RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 CSB-PGBD3P0DP91 1061 aa21.7■■□□□ 1.06
SF3B3-215ENST00000577085 CDCA8Q53HL2 280 aa21.7■■□□□ 1.06
SF3B3-215ENST00000577085 FAM182BQ5T319 152 aa21.7■■□□□ 1.06
SF3B3-215ENST00000577085 ARHGEF25Q86VW2 580 aa21.7■■□□□ 1.06
SF3B3-215ENST00000577085 BAG6P46379 1132 aa21.68■■□□□ 1.06
SF3B3-215ENST00000577085 DEFB132Q7Z7B7 95 aa21.68■■□□□ 1.06
SF3B3-215ENST00000577085 USP31Q70CQ4 1352 aa21.68■■□□□ 1.06
SF3B3-215ENST00000577085 FAM196AQ6ZSG2 479 aa21.67■■□□□ 1.06
SF3B3-215ENST00000577085 AXIN2Q9Y2T1 843 aa21.66■■□□□ 1.06
SF3B3-215ENST00000577085 WDR17Q8IZU2 1322 aa21.65■■□□□ 1.06
SF3B3-215ENST00000577085 NFAT5O94916 1531 aa21.64■■□□□ 1.05
SF3B3-215ENST00000577085 ANKRD36BQ8N2N9 1353 aa21.62■■□□□ 1.05
SF3B3-215ENST00000577085 COG3Q96JB2 828 aa21.62■■□□□ 1.05
SF3B3-215ENST00000577085 COL18A1P39060 1754 aa21.61■■□□□ 1.05
SF3B3-215ENST00000577085 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
SF3B3-215ENST00000577085 TRIM37O94972 964 aa21.6■■□□□ 1.05
SF3B3-215ENST00000577085 DDB1Q16531 1140 aa21.6■■□□□ 1.05
SF3B3-215ENST00000577085 CDCA7Q9BWT1 371 aaPredicted RBP21.6■■□□□ 1.05
SF3B3-215ENST00000577085 ABCC6O95255 1503 aa21.6■■□□□ 1.05
SF3B3-215ENST00000577085 USP54Q70EL1 1684 aa21.6■■□□□ 1.05
SF3B3-215ENST00000577085 CARD10Q9BWT7 1032 aa21.59■■□□□ 1.05
SF3B3-215ENST00000577085 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
SF3B3-215ENST00000577085 OVOS2A0A0J9YW53 1432 aa21.57■■□□□ 1.04
SF3B3-215ENST00000577085 OVOS2Q6IE36 1432 aa21.57■■□□□ 1.04
SF3B3-215ENST00000577085 EN1Q05925 392 aaPredicted RBP21.57■■□□□ 1.04
SF3B3-215ENST00000577085 PARP4Q9UKK3 1724 aaKnown RBP21.57■■□□□ 1.04
SF3B3-215ENST00000577085 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
SF3B3-215ENST00000577085 NLRP2Q9NX02 1062 aa21.56■■□□□ 1.04
SF3B3-215ENST00000577085 CCDC7Q96M83 1385 aa21.56■■□□□ 1.04
SF3B3-215ENST00000577085 APBA3O96018 575 aa21.55■■□□□ 1.04
SF3B3-215ENST00000577085 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
SF3B3-215ENST00000577085 LTN1O94822 1766 aa21.55■■□□□ 1.04
SF3B3-215ENST00000577085 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
SF3B3-215ENST00000577085 ANKRD24Q8TF21 1146 aa21.54■■□□□ 1.04
SF3B3-215ENST00000577085 OVOS2A0A0G2JMS6 1433 aa21.54■■□□□ 1.04
SF3B3-215ENST00000577085 ERBB3P21860 1342 aa21.54■■□□□ 1.04
SF3B3-215ENST00000577085 EXOC5O00471 708 aa21.52■■□□□ 1.04
SF3B3-215ENST00000577085 AMPHP49418 695 aa21.52■■□□□ 1.04
SF3B3-215ENST00000577085 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
SF3B3-215ENST00000577085 IP6K1Q92551 441 aa21.51■■□□□ 1.03
SF3B3-215ENST00000577085 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
SF3B3-215ENST00000577085 DISP2A7MBM2 1401 aa21.51■■□□□ 1.03
SF3B3-215ENST00000577085 TNS1Q9HBL0 1735 aaKnown RBP21.51■■□□□ 1.03
SF3B3-215ENST00000577085 LTV1Q96GA3 475 aaPredicted RBP21.5■■□□□ 1.03
SF3B3-215ENST00000577085 FYB1O15117 783 aa21.49■■□□□ 1.03
SF3B3-215ENST00000577085 EZH2Q15910 746 aaKnown RBP21.49■■□□□ 1.03
SF3B3-215ENST00000577085 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
SF3B3-215ENST00000577085 MAP3K19Q56UN5 1328 aa21.48■■□□□ 1.03
SF3B3-215ENST00000577085 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
SF3B3-215ENST00000577085 IL2RBP14784 551 aa21.47■■□□□ 1.03
SF3B3-215ENST00000577085 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
SF3B3-215ENST00000577085 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
SF3B3-215ENST00000577085 PSDA5PKW4 1024 aaPredicted RBP21.45■■□□□ 1.02
SF3B3-215ENST00000577085 FBLN1P23142 703 aa21.45■■□□□ 1.02
SF3B3-215ENST00000577085 HOXC9P31274 260 aa21.45■■□□□ 1.02
SF3B3-215ENST00000577085 MARCH10Q8NA82 808 aaPredicted RBP21.45■■□□□ 1.02
SF3B3-215ENST00000577085 CAMKK2Q96RR4 588 aa21.45■■□□□ 1.02
SF3B3-215ENST00000577085 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
SF3B3-215ENST00000577085 TNS2Q63HR2 1409 aa21.44■■□□□ 1.02
SF3B3-215ENST00000577085 RTL1A6NKG5 1358 aa21.43■■□□□ 1.02
SF3B3-215ENST00000577085 MYOM1P52179 1685 aa21.43■■□□□ 1.02
SF3B3-215ENST00000577085 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
SF3B3-215ENST00000577085 CGNL1Q0VF96 1302 aa21.42■■□□□ 1.02
SF3B3-215ENST00000577085 SMG6Q86US8 1419 aaKnown RBP21.42■■□□□ 1.02
SF3B3-215ENST00000577085 CARD14Q9BXL6 1004 aa21.42■■□□□ 1.02
SF3B3-215ENST00000577085 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
SF3B3-215ENST00000577085 PEAK1Q9H792 1746 aa21.41■■□□□ 1.02
SF3B3-215ENST00000577085 R3HDM1Q15032 1099 aaKnown RBP21.41■■□□□ 1.02
SF3B3-215ENST00000577085 NBPF14Q5TI25 921 aa21.41■■□□□ 1.02
SF3B3-215ENST00000577085 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
SF3B3-215ENST00000577085 BCL9O00512 1426 aa21.38■■□□□ 1.01
SF3B3-215ENST00000577085 PPM1GO15355 546 aaPredicted RBP21.37■■□□□ 1.01
SF3B3-215ENST00000577085 PLSCR1O15162 318 aa21.36■■□□□ 1.01
SF3B3-215ENST00000577085 FLT4P35916 1363 aa21.36■■□□□ 1.01
SF3B3-215ENST00000577085 SRCAPQ6ZRS2 3230 aa21.35■■□□□ 1.01
SF3B3-215ENST00000577085 SBF2Q86WG5 1849 aa21.35■■□□□ 1.01
SF3B3-215ENST00000577085 DDX54Q8TDD1 881 aaKnown RBP21.35■■□□□ 1.01
SF3B3-215ENST00000577085 KIF24Q5T7B8 1368 aa21.35■■□□□ 1.01
SF3B3-215ENST00000577085 ACSBG1Q96GR2 724 aa21.34■■□□□ 1.01
SF3B3-215ENST00000577085 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1.01
SF3B3-215ENST00000577085 PTF1AQ7RTS3 328 aa21.33■■□□□ 1.01
SF3B3-215ENST00000577085 PANK3Q9H999 370 aa21.33■■□□□ 1.01
SF3B3-215ENST00000577085 RREB1Q92766 1687 aa21.33■■□□□ 1
SF3B3-215ENST00000577085 INSRP06213 1382 aa21.33■■□□□ 1
SF3B3-215ENST00000577085 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
SF3B3-215ENST00000577085 NBPF6Q5VWK0 638 aa21.31■■□□□ 1
SF3B3-215ENST00000577085 NBPF4Q96M43 638 aa21.31■■□□□ 1
SF3B3-215ENST00000577085 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
SF3B3-215ENST00000577085 NUP188Q5SRE5 1749 aa21.3■■□□□ 1
SF3B3-215ENST00000577085 KCNQ2O43526 872 aa21.3■■□□□ 1
SF3B3-215ENST00000577085 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
SF3B3-215ENST00000577085 USHBP1Q8N6Y0 703 aa21.3■■□□□ 1
SF3B3-215ENST00000577085 RGPD3A6NKT7 1758 aaPredicted RBP21.3■■□□□ 1
SF3B3-215ENST00000577085 RGPD4Q7Z3J3 1758 aa21.3■■□□□ 1
SF3B3-215ENST00000577085 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
SF3B3-215ENST00000577085 TATP17735 454 aaPredicted RBP21.28■■□□□ 1
SF3B3-215ENST00000577085 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
SF3B3-215ENST00000577085 RGPD2P0DJD1 1756 aa21.27■■□□□ 1
SF3B3-215ENST00000577085 NHSQ6T4R5 1651 aa21.27■■□□□ 1
SF3B3-215ENST00000577085 LRP5O75197 1615 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms