208ENST00000579040 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
SSH2-208ENST00000579040 MARCH10Q8NA82 808 aaPredicted RBP16.15■□□□□ 0.18
SSH2-208ENST00000579040 COG3Q96JB2 828 aa16.15■□□□□ 0.18
SSH2-208ENST00000579040 MYOM1P52179 1685 aa16.14■□□□□ 0.18
SSH2-208ENST00000579040 EXOC5O00471 708 aa16.14■□□□□ 0.17
SSH2-208ENST00000579040 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
SSH2-208ENST00000579040 ANKRD24Q8TF21 1146 aa16.14■□□□□ 0.17
SSH2-208ENST00000579040 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
SSH2-208ENST00000579040 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
SSH2-208ENST00000579040 PLSCR1O15162 318 aa16.13■□□□□ 0.17
SSH2-208ENST00000579040 IP6K1Q92551 441 aa16.13■□□□□ 0.17
SSH2-208ENST00000579040 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
SSH2-208ENST00000579040 SRCAPQ6ZRS2 3230 aa16.13■□□□□ 0.17
SSH2-208ENST00000579040 KAT6BQ8WYB5 2073 aa16.12■□□□□ 0.17
SSH2-208ENST00000579040 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
SSH2-208ENST00000579040 IL2RBP14784 551 aa16.11■□□□□ 0.17
SSH2-208ENST00000579040 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
SSH2-208ENST00000579040 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
SSH2-208ENST00000579040 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
SSH2-208ENST00000579040 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
SSH2-208ENST00000579040 FYB1O15117 783 aa16.08■□□□□ 0.16
SSH2-208ENST00000579040 HOXC9P31274 260 aa16.08■□□□□ 0.16
SSH2-208ENST00000579040 AMPHP49418 695 aa16.08■□□□□ 0.16
SSH2-208ENST00000579040 BTAF1O14981 1849 aa16.06■□□□□ 0.16
SSH2-208ENST00000579040 PTF1AQ7RTS3 328 aa16.06■□□□□ 0.16
SSH2-208ENST00000579040 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
SSH2-208ENST00000579040 NSD3Q9BZ95 1437 aa16.04■□□□□ 0.16
SSH2-208ENST00000579040 KIF24Q5T7B8 1368 aa16.04■□□□□ 0.16
SSH2-208ENST00000579040 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
SSH2-208ENST00000579040 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
SSH2-208ENST00000579040 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
SSH2-208ENST00000579040 ANKRD26Q9UPS8 1709 aa16.03■□□□□ 0.16
SSH2-208ENST00000579040 FBLN1P23142 703 aa16.03■□□□□ 0.16
SSH2-208ENST00000579040 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
SSH2-208ENST00000579040 CASZ1Q86V15 1759 aa16.03■□□□□ 0.16
SSH2-208ENST00000579040 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
SSH2-208ENST00000579040 CARD14Q9BXL6 1004 aa16.02■□□□□ 0.16
SSH2-208ENST00000579040 INSRP06213 1382 aa16.01■□□□□ 0.15
SSH2-208ENST00000579040 FLT4P35916 1363 aa16.01■□□□□ 0.15
SSH2-208ENST00000579040 KCNQ2O43526 872 aa16.01■□□□□ 0.15
SSH2-208ENST00000579040 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
SSH2-208ENST00000579040 PROM2Q8N271 834 aa16.01■□□□□ 0.15
SSH2-208ENST00000579040 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
SSH2-208ENST00000579040 DOT1LQ8TEK3 1739 aa16■□□□□ 0.15
SSH2-208ENST00000579040 EIF4G2P78344 907 aaKnown RBP eCLIP16■□□□□ 0.151e-10■■■■■ 44.8
SSH2-208ENST00000579040 ANO8Q9HCE9 1232 aaPredicted RBP16■□□□□ 0.15
SSH2-208ENST00000579040 MEGF6O75095 1541 aa15.99■□□□□ 0.15
SSH2-208ENST00000579040 CGNL1Q0VF96 1302 aa15.99■□□□□ 0.15
SSH2-208ENST00000579040 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
SSH2-208ENST00000579040 PAPPAQ13219 1627 aa15.98■□□□□ 0.15
SSH2-208ENST00000579040 SPON1Q9HCB6 807 aa15.98■□□□□ 0.15
SSH2-208ENST00000579040 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
SSH2-208ENST00000579040 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms