RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 NUP188Q5SRE5 1749 aa20.26■□□□□ 0.83
SMARCD2-205ENST00000577686 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
SMARCD2-205ENST00000577686 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
SMARCD2-205ENST00000577686 PLSCR1O15162 318 aa20.24■□□□□ 0.83
SMARCD2-205ENST00000577686 NEUROD1Q13562 356 aa20.24■□□□□ 0.83
SMARCD2-205ENST00000577686 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
SMARCD2-205ENST00000577686 KTN1Q86UP2 1357 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-205ENST00000577686 ABCC6O95255 1503 aa20.23■□□□□ 0.83
SMARCD2-205ENST00000577686 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
SMARCD2-205ENST00000577686 RGPD3A6NKT7 1758 aaPredicted RBP20.23■□□□□ 0.83
SMARCD2-205ENST00000577686 RGPD4Q7Z3J3 1758 aa20.23■□□□□ 0.83
SMARCD2-205ENST00000577686 CCDC7Q96M83 1385 aa20.22■□□□□ 0.83
SMARCD2-205ENST00000577686 CARD10Q9BWT7 1032 aa20.22■□□□□ 0.83
SMARCD2-205ENST00000577686 BCL9O00512 1426 aa20.21■□□□□ 0.83
SMARCD2-205ENST00000577686 SOX12O15370 315 aa20.21■□□□□ 0.83
SMARCD2-205ENST00000577686 KCNQ2O43526 872 aa20.21■□□□□ 0.83
SMARCD2-205ENST00000577686 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
SMARCD2-205ENST00000577686 SIN3AQ96ST3 1273 aa20.2■□□□□ 0.82
SMARCD2-205ENST00000577686 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
SMARCD2-205ENST00000577686 AKAP12Q02952 1782 aa20.19■□□□□ 0.82
SMARCD2-205ENST00000577686 EXOC5O00471 708 aa20.19■□□□□ 0.82
SMARCD2-205ENST00000577686 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
SMARCD2-205ENST00000577686 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
SMARCD2-205ENST00000577686 AXIN2Q9Y2T1 843 aa20.18■□□□□ 0.82
SMARCD2-205ENST00000577686 COL18A1P39060 1754 aa20.18■□□□□ 0.82
SMARCD2-205ENST00000577686 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
SMARCD2-205ENST00000577686 MARCH10Q8NA82 808 aaPredicted RBP20.16■□□□□ 0.82
SMARCD2-205ENST00000577686 CARD11Q9BXL7 1154 aa20.16■□□□□ 0.82
SMARCD2-205ENST00000577686 NFAT5O94916 1531 aa20.15■□□□□ 0.82
SMARCD2-205ENST00000577686 TNS2Q63HR2 1409 aa20.14■□□□□ 0.81
SMARCD2-205ENST00000577686 USP31Q70CQ4 1352 aa20.14■□□□□ 0.81
SMARCD2-205ENST00000577686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.14■□□□□ 0.81
SMARCD2-205ENST00000577686 STK32BQ9NY57 414 aa20.14■□□□□ 0.81
SMARCD2-205ENST00000577686 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
SMARCD2-205ENST00000577686 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
SMARCD2-205ENST00000577686 MON2Q7Z3U7 1717 aa20.12■□□□□ 0.81
SMARCD2-205ENST00000577686 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
SMARCD2-205ENST00000577686 TONSLQ96HA7 1378 aa20.11■□□□□ 0.81
SMARCD2-205ENST00000577686 SLC24A1O60721 1099 aa20.11■□□□□ 0.81
SMARCD2-205ENST00000577686 YY1P25490 414 aa20.11■□□□□ 0.81
SMARCD2-205ENST00000577686 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
SMARCD2-205ENST00000577686 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
SMARCD2-205ENST00000577686 ERBB3P21860 1342 aa20.09■□□□□ 0.81
SMARCD2-205ENST00000577686 IL2RBP14784 551 aa20.09■□□□□ 0.81
SMARCD2-205ENST00000577686 TXNRD1Q16881 649 aa20.09■□□□□ 0.81
SMARCD2-205ENST00000577686 PUS7Q96PZ0 661 aaKnown RBP20.09■□□□□ 0.81
SMARCD2-205ENST00000577686 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
SMARCD2-205ENST00000577686 USP54Q70EL1 1684 aa20.09■□□□□ 0.81
SMARCD2-205ENST00000577686 NME9Q86XW9 330 aa20.07■□□□□ 0.8
SMARCD2-205ENST00000577686 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
SMARCD2-205ENST00000577686 SLC15A2Q16348 729 aa20.05■□□□□ 0.8
SMARCD2-205ENST00000577686 ANKRD24Q8TF21 1146 aa20.05■□□□□ 0.8
SMARCD2-205ENST00000577686 CASZ1Q86V15 1759 aa20.04■□□□□ 0.8
SMARCD2-205ENST00000577686 PTF1AQ7RTS3 328 aa20.04■□□□□ 0.8
SMARCD2-205ENST00000577686 NHSQ6T4R5 1651 aa20.03■□□□□ 0.8
SMARCD2-205ENST00000577686 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
SMARCD2-205ENST00000577686 PROM2Q8N271 834 aa20.03■□□□□ 0.8
SMARCD2-205ENST00000577686 CD163L1Q9NR16 1453 aa20.03■□□□□ 0.8
SMARCD2-205ENST00000577686 MTFR1LQ9H019 292 aa20.02■□□□□ 0.8
SMARCD2-205ENST00000577686 SLC12A5Q9H2X9 1139 aa20.02■□□□□ 0.8
SMARCD2-205ENST00000577686 A0A1W2PP64 1363 aa20.01■□□□□ 0.79
SMARCD2-205ENST00000577686 ACSBG1Q96GR2 724 aa20.01■□□□□ 0.79
SMARCD2-205ENST00000577686 COG3Q96JB2 828 aa20■□□□□ 0.79
SMARCD2-205ENST00000577686 LTN1O94822 1766 aa20■□□□□ 0.79
SMARCD2-205ENST00000577686 ATF5Q9Y2D1 282 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-205ENST00000577686 FAM208AQ9UK61 1670 aaKnown RBP19.98■□□□□ 0.79
SMARCD2-205ENST00000577686 IP6K1Q92551 441 aa19.98■□□□□ 0.79
SMARCD2-205ENST00000577686 AMPHP49418 695 aa19.96■□□□□ 0.79
SMARCD2-205ENST00000577686 PTGER2P43116 358 aa19.95■□□□□ 0.78
SMARCD2-205ENST00000577686 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
SMARCD2-205ENST00000577686 MYOM1P52179 1685 aa19.94■□□□□ 0.78
SMARCD2-205ENST00000577686 LTV1Q96GA3 475 aaPredicted RBP19.94■□□□□ 0.78
SMARCD2-205ENST00000577686 PDGFDQ9GZP0 370 aaPredicted RBP19.94■□□□□ 0.78
SMARCD2-205ENST00000577686 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
SMARCD2-205ENST00000577686 RTL1A6NKG5 1358 aa19.93■□□□□ 0.78
SMARCD2-205ENST00000577686 HMGB2P26583 209 aaKnown RBP19.92■□□□□ 0.78
SMARCD2-205ENST00000577686 SLC16A10Q8TF71 515 aa19.92■□□□□ 0.78
SMARCD2-205ENST00000577686 ARXQ96QS3 562 aa19.92■□□□□ 0.78
SMARCD2-205ENST00000577686 FHDC1Q9C0D6 1143 aaPredicted RBP19.92■□□□□ 0.78
SMARCD2-205ENST00000577686 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
SMARCD2-205ENST00000577686 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
SMARCD2-205ENST00000577686 SYT17Q9BSW7 474 aa19.91■□□□□ 0.78
SMARCD2-205ENST00000577686 ANKRD36BQ8N2N9 1353 aa19.91■□□□□ 0.78
SMARCD2-205ENST00000577686 BTAF1O14981 1849 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 POLD1P28340 1107 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 HOXC9P31274 260 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 TMF1P82094 1093 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 CDCA8Q53HL2 280 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 MAP3K19Q56UN5 1328 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 PAPPAQ13219 1627 aa19.9■□□□□ 0.78
SMARCD2-205ENST00000577686 TESK2Q96S53 571 aa19.89■□□□□ 0.77
SMARCD2-205ENST00000577686 MAP3K5Q99683 1374 aa19.89■□□□□ 0.77
SMARCD2-205ENST00000577686 CGNL1Q0VF96 1302 aa19.88■□□□□ 0.77
SMARCD2-205ENST00000577686 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-205ENST00000577686 SGIP1Q9BQI5 828 aa19.87■□□□□ 0.77
SMARCD2-205ENST00000577686 ZNF827Q17R98 1081 aa19.86■□□□□ 0.77
SMARCD2-205ENST00000577686 RAPGEF4Q8WZA2 1011 aa19.85■□□□□ 0.77
SMARCD2-205ENST00000577686 TFCP2L1Q9NZI6 479 aa19.85■□□□□ 0.77
SMARCD2-205ENST00000577686 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms