RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
PRPF8-215ENST00000576958 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
PRPF8-215ENST00000576958 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
PRPF8-215ENST00000576958 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
PRPF8-215ENST00000576958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRPF8-215ENST00000576958 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
PRPF8-215ENST00000576958 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
PRPF8-215ENST00000576958 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
PRPF8-215ENST00000576958 OVOS2A0A0J9YW53 1432 aa17.25■□□□□ 0.35
PRPF8-215ENST00000576958 OVOS2Q6IE36 1432 aa17.25■□□□□ 0.35
PRPF8-215ENST00000576958 NME9Q86XW9 330 aa17.25■□□□□ 0.35
PRPF8-215ENST00000576958 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
PRPF8-215ENST00000576958 DDB1Q16531 1140 aa17.24■□□□□ 0.35
PRPF8-215ENST00000576958 PROM2Q8N271 834 aa17.23■□□□□ 0.35
PRPF8-215ENST00000576958 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
PRPF8-215ENST00000576958 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
PRPF8-215ENST00000576958 CSB-PGBD3P0DP91 1061 aa17.21■□□□□ 0.35
PRPF8-215ENST00000576958 SLC12A5Q9H2X9 1139 aa17.21■□□□□ 0.35
PRPF8-215ENST00000576958 LTN1O94822 1766 aa17.2■□□□□ 0.34
PRPF8-215ENST00000576958 KCNQ2O43526 872 aa17.2■□□□□ 0.34
PRPF8-215ENST00000576958 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
PRPF8-215ENST00000576958 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
PRPF8-215ENST00000576958 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
PRPF8-215ENST00000576958 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
PRPF8-215ENST00000576958 CASZ1Q86V15 1759 aa17.19■□□□□ 0.34
PRPF8-215ENST00000576958 RGPD3A6NKT7 1758 aaPredicted RBP17.18■□□□□ 0.34
PRPF8-215ENST00000576958 RGPD4Q7Z3J3 1758 aa17.18■□□□□ 0.34
PRPF8-215ENST00000576958 CARD10Q9BWT7 1032 aa17.18■□□□□ 0.34
PRPF8-215ENST00000576958 USP54Q70EL1 1684 aa17.17■□□□□ 0.34
PRPF8-215ENST00000576958 FBLN1P23142 703 aa17.17■□□□□ 0.34
PRPF8-215ENST00000576958 NBPF14Q5TI25 921 aa17.17■□□□□ 0.34
PRPF8-215ENST00000576958 KCNH5Q8NCM2 988 aa17.17■□□□□ 0.34
PRPF8-215ENST00000576958 ACSBG1Q96GR2 724 aa17.17■□□□□ 0.34
PRPF8-215ENST00000576958 A0A1W2PP64 1363 aa17.16■□□□□ 0.34
PRPF8-215ENST00000576958 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
PRPF8-215ENST00000576958 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
PRPF8-215ENST00000576958 TNS2Q63HR2 1409 aa17.14■□□□□ 0.33
PRPF8-215ENST00000576958 PLSCR1O15162 318 aa17.14■□□□□ 0.33
PRPF8-215ENST00000576958 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
PRPF8-215ENST00000576958 ERBB3P21860 1342 aa17.14■□□□□ 0.33
PRPF8-215ENST00000576958 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
PRPF8-215ENST00000576958 MYOM1P52179 1685 aa17.13■□□□□ 0.33
PRPF8-215ENST00000576958 TXNRD1Q16881 649 aa17.12■□□□□ 0.33
PRPF8-215ENST00000576958 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
PRPF8-215ENST00000576958 NHSQ6T4R5 1651 aa17.12■□□□□ 0.33
PRPF8-215ENST00000576958 BCL9O00512 1426 aa17.12■□□□□ 0.33
PRPF8-215ENST00000576958 EXOC5O00471 708 aa17.11■□□□□ 0.33
PRPF8-215ENST00000576958 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
PRPF8-215ENST00000576958 TESK2Q96S53 571 aa17.11■□□□□ 0.33
PRPF8-215ENST00000576958 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
PRPF8-215ENST00000576958 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
PRPF8-215ENST00000576958 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
PRPF8-215ENST00000576958 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
PRPF8-215ENST00000576958 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
PRPF8-215ENST00000576958 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
PRPF8-215ENST00000576958 ABCC6O95255 1503 aa17.1■□□□□ 0.33
PRPF8-215ENST00000576958 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
PRPF8-215ENST00000576958 CDCA7Q9BWT1 371 aaPredicted RBP17.09■□□□□ 0.33
PRPF8-215ENST00000576958 PPP1R1BQ9UD71 204 aaPredicted RBP17.09■□□□□ 0.33
PRPF8-215ENST00000576958 BTAF1O14981 1849 aa17.09■□□□□ 0.33
PRPF8-215ENST00000576958 PTGER2P43116 358 aa17.08■□□□□ 0.32
PRPF8-215ENST00000576958 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.32
PRPF8-215ENST00000576958 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
PRPF8-215ENST00000576958 UTRNP46939 3433 aa17.07■□□□□ 0.32
PRPF8-215ENST00000576958 IL2RBP14784 551 aa17.06■□□□□ 0.32
PRPF8-215ENST00000576958 KCNQ4P56696 695 aa17.06■□□□□ 0.32
PRPF8-215ENST00000576958 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
PRPF8-215ENST00000576958 FAM208AQ9UK61 1670 aaKnown RBP17.05■□□□□ 0.32
PRPF8-215ENST00000576958 C11orf95C9JLR9 678 aaPredicted RBP17.05■□□□□ 0.32
PRPF8-215ENST00000576958 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
PRPF8-215ENST00000576958 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
PRPF8-215ENST00000576958 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
PRPF8-215ENST00000576958 MAP3K19Q56UN5 1328 aa17.04■□□□□ 0.32
PRPF8-215ENST00000576958 KAT6BQ8WYB5 2073 aa17.04■□□□□ 0.32
PRPF8-215ENST00000576958 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
PRPF8-215ENST00000576958 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
PRPF8-215ENST00000576958 YY1P25490 414 aa17.02■□□□□ 0.32
PRPF8-215ENST00000576958 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.32
PRPF8-215ENST00000576958 IP6K1Q92551 441 aa17.02■□□□□ 0.32
PRPF8-215ENST00000576958 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
PRPF8-215ENST00000576958 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.31
PRPF8-215ENST00000576958 MEGF6O75095 1541 aa17.01■□□□□ 0.31
PRPF8-215ENST00000576958 HOXC9P31274 260 aa17.01■□□□□ 0.31
PRPF8-215ENST00000576958 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
PRPF8-215ENST00000576958 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
PRPF8-215ENST00000576958 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
PRPF8-215ENST00000576958 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
PRPF8-215ENST00000576958 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
PRPF8-215ENST00000576958 GGNBP2Q9H3C7 697 aa16.99■□□□□ 0.31
PRPF8-215ENST00000576958 NSD2O96028 1365 aa16.99■□□□□ 0.31
PRPF8-215ENST00000576958 COG3Q96JB2 828 aa16.97■□□□□ 0.31
PRPF8-215ENST00000576958 AMPHP49418 695 aa16.96■□□□□ 0.31
PRPF8-215ENST00000576958 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
PRPF8-215ENST00000576958 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
PRPF8-215ENST00000576958 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
PRPF8-215ENST00000576958 USP47Q96K76 1375 aa16.96■□□□□ 0.31
PRPF8-215ENST00000576958 FYB1O15117 783 aa16.95■□□□□ 0.3
PRPF8-215ENST00000576958 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
PRPF8-215ENST00000576958 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
PRPF8-215ENST00000576958 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms