RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 PRPF31Q8WWY3 499 aaKnown RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 PIP4K2BP78356 416 aa10.42□□□□□ -0.74
CDH8-203ENST00000577390 GIMAP7Q8NHV1 300 aa10.42□□□□□ -0.74
CDH8-203ENST00000577390 RASSF4Q9H2L5 321 aa10.42□□□□□ -0.74
CDH8-203ENST00000577390 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
CDH8-203ENST00000577390 MBD3O95983 291 aa10.41□□□□□ -0.74
CDH8-203ENST00000577390 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
CDH8-203ENST00000577390 ATP2B1P20020 1258 aa10.41□□□□□ -0.74
CDH8-203ENST00000577390 TCHHQ07283 1943 aa10.41□□□□□ -0.74
CDH8-203ENST00000577390 RNF20Q5VTR2 975 aa10.41□□□□□ -0.74
CDH8-203ENST00000577390 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
CDH8-203ENST00000577390 RNF187Q5TA31 235 aaPredicted RBP10.41□□□□□ -0.74
CDH8-203ENST00000577390 NUCB2P80303 420 aa10.4□□□□□ -0.74
CDH8-203ENST00000577390 C22orf23Q9BZE7 217 aa10.4□□□□□ -0.74
CDH8-203ENST00000577390 EP400NLQ6ZTU2 488 aa10.4□□□□□ -0.74
CDH8-203ENST00000577390 CPLX3Q8WVH0 158 aa10.4□□□□□ -0.74
CDH8-203ENST00000577390 RUFY2Q8WXA3 655 aa10.4□□□□□ -0.74
CDH8-203ENST00000577390 ANKRD18BA2A2Z9 1011 aa10.4□□□□□ -0.75
CDH8-203ENST00000577390 SMARCE1Q969G3 411 aa10.4□□□□□ -0.75
CDH8-203ENST00000577390 SECISBP2LQ93073 1101 aaKnown RBP10.4□□□□□ -0.75
CDH8-203ENST00000577390 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 ATF3P18847 181 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 OGFRQ9NZT2 677 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 KIAA0754O94854 1291 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 CCDC89Q8N998 374 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 TSPY26PQ9H489 355 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 MYBBP1AQ9BQG0 1328 aaKnown RBP10.39□□□□□ -0.75
CDH8-203ENST00000577390 CCDC150Q8NCX0 1101 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 CCDC88BA6NC98 1476 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 CCDC18Q5T9S5 1454 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 LUC7LQ9NQ29 371 aaKnown RBP10.39□□□□□ -0.75
CDH8-203ENST00000577390 SOGA1O94964 1423 aa10.39□□□□□ -0.75
CDH8-203ENST00000577390 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
CDH8-203ENST00000577390 FAM107BQ9H098 131 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 UBE4AQ14139 1066 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 TMCO5BA8MYB1 307 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 GOLIM4O00461 696 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 NOC2LQ9Y3T9 749 aaKnown RBP10.38□□□□□ -0.75
CDH8-203ENST00000577390 RBM25P49756 843 aaKnown RBP10.38□□□□□ -0.75
CDH8-203ENST00000577390 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 TNNT1P13805 278 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 DDX58O95786 925 aaKnown RBP10.38□□□□□ -0.75
CDH8-203ENST00000577390 ZNF526Q8TF50 670 aaPredicted RBP10.38□□□□□ -0.75
CDH8-203ENST00000577390 DDX11Q96FC9 970 aa10.38□□□□□ -0.75
CDH8-203ENST00000577390 NAT10Q9H0A0 1025 aaKnown RBP10.38□□□□□ -0.75
CDH8-203ENST00000577390 TRIM22Q8IYM9 498 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 SSBP05455 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDH8-203ENST00000577390 BIN2Q9UBW5 565 aaPredicted RBP10.37□□□□□ -0.75
CDH8-203ENST00000577390 VPS37CA5D8V6 355 aaPredicted RBP10.37□□□□□ -0.75
CDH8-203ENST00000577390 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 G3BP1Q13283 466 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDH8-203ENST00000577390 RABEP1Q15276 862 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 NOL7Q9UMY1 257 aaKnown RBP10.37□□□□□ -0.75
CDH8-203ENST00000577390 ERICH3Q5RHP9 1530 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 CCDC113Q9H0I3 377 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 KIF6Q6ZMV9 814 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 FERMT2Q96AC1 680 aa10.37□□□□□ -0.75
CDH8-203ENST00000577390 MACROD2A1Z1Q3 448 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 TAF12Q16514 161 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 APBB1IPQ7Z5R6 666 aaPredicted RBP10.36□□□□□ -0.75
CDH8-203ENST00000577390 TTC36A6NLP5 189 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
CDH8-203ENST00000577390 FILIP1LQ4L180 1135 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 CFAP45Q9UL16 551 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 OTUD6BQ8N6M0 293 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 CCDC73Q6ZRK6 1079 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 PIBF1Q8WXW3 757 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 BCL2L13Q9BXK5 485 aa10.36□□□□□ -0.75
CDH8-203ENST00000577390 AIMP1Q12904 312 aaKnown RBP10.35□□□□□ -0.75
CDH8-203ENST00000577390 ODF2LQ9ULJ1 636 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
CDH8-203ENST00000577390 TNIP1Q15025 636 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
CDH8-203ENST00000577390 CTNNA2P26232 953 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 LIG1P18858 919 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 CETN2P41208 172 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 MYRIPQ8NFW9 859 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 ZKSCAN5Q9Y2L8 839 aa10.35□□□□□ -0.75
CDH8-203ENST00000577390 SARNPP82979 210 aaKnown RBP10.34□□□□□ -0.75
CDH8-203ENST00000577390 HOOK3Q86VS8 718 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 CTNNBL1Q8WYA6 563 aaPredicted RBP10.34□□□□□ -0.75
CDH8-203ENST00000577390 TRIM5Q9C035 493 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 SATB1Q01826 763 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 TSNARE1Q96NA8 513 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
CDH8-203ENST00000577390 ATP6V1E1P36543 226 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 USP5P45974 858 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 FLIIQ13045 1269 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 RSPH14Q9UHP6 348 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 LRRFIP2Q9Y608 721 aaKnown RBP10.34□□□□□ -0.75
CDH8-203ENST00000577390 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 TMOD2Q9NZR1 351 aa10.34□□□□□ -0.75
CDH8-203ENST00000577390 ANKRD45Q5TZF3 282 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms