RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 KCNH5Q8NCM2 988 aa19.28■□□□□ 0.68
COPS3-214ENST00000577246 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
COPS3-214ENST00000577246 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
COPS3-214ENST00000577246 CPSF1Q10570 1443 aaKnown RBP19.26■□□□□ 0.67
COPS3-214ENST00000577246 CSB-PGBD3P0DP91 1061 aa19.26■□□□□ 0.67
COPS3-214ENST00000577246 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
COPS3-214ENST00000577246 STK32BQ9NY57 414 aa19.26■□□□□ 0.67
COPS3-214ENST00000577246 MARCH10Q8NA82 808 aaPredicted RBP19.25■□□□□ 0.67
COPS3-214ENST00000577246 CARD10Q9BWT7 1032 aa19.25■□□□□ 0.67
COPS3-214ENST00000577246 QRICH2Q9H0J4 1663 aa19.24■□□□□ 0.67
COPS3-214ENST00000577246 EXOC5O00471 708 aa19.23■□□□□ 0.67
COPS3-214ENST00000577246 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
COPS3-214ENST00000577246 ARHGEF25Q86VW2 580 aa19.23■□□□□ 0.67
COPS3-214ENST00000577246 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
COPS3-214ENST00000577246 CASZ1Q86V15 1759 aa19.23■□□□□ 0.67
COPS3-214ENST00000577246 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
COPS3-214ENST00000577246 TTC21AQ8NDW8 1320 aa19.22■□□□□ 0.67
COPS3-214ENST00000577246 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
COPS3-214ENST00000577246 TXNRD1Q16881 649 aa19.21■□□□□ 0.67
COPS3-214ENST00000577246 PROM2Q8N271 834 aa19.21■□□□□ 0.67
COPS3-214ENST00000577246 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
COPS3-214ENST00000577246 SBF2Q86WG5 1849 aa19.21■□□□□ 0.67
COPS3-214ENST00000577246 PTGER2P43116 358 aa19.2■□□□□ 0.66
COPS3-214ENST00000577246 SLC15A2Q16348 729 aa19.2■□□□□ 0.66
COPS3-214ENST00000577246 PTF1AQ7RTS3 328 aa19.2■□□□□ 0.66
COPS3-214ENST00000577246 COL18A1P39060 1754 aa19.19■□□□□ 0.66
COPS3-214ENST00000577246 MTFR1LQ9H019 292 aa19.19■□□□□ 0.66
COPS3-214ENST00000577246 ABCC6O95255 1503 aa19.19■□□□□ 0.66
COPS3-214ENST00000577246 WNK3Q9BYP7 1800 aa19.18■□□□□ 0.66
COPS3-214ENST00000577246 PDGFDQ9GZP0 370 aaPredicted RBP19.18■□□□□ 0.66
COPS3-214ENST00000577246 ATF5Q9Y2D1 282 aaPredicted RBP19.18■□□□□ 0.66
COPS3-214ENST00000577246 AKAP12Q02952 1782 aa19.18■□□□□ 0.66
COPS3-214ENST00000577246 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
COPS3-214ENST00000577246 SOX12O15370 315 aa19.17■□□□□ 0.66
COPS3-214ENST00000577246 TRPM1Q7Z4N2 1603 aa19.17■□□□□ 0.66
COPS3-214ENST00000577246 FHDC1Q9C0D6 1143 aaPredicted RBP19.16■□□□□ 0.66
COPS3-214ENST00000577246 MYOM1P52179 1685 aa19.15■□□□□ 0.66
COPS3-214ENST00000577246 ZNF784Q8NCA9 323 aaPredicted RBP19.15■□□□□ 0.66
COPS3-214ENST00000577246 SYT17Q9BSW7 474 aa19.15■□□□□ 0.66
COPS3-214ENST00000577246 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.65
COPS3-214ENST00000577246 NFAT5O94916 1531 aa19.13■□□□□ 0.65
COPS3-214ENST00000577246 ROCK2O75116 1388 aaKnown RBP19.12■□□□□ 0.65
COPS3-214ENST00000577246 L3MBTL2Q969R5 705 aa19.11■□□□□ 0.65
COPS3-214ENST00000577246 ARXQ96QS3 562 aa19.11■□□□□ 0.65
COPS3-214ENST00000577246 MAP3K5Q99683 1374 aa19.1■□□□□ 0.65
COPS3-214ENST00000577246 ERBB3P21860 1342 aa19.1■□□□□ 0.65
COPS3-214ENST00000577246 SGIP1Q9BQI5 828 aa19.1■□□□□ 0.65
COPS3-214ENST00000577246 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
COPS3-214ENST00000577246 NHSQ6T4R5 1651 aa19.1■□□□□ 0.65
COPS3-214ENST00000577246 IL2RBP14784 551 aa19.09■□□□□ 0.65
COPS3-214ENST00000577246 ACSBG1Q96GR2 724 aa19.09■□□□□ 0.65
COPS3-214ENST00000577246 USP31Q70CQ4 1352 aa19.07■□□□□ 0.64
COPS3-214ENST00000577246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.06■□□□□ 0.64
COPS3-214ENST00000577246 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
COPS3-214ENST00000577246 RGPD5Q99666 1765 aa19.05■□□□□ 0.64
COPS3-214ENST00000577246 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
COPS3-214ENST00000577246 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
COPS3-214ENST00000577246 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
COPS3-214ENST00000577246 UTRNP46939 3433 aa19.03■□□□□ 0.64
COPS3-214ENST00000577246 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
COPS3-214ENST00000577246 POLD1P28340 1107 aa19.03■□□□□ 0.64
COPS3-214ENST00000577246 GPR162Q16538 588 aa19.03■□□□□ 0.64
COPS3-214ENST00000577246 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
COPS3-214ENST00000577246 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
COPS3-214ENST00000577246 C1QTNF8P60827 252 aa19.02■□□□□ 0.64
COPS3-214ENST00000577246 MON2Q7Z3U7 1717 aa19.01■□□□□ 0.63
COPS3-214ENST00000577246 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
COPS3-214ENST00000577246 NME9Q86XW9 330 aa19■□□□□ 0.63
COPS3-214ENST00000577246 USP54Q70EL1 1684 aa19■□□□□ 0.63
COPS3-214ENST00000577246 TMC1Q8TDI8 760 aa18.99■□□□□ 0.63
COPS3-214ENST00000577246 LRRC4BQ9NT99 713 aa18.99■□□□□ 0.63
COPS3-214ENST00000577246 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
COPS3-214ENST00000577246 EDC4Q6P2E9 1401 aaKnown RBP18.99■□□□□ 0.63
COPS3-214ENST00000577246 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
COPS3-214ENST00000577246 BTAF1O14981 1849 aa18.97■□□□□ 0.63
COPS3-214ENST00000577246 KLHL34Q8N239 644 aa18.97■□□□□ 0.63
COPS3-214ENST00000577246 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
COPS3-214ENST00000577246 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
COPS3-214ENST00000577246 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
COPS3-214ENST00000577246 CD163L1Q9NR16 1453 aa18.96■□□□□ 0.63
COPS3-214ENST00000577246 CHD4Q14839 1912 aa18.96■□□□□ 0.63
COPS3-214ENST00000577246 GIGYF1O75420 1035 aaPredicted RBP18.95■□□□□ 0.62
COPS3-214ENST00000577246 IP6K1Q92551 441 aa18.95■□□□□ 0.62
COPS3-214ENST00000577246 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
COPS3-214ENST00000577246 LTN1O94822 1766 aa18.94■□□□□ 0.62
COPS3-214ENST00000577246 PELP1Q8IZL8 1130 aaKnown RBP18.94■□□□□ 0.62
COPS3-214ENST00000577246 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
COPS3-214ENST00000577246 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
COPS3-214ENST00000577246 PUS7Q96PZ0 661 aaKnown RBP18.93■□□□□ 0.62
COPS3-214ENST00000577246 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
COPS3-214ENST00000577246 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
COPS3-214ENST00000577246 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
COPS3-214ENST00000577246 SLC12A5Q9H2X9 1139 aa18.92■□□□□ 0.62
COPS3-214ENST00000577246 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
COPS3-214ENST00000577246 QSER1Q2KHR3 1735 aa18.91■□□□□ 0.62
COPS3-214ENST00000577246 A0A1W2PP64 1363 aa18.91■□□□□ 0.62
COPS3-214ENST00000577246 GRIN3BO60391 1043 aa18.9■□□□□ 0.62
COPS3-214ENST00000577246 PRIM1P49642 420 aaKnown RBP18.9■□□□□ 0.62
COPS3-214ENST00000577246 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
COPS3-214ENST00000577246 COG3Q96JB2 828 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms