RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 ATP7BP35670 1465 aa13.15□□□□□ -0.3
SNX11-205ENST00000578861 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
SNX11-205ENST00000578861 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
SNX11-205ENST00000578861 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
SNX11-205ENST00000578861 TRPM3Q9HCF6 1732 aaPredicted RBP13.14□□□□□ -0.31
SNX11-205ENST00000578861 ABTB2Q8N961 1025 aa13.14□□□□□ -0.31
SNX11-205ENST00000578861 ADCY9O60503 1353 aa13.14□□□□□ -0.31
SNX11-205ENST00000578861 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
SNX11-205ENST00000578861 AATKQ6ZMQ8 1374 aa13.13□□□□□ -0.31
SNX11-205ENST00000578861 CRB1P82279 1406 aa13.13□□□□□ -0.31
SNX11-205ENST00000578861 EXOC5O00471 708 aa13.12□□□□□ -0.31
SNX11-205ENST00000578861 PEAK1Q9H792 1746 aa13.11□□□□□ -0.31
SNX11-205ENST00000578861 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
SNX11-205ENST00000578861 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
SNX11-205ENST00000578861 LRRC4BQ9NT99 713 aa13.11□□□□□ -0.31
SNX11-205ENST00000578861 GCP02774 474 aa13.1□□□□□ -0.31
SNX11-205ENST00000578861 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
SNX11-205ENST00000578861 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
SNX11-205ENST00000578861 MSL1Q68DK7 614 aa13.1□□□□□ -0.31
SNX11-205ENST00000578861 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
SNX11-205ENST00000578861 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
SNX11-205ENST00000578861 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
SNX11-205ENST00000578861 PNPLA7Q6ZV29 1317 aa13.1□□□□□ -0.31
SNX11-205ENST00000578861 WASLO00401 505 aaPredicted RBP13.09□□□□□ -0.31
SNX11-205ENST00000578861 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
SNX11-205ENST00000578861 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
SNX11-205ENST00000578861 PARP4Q9UKK3 1724 aaKnown RBP13.09□□□□□ -0.31
SNX11-205ENST00000578861 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
SNX11-205ENST00000578861 CPDO75976 1380 aa13.08□□□□□ -0.31
SNX11-205ENST00000578861 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.31
SNX11-205ENST00000578861 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
SNX11-205ENST00000578861 SPATA31E1Q6ZUB1 1445 aa13.08□□□□□ -0.32
SNX11-205ENST00000578861 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
SNX11-205ENST00000578861 KCNQ4P56696 695 aa13.08□□□□□ -0.32
SNX11-205ENST00000578861 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
SNX11-205ENST00000578861 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
SNX11-205ENST00000578861 BCL9O00512 1426 aa13.06□□□□□ -0.32
SNX11-205ENST00000578861 CRYBG1Q9Y4K1 1723 aa13.06□□□□□ -0.32
SNX11-205ENST00000578861 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
SNX11-205ENST00000578861 NLRP13Q86W25 1043 aa13.06□□□□□ -0.32
SNX11-205ENST00000578861 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
SNX11-205ENST00000578861 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
SNX11-205ENST00000578861 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
SNX11-205ENST00000578861 PIK3C2GO75747 1445 aa13.05□□□□□ -0.32
SNX11-205ENST00000578861 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
SNX11-205ENST00000578861 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
SNX11-205ENST00000578861 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
SNX11-205ENST00000578861 ACEP12821 1306 aa13.03□□□□□ -0.32
SNX11-205ENST00000578861 USP6P35125 1406 aa13.03□□□□□ -0.32
SNX11-205ENST00000578861 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.32
SNX11-205ENST00000578861 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
SNX11-205ENST00000578861 WDR17Q8IZU2 1322 aa13.02□□□□□ -0.33
SNX11-205ENST00000578861 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
SNX11-205ENST00000578861 FSTL1Q12841 308 aa13.01□□□□□ -0.33
SNX11-205ENST00000578861 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
SNX11-205ENST00000578861 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
SNX11-205ENST00000578861 USP19O94966 1318 aa13.01□□□□□ -0.33
SNX11-205ENST00000578861 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
SNX11-205ENST00000578861 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
SNX11-205ENST00000578861 LMO7Q8WWI1 1683 aa13□□□□□ -0.33
SNX11-205ENST00000578861 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
SNX11-205ENST00000578861 NLRP6P59044 892 aa12.99□□□□□ -0.33
SNX11-205ENST00000578861 SOX12O15370 315 aa12.98□□□□□ -0.33
SNX11-205ENST00000578861 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
SNX11-205ENST00000578861 WDR90Q96KV7 1748 aa12.98□□□□□ -0.33
SNX11-205ENST00000578861 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
SNX11-205ENST00000578861 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
SNX11-205ENST00000578861 PCNTO95613 3336 aa12.97□□□□□ -0.33
SNX11-205ENST00000578861 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.33
SNX11-205ENST00000578861 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
SNX11-205ENST00000578861 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
SNX11-205ENST00000578861 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
SNX11-205ENST00000578861 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
SNX11-205ENST00000578861 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
SNX11-205ENST00000578861 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
SNX11-205ENST00000578861 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
SNX11-205ENST00000578861 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
SNX11-205ENST00000578861 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
SNX11-205ENST00000578861 SMC1BQ8NDV3 1235 aa12.92□□□□□ -0.34
SNX11-205ENST00000578861 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
SNX11-205ENST00000578861 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
SNX11-205ENST00000578861 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
SNX11-205ENST00000578861 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
SNX11-205ENST00000578861 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
SNX11-205ENST00000578861 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
SNX11-205ENST00000578861 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
SNX11-205ENST00000578861 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
SNX11-205ENST00000578861 ADGRB1O14514 1584 aa12.9□□□□□ -0.35
SNX11-205ENST00000578861 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
SNX11-205ENST00000578861 PPIP5K1Q6PFW1 1433 aa12.89□□□□□ -0.35
SNX11-205ENST00000578861 ARHGEF28Q8N1W1 1705 aaKnown RBP12.89□□□□□ -0.35
SNX11-205ENST00000578861 FOXN1O15353 648 aa12.89□□□□□ -0.35
SNX11-205ENST00000578861 IL2RBP14784 551 aa12.89□□□□□ -0.35
SNX11-205ENST00000578861 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
SNX11-205ENST00000578861 ARHGEF25Q86VW2 580 aa12.88□□□□□ -0.35
SNX11-205ENST00000578861 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
SNX11-205ENST00000578861 CCDC85CA6NKD9 419 aa12.87□□□□□ -0.35
SNX11-205ENST00000578861 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
SNX11-205ENST00000578861 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
SNX11-205ENST00000578861 FLAD1Q8NFF5 587 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms