RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 TERF2IPQ9NYB0 399 aa21.08■□□□□ 0.97
MKS1-205ENST00000577315 CD163L1Q9NR16 1453 aa21.07■□□□□ 0.96
MKS1-205ENST00000577315 WDR17Q8IZU2 1322 aa21.07■□□□□ 0.96
MKS1-205ENST00000577315 TRIM37O94972 964 aa21.07■□□□□ 0.96
MKS1-205ENST00000577315 NFAT5O94916 1531 aa21.07■□□□□ 0.96
MKS1-205ENST00000577315 NINLQ9Y2I6 1382 aa21.07■□□□□ 0.96
MKS1-205ENST00000577315 CDCA7Q9BWT1 371 aaPredicted RBP21.06■□□□□ 0.96
MKS1-205ENST00000577315 PARD3Q8TEW0 1356 aa21.06■□□□□ 0.96
MKS1-205ENST00000577315 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
MKS1-205ENST00000577315 AXIN2Q9Y2T1 843 aa21.05■□□□□ 0.96
MKS1-205ENST00000577315 LTN1O94822 1766 aa21.05■□□□□ 0.96
MKS1-205ENST00000577315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
MKS1-205ENST00000577315 SLC12A5Q9H2X9 1139 aa21.04■□□□□ 0.96
MKS1-205ENST00000577315 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
MKS1-205ENST00000577315 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
MKS1-205ENST00000577315 ST20-MTHFSA0A0A6YYL1 179 aa21.03■□□□□ 0.96
MKS1-205ENST00000577315 SOX12O15370 315 aa21.03■□□□□ 0.96
MKS1-205ENST00000577315 APBA3O96018 575 aa21.03■□□□□ 0.96
MKS1-205ENST00000577315 DDB1Q16531 1140 aa21.03■□□□□ 0.96
MKS1-205ENST00000577315 CSB-PGBD3P0DP91 1061 aa21.02■□□□□ 0.96
MKS1-205ENST00000577315 TESK2Q96S53 571 aa21.02■□□□□ 0.96
MKS1-205ENST00000577315 CARD10Q9BWT7 1032 aa21.02■□□□□ 0.96
MKS1-205ENST00000577315 OVOS2A0A0G2JMS6 1433 aa21.02■□□□□ 0.96
MKS1-205ENST00000577315 OVOS2A0A0J9YW53 1432 aa21.02■□□□□ 0.96
MKS1-205ENST00000577315 OVOS2Q6IE36 1432 aa21.02■□□□□ 0.96
MKS1-205ENST00000577315 LRP5O75197 1615 aa21.01■□□□□ 0.95
MKS1-205ENST00000577315 EZH2Q15910 746 aaKnown RBP21.01■□□□□ 0.95
MKS1-205ENST00000577315 CAMKK2Q96RR4 588 aa21.01■□□□□ 0.95
MKS1-205ENST00000577315 PEAK1Q9H792 1746 aa21.01■□□□□ 0.95
MKS1-205ENST00000577315 A0A1W2PP64 1363 aa21■□□□□ 0.95
MKS1-205ENST00000577315 CCDC7Q96M83 1385 aa21■□□□□ 0.95
MKS1-205ENST00000577315 RREB1Q92766 1687 aa21■□□□□ 0.95
MKS1-205ENST00000577315 NME9Q86XW9 330 aa21■□□□□ 0.95
MKS1-205ENST00000577315 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
MKS1-205ENST00000577315 CLSPNQ9HAW4 1339 aa20.98■□□□□ 0.95
MKS1-205ENST00000577315 RGPD3A6NKT7 1758 aaPredicted RBP20.97■□□□□ 0.95
MKS1-205ENST00000577315 RGPD4Q7Z3J3 1758 aa20.97■□□□□ 0.95
MKS1-205ENST00000577315 PSDA5PKW4 1024 aaPredicted RBP20.96■□□□□ 0.95
MKS1-205ENST00000577315 TMF1P82094 1093 aa20.96■□□□□ 0.95
MKS1-205ENST00000577315 BCL9O00512 1426 aa20.95■□□□□ 0.95
MKS1-205ENST00000577315 NUP188Q5SRE5 1749 aa20.95■□□□□ 0.94
MKS1-205ENST00000577315 SRCAPQ6ZRS2 3230 aa20.95■□□□□ 0.94
MKS1-205ENST00000577315 USP47Q96K76 1375 aa20.95■□□□□ 0.94
MKS1-205ENST00000577315 EXOC5O00471 708 aa20.94■□□□□ 0.94
MKS1-205ENST00000577315 CDCA8Q53HL2 280 aa20.93■□□□□ 0.94
MKS1-205ENST00000577315 NBPF14Q5TI25 921 aa20.93■□□□□ 0.94
MKS1-205ENST00000577315 ERBB3P21860 1342 aa20.93■□□□□ 0.94
MKS1-205ENST00000577315 KAT6BQ8WYB5 2073 aa20.93■□□□□ 0.94
MKS1-205ENST00000577315 FAM208AQ9UK61 1670 aaKnown RBP20.93■□□□□ 0.94
MKS1-205ENST00000577315 R3HDM1Q15032 1099 aaKnown RBP20.92■□□□□ 0.94
MKS1-205ENST00000577315 ANKRD36BQ8N2N9 1353 aa20.92■□□□□ 0.94
MKS1-205ENST00000577315 PLSCR1O15162 318 aa20.91■□□□□ 0.94
MKS1-205ENST00000577315 COG3Q96JB2 828 aa20.91■□□□□ 0.94
MKS1-205ENST00000577315 BCL11BQ9C0K0 894 aaPredicted RBP20.91■□□□□ 0.94
MKS1-205ENST00000577315 MARCH10Q8NA82 808 aaPredicted RBP20.9■□□□□ 0.94
MKS1-205ENST00000577315 NLRP2Q9NX02 1062 aa20.9■□□□□ 0.94
MKS1-205ENST00000577315 TNS2Q63HR2 1409 aa20.89■□□□□ 0.94
MKS1-205ENST00000577315 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
MKS1-205ENST00000577315 IP6K1Q92551 441 aa20.88■□□□□ 0.93
MKS1-205ENST00000577315 IL2RBP14784 551 aa20.87■□□□□ 0.93
MKS1-205ENST00000577315 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
MKS1-205ENST00000577315 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
MKS1-205ENST00000577315 NHSQ6T4R5 1651 aa20.83■□□□□ 0.92
MKS1-205ENST00000577315 AMPHP49418 695 aa20.82■□□□□ 0.92
MKS1-205ENST00000577315 MAP3K19Q56UN5 1328 aa20.81■□□□□ 0.92
MKS1-205ENST00000577315 RTL1A6NKG5 1358 aa20.81■□□□□ 0.92
MKS1-205ENST00000577315 FYB1O15117 783 aa20.8■□□□□ 0.92
MKS1-205ENST00000577315 HOXC9P31274 260 aa20.8■□□□□ 0.92
MKS1-205ENST00000577315 MYOM1P52179 1685 aa20.79■□□□□ 0.92
MKS1-205ENST00000577315 RGPD2P0DJD1 1756 aa20.79■□□□□ 0.92
MKS1-205ENST00000577315 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
MKS1-205ENST00000577315 GGNBP2Q9H3C7 697 aa20.78■□□□□ 0.92
MKS1-205ENST00000577315 PTF1AQ7RTS3 328 aa20.77■□□□□ 0.92
MKS1-205ENST00000577315 BTAF1O14981 1849 aa20.76■□□□□ 0.91
MKS1-205ENST00000577315 KIF24Q5T7B8 1368 aa20.75■□□□□ 0.91
MKS1-205ENST00000577315 TXNRD1Q16881 649 aa20.75■□□□□ 0.91
MKS1-205ENST00000577315 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
MKS1-205ENST00000577315 PROM2Q8N271 834 aa20.74■□□□□ 0.91
MKS1-205ENST00000577315 SPON1Q9HCB6 807 aa20.74■□□□□ 0.91
MKS1-205ENST00000577315 ACSBG1Q96GR2 724 aa20.73■□□□□ 0.91
MKS1-205ENST00000577315 KCNQ2O43526 872 aa20.72■□□□□ 0.91
MKS1-205ENST00000577315 FBLN1P23142 703 aa20.72■□□□□ 0.91
MKS1-205ENST00000577315 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
MKS1-205ENST00000577315 STK32BQ9NY57 414 aa20.72■□□□□ 0.91
MKS1-205ENST00000577315 CASZ1Q86V15 1759 aa20.72■□□□□ 0.91
MKS1-205ENST00000577315 CGNL1Q0VF96 1302 aa20.71■□□□□ 0.91
MKS1-205ENST00000577315 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
MKS1-205ENST00000577315 FLT4P35916 1363 aa20.71■□□□□ 0.91
MKS1-205ENST00000577315 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
MKS1-205ENST00000577315 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
MKS1-205ENST00000577315 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
MKS1-205ENST00000577315 INSRP06213 1382 aa20.7■□□□□ 0.9
MKS1-205ENST00000577315 SHANK3Q9BYB0 1731 aa20.7■□□□□ 0.9
MKS1-205ENST00000577315 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
MKS1-205ENST00000577315 DDX54Q8TDD1 881 aaKnown RBP20.69■□□□□ 0.9
MKS1-205ENST00000577315 ZCRB1Q8TBF4 217 aaKnown RBP20.68■□□□□ 0.9
MKS1-205ENST00000577315 CARD14Q9BXL6 1004 aa20.68■□□□□ 0.9
MKS1-205ENST00000577315 SLC15A2Q16348 729 aa20.67■□□□□ 0.9
MKS1-205ENST00000577315 PPP1R1BQ9UD71 204 aaPredicted RBP20.67■□□□□ 0.9
MKS1-205ENST00000577315 NBPF6Q5VWK0 638 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms