RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
SMARCE1-214ENST00000578112 CCDC7Q96M83 1385 aa16.14■□□□□ 0.17
SMARCE1-214ENST00000578112 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
SMARCE1-214ENST00000578112 NLRP6P59044 892 aa16.13■□□□□ 0.17
SMARCE1-214ENST00000578112 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
SMARCE1-214ENST00000578112 NFAT5O94916 1531 aa16.12■□□□□ 0.17
SMARCE1-214ENST00000578112 EP400Q96L91 3159 aa16.12■□□□□ 0.17
SMARCE1-214ENST00000578112 USP31Q70CQ4 1352 aa16.12■□□□□ 0.17
SMARCE1-214ENST00000578112 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
SMARCE1-214ENST00000578112 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
SMARCE1-214ENST00000578112 DDB1Q16531 1140 aa16.11■□□□□ 0.17
SMARCE1-214ENST00000578112 TTC21BQ7Z4L5 1316 aa16.11■□□□□ 0.17
SMARCE1-214ENST00000578112 ARHGEF25Q86VW2 580 aa16.11■□□□□ 0.17
SMARCE1-214ENST00000578112 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
SMARCE1-214ENST00000578112 CARD10Q9BWT7 1032 aa16.11■□□□□ 0.17
SMARCE1-214ENST00000578112 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
SMARCE1-214ENST00000578112 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
SMARCE1-214ENST00000578112 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
SMARCE1-214ENST00000578112 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
SMARCE1-214ENST00000578112 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.17
SMARCE1-214ENST00000578112 KCNQ2O43526 872 aa16.08■□□□□ 0.16
SMARCE1-214ENST00000578112 NHSQ6T4R5 1651 aa16.08■□□□□ 0.16
SMARCE1-214ENST00000578112 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
SMARCE1-214ENST00000578112 FAM208AQ9UK61 1670 aaKnown RBP16.07■□□□□ 0.16
SMARCE1-214ENST00000578112 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
SMARCE1-214ENST00000578112 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
SMARCE1-214ENST00000578112 KTN1Q86UP2 1357 aaKnown RBP16.05■□□□□ 0.16
SMARCE1-214ENST00000578112 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
SMARCE1-214ENST00000578112 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.16
SMARCE1-214ENST00000578112 EXOC5O00471 708 aa16.01■□□□□ 0.15
SMARCE1-214ENST00000578112 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-214ENST00000578112 PPP1R1BQ9UD71 204 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-214ENST00000578112 LTN1O94822 1766 aa16.01■□□□□ 0.15
SMARCE1-214ENST00000578112 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
SMARCE1-214ENST00000578112 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
SMARCE1-214ENST00000578112 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
SMARCE1-214ENST00000578112 CSB-PGBD3P0DP91 1061 aa16■□□□□ 0.15
SMARCE1-214ENST00000578112 PAPPAQ13219 1627 aa15.99■□□□□ 0.15
SMARCE1-214ENST00000578112 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-214ENST00000578112 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
SMARCE1-214ENST00000578112 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
SMARCE1-214ENST00000578112 ERBB3P21860 1342 aa15.97■□□□□ 0.15
SMARCE1-214ENST00000578112 TERF2IPQ9NYB0 399 aa15.97■□□□□ 0.15
SMARCE1-214ENST00000578112 MAP3K5Q99683 1374 aa15.96■□□□□ 0.15
SMARCE1-214ENST00000578112 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-214ENST00000578112 TXNRD1Q16881 649 aa15.95■□□□□ 0.14
SMARCE1-214ENST00000578112 COL24A1Q17RW2 1714 aa15.95■□□□□ 0.14
SMARCE1-214ENST00000578112 MYOM1P52179 1685 aa15.95■□□□□ 0.14
SMARCE1-214ENST00000578112 IL2RBP14784 551 aa15.94■□□□□ 0.14
SMARCE1-214ENST00000578112 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
SMARCE1-214ENST00000578112 YY1P25490 414 aa15.94■□□□□ 0.14
SMARCE1-214ENST00000578112 PROM2Q8N271 834 aa15.94■□□□□ 0.14
SMARCE1-214ENST00000578112 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
SMARCE1-214ENST00000578112 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
SMARCE1-214ENST00000578112 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
SMARCE1-214ENST00000578112 BTAF1O14981 1849 aa15.93■□□□□ 0.14
SMARCE1-214ENST00000578112 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
SMARCE1-214ENST00000578112 RTL1A6NKG5 1358 aa15.91■□□□□ 0.14
SMARCE1-214ENST00000578112 PTGER2P43116 358 aa15.9■□□□□ 0.14
SMARCE1-214ENST00000578112 SLC27A3Q5K4L6 730 aa15.9■□□□□ 0.14
SMARCE1-214ENST00000578112 ANKRD24Q8TF21 1146 aa15.9■□□□□ 0.14
SMARCE1-214ENST00000578112 IP6K1Q92551 441 aa15.9■□□□□ 0.14
SMARCE1-214ENST00000578112 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
SMARCE1-214ENST00000578112 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
SMARCE1-214ENST00000578112 A0A1W2PP64 1363 aa15.89■□□□□ 0.14
SMARCE1-214ENST00000578112 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
SMARCE1-214ENST00000578112 NLRP2Q9NX02 1062 aa15.89■□□□□ 0.13
SMARCE1-214ENST00000578112 NME9Q86XW9 330 aa15.88■□□□□ 0.13
SMARCE1-214ENST00000578112 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
SMARCE1-214ENST00000578112 SGIP1Q9BQI5 828 aa15.87■□□□□ 0.13
SMARCE1-214ENST00000578112 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
SMARCE1-214ENST00000578112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMARCE1-214ENST00000578112 LY75O60449 1722 aa15.86■□□□□ 0.13
SMARCE1-214ENST00000578112 PTF1AQ7RTS3 328 aa15.86■□□□□ 0.13
SMARCE1-214ENST00000578112 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
SMARCE1-214ENST00000578112 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
SMARCE1-214ENST00000578112 SOX12O15370 315 aa15.85■□□□□ 0.13
SMARCE1-214ENST00000578112 CHD4Q14839 1912 aa15.84■□□□□ 0.13
SMARCE1-214ENST00000578112 COG3Q96JB2 828 aa15.84■□□□□ 0.13
SMARCE1-214ENST00000578112 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
SMARCE1-214ENST00000578112 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
SMARCE1-214ENST00000578112 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
SMARCE1-214ENST00000578112 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
SMARCE1-214ENST00000578112 TESK2Q96S53 571 aa15.82■□□□□ 0.12
SMARCE1-214ENST00000578112 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
SMARCE1-214ENST00000578112 SYT17Q9BSW7 474 aa15.82■□□□□ 0.12
SMARCE1-214ENST00000578112 SMG6Q86US8 1419 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-214ENST00000578112 ARXQ96QS3 562 aa15.81■□□□□ 0.12
SMARCE1-214ENST00000578112 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
SMARCE1-214ENST00000578112 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
SMARCE1-214ENST00000578112 PLEKHG2Q9H7P9 1386 aa15.8■□□□□ 0.12
SMARCE1-214ENST00000578112 HOXC9P31274 260 aa15.8■□□□□ 0.12
SMARCE1-214ENST00000578112 NSD2O96028 1365 aa15.8■□□□□ 0.12
SMARCE1-214ENST00000578112 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
SMARCE1-214ENST00000578112 FHDC1Q9C0D6 1143 aaPredicted RBP15.79■□□□□ 0.12
SMARCE1-214ENST00000578112 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
SMARCE1-214ENST00000578112 POLD1P28340 1107 aa15.78■□□□□ 0.12
SMARCE1-214ENST00000578112 MAP3K19Q56UN5 1328 aa15.78■□□□□ 0.12
SMARCE1-214ENST00000578112 TUBGCP6Q96RT7 1819 aa15.78■□□□□ 0.12
SMARCE1-214ENST00000578112 ZCRB1Q8TBF4 217 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms