RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 ZNF692Q9BU19 519 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-205ENST00000578415 ROCK2O75116 1388 aaKnown RBP30.15■■■□□ 2.42
TSEN54-205ENST00000578415 PLSCR1O15162 318 aa30.14■■■□□ 2.42
TSEN54-205ENST00000578415 MARCH10Q8NA82 808 aaPredicted RBP30.13■■■□□ 2.41
TSEN54-205ENST00000578415 KCNH5Q8NCM2 988 aa30.12■■■□□ 2.41
TSEN54-205ENST00000578415 BCL11BQ9C0K0 894 aaPredicted RBP30.12■■■□□ 2.41
TSEN54-205ENST00000578415 SPON1Q9HCB6 807 aa30.12■■■□□ 2.41
TSEN54-205ENST00000578415 RGPD3A6NKT7 1758 aaPredicted RBP30.12■■■□□ 2.41
TSEN54-205ENST00000578415 RGPD4Q7Z3J3 1758 aa30.12■■■□□ 2.41
TSEN54-205ENST00000578415 SOX12O15370 315 aa30.11■■■□□ 2.41
TSEN54-205ENST00000578415 ANO8Q9HCE9 1232 aaPredicted RBP30.11■■■□□ 2.41
TSEN54-205ENST00000578415 TTC21AQ8NDW8 1320 aa30.11■■■□□ 2.41
TSEN54-205ENST00000578415 SBF2Q86WG5 1849 aa30.1■■■□□ 2.41
TSEN54-205ENST00000578415 KCNQ2O43526 872 aa30.1■■■□□ 2.41
TSEN54-205ENST00000578415 CDCA7Q9BWT1 371 aaPredicted RBP30.1■■■□□ 2.41
TSEN54-205ENST00000578415 BCL9O00512 1426 aa30.1■■■□□ 2.41
TSEN54-205ENST00000578415 WNK3Q9BYP7 1800 aa30.1■■■□□ 2.41
TSEN54-205ENST00000578415 NFAT5O94916 1531 aa30.09■■■□□ 2.41
TSEN54-205ENST00000578415 AKAP12Q02952 1782 aa30.09■■■□□ 2.41
TSEN54-205ENST00000578415 CARD10Q9BWT7 1032 aa30.09■■■□□ 2.41
TSEN54-205ENST00000578415 CSB-PGBD3P0DP91 1061 aa30.06■■■□□ 2.4
TSEN54-205ENST00000578415 NEUROD1Q13562 356 aa30.06■■■□□ 2.4
TSEN54-205ENST00000578415 PROM2Q8N271 834 aa30.06■■■□□ 2.4
TSEN54-205ENST00000578415 KTN1Q86UP2 1357 aaKnown RBP30.05■■■□□ 2.4
TSEN54-205ENST00000578415 PPP1R1BQ9UD71 204 aaPredicted RBP30.05■■■□□ 2.4
TSEN54-205ENST00000578415 RGPD5Q99666 1765 aa30.03■■■□□ 2.4
TSEN54-205ENST00000578415 NINLQ9Y2I6 1382 aa30.02■■■□□ 2.4
TSEN54-205ENST00000578415 CCDC7Q96M83 1385 aa30.01■■■□□ 2.39
TSEN54-205ENST00000578415 ABCC6O95255 1503 aa30.01■■■□□ 2.39
TSEN54-205ENST00000578415 PDGFDQ9GZP0 370 aaPredicted RBP30■■■□□ 2.39
TSEN54-205ENST00000578415 CASZ1Q86V15 1759 aa30■■■□□ 2.39
TSEN54-205ENST00000578415 EXOC5O00471 708 aa29.99■■■□□ 2.39
TSEN54-205ENST00000578415 SBNO2Q9Y2G9 1366 aa29.99■■■□□ 2.39
TSEN54-205ENST00000578415 USP31Q70CQ4 1352 aa29.98■■■□□ 2.39
TSEN54-205ENST00000578415 TNS2Q63HR2 1409 aa29.97■■■□□ 2.39
TSEN54-205ENST00000578415 MON2Q7Z3U7 1717 aa29.97■■■□□ 2.39
TSEN54-205ENST00000578415 YY1P25490 414 aa29.97■■■□□ 2.39
TSEN54-205ENST00000578415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.97■■■□□ 2.39
TSEN54-205ENST00000578415 CD163L1Q9NR16 1453 aa29.97■■■□□ 2.39
TSEN54-205ENST00000578415 TXNRD1Q16881 649 aa29.95■■■□□ 2.39
TSEN54-205ENST00000578415 NME9Q86XW9 330 aa29.94■■■□□ 2.38
TSEN54-205ENST00000578415 ERBB3P21860 1342 aa29.94■■■□□ 2.38
TSEN54-205ENST00000578415 ZBTB7AO95365 584 aa29.92■■■□□ 2.38
TSEN54-205ENST00000578415 USP54Q70EL1 1684 aa29.91■■■□□ 2.38
TSEN54-205ENST00000578415 PTGER2P43116 358 aa29.9■■■□□ 2.38
TSEN54-205ENST00000578415 CARD11Q9BXL7 1154 aa29.89■■■□□ 2.38
TSEN54-205ENST00000578415 STK32BQ9NY57 414 aa29.89■■■□□ 2.38
TSEN54-205ENST00000578415 SLC15A2Q16348 729 aa29.88■■■□□ 2.37
TSEN54-205ENST00000578415 NLRP2Q9NX02 1062 aa29.88■■■□□ 2.37
TSEN54-205ENST00000578415 TMC1Q8TDI8 760 aa29.87■■■□□ 2.37
TSEN54-205ENST00000578415 SLC12A5Q9H2X9 1139 aa29.87■■■□□ 2.37
TSEN54-205ENST00000578415 ACSBG1Q96GR2 724 aa29.86■■■□□ 2.37
TSEN54-205ENST00000578415 NHSQ6T4R5 1651 aa29.85■■■□□ 2.37
TSEN54-205ENST00000578415 DCAF8L1A6NGE4 600 aa29.85■■■□□ 2.37
TSEN54-205ENST00000578415 ATF5Q9Y2D1 282 aaPredicted RBP29.85■■■□□ 2.37
TSEN54-205ENST00000578415 IL2RBP14784 551 aa29.84■■■□□ 2.37
TSEN54-205ENST00000578415 HDGFL2Q7Z4V5 671 aaPredicted RBP29.84■■■□□ 2.37
TSEN54-205ENST00000578415 ANKRD24Q8TF21 1146 aa29.84■■■□□ 2.37
TSEN54-205ENST00000578415 EDC4Q6P2E9 1401 aaKnown RBP29.84■■■□□ 2.37
TSEN54-205ENST00000578415 MYOM1P52179 1685 aa29.84■■■□□ 2.37
TSEN54-205ENST00000578415 A0A1W2PP64 1363 aa29.82■■■□□ 2.36
TSEN54-205ENST00000578415 LTN1O94822 1766 aa29.81■■■□□ 2.36
TSEN54-205ENST00000578415 SGIP1Q9BQI5 828 aa29.78■■■□□ 2.36
TSEN54-205ENST00000578415 MTFR1LQ9H019 292 aa29.78■■■□□ 2.36
TSEN54-205ENST00000578415 TERF2IPQ9NYB0 399 aa29.78■■■□□ 2.36
TSEN54-205ENST00000578415 PAPPAQ13219 1627 aa29.78■■■□□ 2.36
TSEN54-205ENST00000578415 PUS7Q96PZ0 661 aaKnown RBP29.76■■■□□ 2.35
TSEN54-205ENST00000578415 FHDC1Q9C0D6 1143 aaPredicted RBP29.75■■■□□ 2.35
TSEN54-205ENST00000578415 SYT17Q9BSW7 474 aa29.74■■■□□ 2.35
TSEN54-205ENST00000578415 IP6K1Q92551 441 aa29.73■■■□□ 2.35
TSEN54-205ENST00000578415 BTAF1O14981 1849 aa29.73■■■□□ 2.35
TSEN54-205ENST00000578415 ZNF827Q17R98 1081 aa29.72■■■□□ 2.35
TSEN54-205ENST00000578415 LRRC4BQ9NT99 713 aa29.72■■■□□ 2.35
TSEN54-205ENST00000578415 TONSLQ96HA7 1378 aa29.71■■■□□ 2.35
TSEN54-205ENST00000578415 TESK2Q96S53 571 aa29.7■■■□□ 2.35
TSEN54-205ENST00000578415 LTV1Q96GA3 475 aaPredicted RBP29.68■■■□□ 2.34
TSEN54-205ENST00000578415 DDX54Q8TDD1 881 aaKnown RBP29.67■■■□□ 2.34
TSEN54-205ENST00000578415 MAP3K19Q56UN5 1328 aa29.66■■■□□ 2.34
TSEN54-205ENST00000578415 UTRNP46939 3433 aa29.65■■■□□ 2.34
TSEN54-205ENST00000578415 ARXQ96QS3 562 aa29.65■■■□□ 2.34
TSEN54-205ENST00000578415 FBLN1P23142 703 aa29.64■■■□□ 2.34
TSEN54-205ENST00000578415 AKT1S1Q96B36 256 aa29.64■■■□□ 2.34
TSEN54-205ENST00000578415 ST20-MTHFSA0A0A6YYL1 179 aa29.63■■■□□ 2.33
TSEN54-205ENST00000578415 COG3Q96JB2 828 aa29.63■■■□□ 2.33
TSEN54-205ENST00000578415 FAM208AQ9UK61 1670 aaKnown RBP29.63■■■□□ 2.33
TSEN54-205ENST00000578415 HOXC9P31274 260 aa29.62■■■□□ 2.33
TSEN54-205ENST00000578415 MAP3K5Q99683 1374 aa29.62■■■□□ 2.33
TSEN54-205ENST00000578415 SLC27A3Q5K4L6 730 aa29.61■■■□□ 2.33
TSEN54-205ENST00000578415 ZNF784Q8NCA9 323 aaPredicted RBP29.6■■■□□ 2.33
TSEN54-205ENST00000578415 AMPHP49418 695 aa29.58■■■□□ 2.33
TSEN54-205ENST00000578415 PRIM1P49642 420 aaKnown RBP29.58■■■□□ 2.33
TSEN54-205ENST00000578415 ANKRD36BQ8N2N9 1353 aa29.58■■■□□ 2.33
TSEN54-205ENST00000578415 NSD2O96028 1365 aa29.57■■■□□ 2.32
TSEN54-205ENST00000578415 KAT6BQ8WYB5 2073 aa29.57■■■□□ 2.32
TSEN54-205ENST00000578415 MEGF6O75095 1541 aa29.56■■■□□ 2.32
TSEN54-205ENST00000578415 PNPLA7Q6ZV29 1317 aa29.56■■■□□ 2.32
TSEN54-205ENST00000578415 KCNQ4P56696 695 aa29.56■■■□□ 2.32
TSEN54-205ENST00000578415 SYTL4Q96C24 671 aaPredicted RBP29.56■■■□□ 2.32
TSEN54-205ENST00000578415 SLC16A10Q8TF71 515 aa29.55■■■□□ 2.32
TSEN54-205ENST00000578415 ZCRB1Q8TBF4 217 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms