RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.24
TSEN54-204ENST00000577197 CPDO75976 1380 aa16.51■□□□□ 0.23
TSEN54-204ENST00000577197 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
TSEN54-204ENST00000577197 FCHSD2O94868 740 aa16.51■□□□□ 0.23
TSEN54-204ENST00000577197 LTN1O94822 1766 aa16.51■□□□□ 0.23
TSEN54-204ENST00000577197 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
TSEN54-204ENST00000577197 IL13P35225 146 aa16.5■□□□□ 0.23
TSEN54-204ENST00000577197 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
TSEN54-204ENST00000577197 PLEKHG2Q9H7P9 1386 aa16.49■□□□□ 0.23
TSEN54-204ENST00000577197 NUTM2BA6NNL0 878 aaPredicted RBP16.48■□□□□ 0.23
TSEN54-204ENST00000577197 NUTM2EB1AL46 878 aaPredicted RBP16.48■□□□□ 0.23
TSEN54-204ENST00000577197 SOX12O15370 315 aa16.48■□□□□ 0.23
TSEN54-204ENST00000577197 RRS1Q15050 365 aaKnown RBP16.48■□□□□ 0.23
TSEN54-204ENST00000577197 ARHGEF25Q86VW2 580 aa16.48■□□□□ 0.23
TSEN54-204ENST00000577197 NUTM2AQ8IVF1 878 aaPredicted RBP16.48■□□□□ 0.23
TSEN54-204ENST00000577197 U2AF1L5P0DN76 240 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-204ENST00000577197 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
TSEN54-204ENST00000577197 U2AF1Q01081 240 aaKnown RBP eCLIP16.47■□□□□ 0.23
TSEN54-204ENST00000577197 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
TSEN54-204ENST00000577197 ILDR1Q86SU0 546 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-204ENST00000577197 IP6K1Q92551 441 aa16.47■□□□□ 0.23
TSEN54-204ENST00000577197 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
TSEN54-204ENST00000577197 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
TSEN54-204ENST00000577197 KDRP35968 1356 aa16.46■□□□□ 0.23
TSEN54-204ENST00000577197 LRP6O75581 1613 aa16.45■□□□□ 0.22
TSEN54-204ENST00000577197 HOXC9P31274 260 aa16.45■□□□□ 0.22
TSEN54-204ENST00000577197 AMPHP49418 695 aa16.45■□□□□ 0.22
TSEN54-204ENST00000577197 FAM208AQ9UK61 1670 aaKnown RBP16.44■□□□□ 0.22
TSEN54-204ENST00000577197 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
TSEN54-204ENST00000577197 ADAMTS2O95450 1211 aa16.44■□□□□ 0.22
TSEN54-204ENST00000577197 FBLN1P23142 703 aa16.44■□□□□ 0.22
TSEN54-204ENST00000577197 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
TSEN54-204ENST00000577197 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
TSEN54-204ENST00000577197 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
TSEN54-204ENST00000577197 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
TSEN54-204ENST00000577197 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
TSEN54-204ENST00000577197 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
TSEN54-204ENST00000577197 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
TSEN54-204ENST00000577197 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
TSEN54-204ENST00000577197 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
TSEN54-204ENST00000577197 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
TSEN54-204ENST00000577197 FAM83GA6ND36 823 aa16.42■□□□□ 0.22
TSEN54-204ENST00000577197 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
TSEN54-204ENST00000577197 NEFMP07197 916 aa16.42■□□□□ 0.22
TSEN54-204ENST00000577197 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
TSEN54-204ENST00000577197 COL18A1P39060 1754 aa16.41■□□□□ 0.22
TSEN54-204ENST00000577197 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
TSEN54-204ENST00000577197 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
TSEN54-204ENST00000577197 LMO7Q8WWI1 1683 aa16.4■□□□□ 0.22
TSEN54-204ENST00000577197 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
TSEN54-204ENST00000577197 APAF1O14727 1248 aa16.39■□□□□ 0.21
TSEN54-204ENST00000577197 TCP11L2Q8N4U5 519 aa16.39■□□□□ 0.21
TSEN54-204ENST00000577197 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
TSEN54-204ENST00000577197 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
TSEN54-204ENST00000577197 SLIT2O94813 1529 aa16.39■□□□□ 0.21
TSEN54-204ENST00000577197 FNBP4Q8N3X1 1017 aaPredicted RBP16.38■□□□□ 0.21
TSEN54-204ENST00000577197 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
TSEN54-204ENST00000577197 BTG4Q9NY30 223 aa16.37■□□□□ 0.21
TSEN54-204ENST00000577197 AXIN2Q9Y2T1 843 aa16.37■□□□□ 0.21
TSEN54-204ENST00000577197 PLCH1Q4KWH8 1693 aa16.37■□□□□ 0.21
TSEN54-204ENST00000577197 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
TSEN54-204ENST00000577197 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
TSEN54-204ENST00000577197 ERBB3P21860 1342 aa16.36■□□□□ 0.21
TSEN54-204ENST00000577197 IL16Q14005 1332 aa16.36■□□□□ 0.21
TSEN54-204ENST00000577197 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
TSEN54-204ENST00000577197 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
TSEN54-204ENST00000577197 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
TSEN54-204ENST00000577197 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
TSEN54-204ENST00000577197 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
TSEN54-204ENST00000577197 EYA1Q99502 592 aa16.35■□□□□ 0.21
TSEN54-204ENST00000577197 EVA1CP58658 441 aa16.34■□□□□ 0.21
TSEN54-204ENST00000577197 NFE2L2Q16236 605 aa16.34■□□□□ 0.21
TSEN54-204ENST00000577197 UNC5CLQ8IV45 518 aa16.34■□□□□ 0.21
TSEN54-204ENST00000577197 WWC1Q8IX03 1113 aa16.34■□□□□ 0.21
TSEN54-204ENST00000577197 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
TSEN54-204ENST00000577197 E9PSI1 815 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
TSEN54-204ENST00000577197 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 TRMT2AQ8IZ69 625 aaKnown RBP16.33■□□□□ 0.2
TSEN54-204ENST00000577197 USP21Q9UK80 565 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 AFF2P51816 1311 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 BCL9LQ86UU0 1499 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
TSEN54-204ENST00000577197 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
TSEN54-204ENST00000577197 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.32■□□□□ 0.2
TSEN54-204ENST00000577197 LTV1Q96GA3 475 aaPredicted RBP16.31■□□□□ 0.2
TSEN54-204ENST00000577197 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
TSEN54-204ENST00000577197 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
TSEN54-204ENST00000577197 CRB1P82279 1406 aa16.3■□□□□ 0.2
TSEN54-204ENST00000577197 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
TSEN54-204ENST00000577197 HMOX1P09601 288 aa16.3■□□□□ 0.2
TSEN54-204ENST00000577197 ZNF772Q68DY9 489 aaPredicted RBP16.3■□□□□ 0.2
TSEN54-204ENST00000577197 GAS2L2Q8NHY3 880 aa16.3■□□□□ 0.2
TSEN54-204ENST00000577197 SLFN5Q08AF3 891 aa16.29■□□□□ 0.2
TSEN54-204ENST00000577197 VPS72Q15906 364 aa16.29■□□□□ 0.2
TSEN54-204ENST00000577197 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
TSEN54-204ENST00000577197 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
TSEN54-204ENST00000577197 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
TSEN54-204ENST00000577197 CARD10Q9BWT7 1032 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms