RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MTFR1LQ9H019 292 aa23.77■■□□□ 1.4
CTDNEP1-211ENST00000575783 CABP2Q9NPB3 220 aa23.77■■□□□ 1.4
CTDNEP1-211ENST00000575783 MYOM1P52179 1685 aa23.76■■□□□ 1.39
CTDNEP1-211ENST00000575783 ARHGEF28Q8N1W1 1705 aaKnown RBP23.76■■□□□ 1.39
CTDNEP1-211ENST00000575783 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
CTDNEP1-211ENST00000575783 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
CTDNEP1-211ENST00000575783 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
CTDNEP1-211ENST00000575783 RAB3GAP2Q9H2M9 1393 aa23.74■■□□□ 1.39
CTDNEP1-211ENST00000575783 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 CSB-PGBD3P0DP91 1061 aa23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 ARXQ96QS3 562 aa23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 WDR17Q8IZU2 1322 aa23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 LRRC37A3O60309 1634 aa23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
CTDNEP1-211ENST00000575783 EXOC5O00471 708 aa23.72■■□□□ 1.39
CTDNEP1-211ENST00000575783 SGIP1Q9BQI5 828 aa23.72■■□□□ 1.39
CTDNEP1-211ENST00000575783 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
CTDNEP1-211ENST00000575783 BCL9O00512 1426 aa23.69■■□□□ 1.38
CTDNEP1-211ENST00000575783 SBF2Q86WG5 1849 aa23.69■■□□□ 1.38
CTDNEP1-211ENST00000575783 SOX12O15370 315 aa23.69■■□□□ 1.38
CTDNEP1-211ENST00000575783 GPR162Q16538 588 aa23.69■■□□□ 1.38
CTDNEP1-211ENST00000575783 IFFO2Q5TF58 517 aa23.69■■□□□ 1.38
CTDNEP1-211ENST00000575783 BRD4O60885 1362 aaPredicted RBP23.68■■□□□ 1.38
CTDNEP1-211ENST00000575783 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
CTDNEP1-211ENST00000575783 CARD10Q9BWT7 1032 aa23.68■■□□□ 1.38
CTDNEP1-211ENST00000575783 ACSBG1Q96GR2 724 aa23.66■■□□□ 1.38
CTDNEP1-211ENST00000575783 CEP350Q5VT06 3117 aa23.66■■□□□ 1.38
CTDNEP1-211ENST00000575783 GOLGB1Q14789 3259 aaKnown RBP23.66■■□□□ 1.38
CTDNEP1-211ENST00000575783 USP6P35125 1406 aa23.66■■□□□ 1.38
CTDNEP1-211ENST00000575783 ARHGEF25Q86VW2 580 aa23.65■■□□□ 1.38
CTDNEP1-211ENST00000575783 CENPJQ9HC77 1338 aaPredicted RBP23.64■■□□□ 1.38
CTDNEP1-211ENST00000575783 GIGYF1O75420 1035 aaPredicted RBP23.64■■□□□ 1.37
CTDNEP1-211ENST00000575783 KLHL34Q8N239 644 aa23.64■■□□□ 1.37
CTDNEP1-211ENST00000575783 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
CTDNEP1-211ENST00000575783 SLIT3O75094 1523 aa23.63■■□□□ 1.37
CTDNEP1-211ENST00000575783 CPSF1Q10570 1443 aaKnown RBP23.61■■□□□ 1.37
CTDNEP1-211ENST00000575783 KCNH5Q8NCM2 988 aa23.61■■□□□ 1.37
CTDNEP1-211ENST00000575783 MAP3K5Q99683 1374 aa23.58■■□□□ 1.37
CTDNEP1-211ENST00000575783 ZNF827Q17R98 1081 aa23.58■■□□□ 1.37
CTDNEP1-211ENST00000575783 COL18A1P39060 1754 aa23.57■■□□□ 1.36
CTDNEP1-211ENST00000575783 TTC21BQ7Z4L5 1316 aa23.57■■□□□ 1.36
CTDNEP1-211ENST00000575783 CCDC7Q96M83 1385 aa23.56■■□□□ 1.36
CTDNEP1-211ENST00000575783 AKAP12Q02952 1782 aa23.55■■□□□ 1.36
CTDNEP1-211ENST00000575783 CHD4Q14839 1912 aa23.55■■□□□ 1.36
CTDNEP1-211ENST00000575783 POLD1P28340 1107 aa23.54■■□□□ 1.36
CTDNEP1-211ENST00000575783 LRRC4BQ9NT99 713 aa23.54■■□□□ 1.36
CTDNEP1-211ENST00000575783 TNS2Q63HR2 1409 aa23.53■■□□□ 1.36
CTDNEP1-211ENST00000575783 ZNF692Q9BU19 519 aaPredicted RBP23.53■■□□□ 1.36
CTDNEP1-211ENST00000575783 NLRP2Q9NX02 1062 aa23.53■■□□□ 1.36
CTDNEP1-211ENST00000575783 PIK3C2AO00443 1686 aa23.51■■□□□ 1.35
CTDNEP1-211ENST00000575783 WNK3Q9BYP7 1800 aa23.51■■□□□ 1.35
CTDNEP1-211ENST00000575783 EVC2Q86UK5 1308 aa23.51■■□□□ 1.35
CTDNEP1-211ENST00000575783 SLC16A10Q8TF71 515 aa23.5■■□□□ 1.35
CTDNEP1-211ENST00000575783 IL2RBP14784 551 aa23.49■■□□□ 1.35
CTDNEP1-211ENST00000575783 NLGN2Q8NFZ4 835 aa23.49■■□□□ 1.35
CTDNEP1-211ENST00000575783 AKT1S1Q96B36 256 aa23.49■■□□□ 1.35
CTDNEP1-211ENST00000575783 TFCP2L1Q9NZI6 479 aa23.47■■□□□ 1.35
CTDNEP1-211ENST00000575783 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
CTDNEP1-211ENST00000575783 KIAA1210Q9ULL0 1709 aa23.47■■□□□ 1.35
CTDNEP1-211ENST00000575783 NHSQ6T4R5 1651 aa23.45■■□□□ 1.34
CTDNEP1-211ENST00000575783 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
CTDNEP1-211ENST00000575783 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
CTDNEP1-211ENST00000575783 PNPLA7Q6ZV29 1317 aa23.44■■□□□ 1.34
CTDNEP1-211ENST00000575783 KCNQ4P56696 695 aa23.44■■□□□ 1.34
CTDNEP1-211ENST00000575783 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
CTDNEP1-211ENST00000575783 ERBB3P21860 1342 aa23.43■■□□□ 1.34
CTDNEP1-211ENST00000575783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.43■■□□□ 1.34
CTDNEP1-211ENST00000575783 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
CTDNEP1-211ENST00000575783 TRPM1Q7Z4N2 1603 aa23.43■■□□□ 1.34
CTDNEP1-211ENST00000575783 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
CTDNEP1-211ENST00000575783 GRIN3BO60391 1043 aa23.42■■□□□ 1.34
CTDNEP1-211ENST00000575783 YBX3P16989 372 aaKnown RBP eCLIP23.42■■□□□ 1.343e-6■■■□□ 15.5
CTDNEP1-211ENST00000575783 NFAT5O94916 1531 aa23.42■■□□□ 1.34
CTDNEP1-211ENST00000575783 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
CTDNEP1-211ENST00000575783 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
CTDNEP1-211ENST00000575783 ABCC6O95255 1503 aa23.41■■□□□ 1.34
CTDNEP1-211ENST00000575783 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
CTDNEP1-211ENST00000575783 MSH5O43196 834 aa23.39■■□□□ 1.33
CTDNEP1-211ENST00000575783 BTAF1O14981 1849 aa23.37■■□□□ 1.33
CTDNEP1-211ENST00000575783 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
CTDNEP1-211ENST00000575783 NME9Q86XW9 330 aa23.36■■□□□ 1.33
CTDNEP1-211ENST00000575783 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
CTDNEP1-211ENST00000575783 GPBP1L1Q9HC44 474 aaPredicted RBP23.34■■□□□ 1.33
CTDNEP1-211ENST00000575783 ATP10DQ9P241 1426 aa23.33■■□□□ 1.33
CTDNEP1-211ENST00000575783 ZNF526Q8TF50 670 aaPredicted RBP23.32■■□□□ 1.32
CTDNEP1-211ENST00000575783 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
CTDNEP1-211ENST00000575783 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
CTDNEP1-211ENST00000575783 USP31Q70CQ4 1352 aa23.31■■□□□ 1.32
CTDNEP1-211ENST00000575783 MSL1Q68DK7 614 aa23.31■■□□□ 1.32
CTDNEP1-211ENST00000575783 COL23A1Q86Y22 540 aaPredicted RBP23.3■■□□□ 1.32
CTDNEP1-211ENST00000575783 L3MBTL2Q969R5 705 aa23.3■■□□□ 1.32
CTDNEP1-211ENST00000575783 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
CTDNEP1-211ENST00000575783 HSPA6P17066 643 aa23.29■■□□□ 1.32
CTDNEP1-211ENST00000575783 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
CTDNEP1-211ENST00000575783 ANKRD36BQ8N2N9 1353 aa23.27■■□□□ 1.31
CTDNEP1-211ENST00000575783 ROCK2O75116 1388 aaKnown RBP23.26■■□□□ 1.31
CTDNEP1-211ENST00000575783 IP6K1Q92551 441 aa23.25■■□□□ 1.31
CTDNEP1-211ENST00000575783 SBNO2Q9Y2G9 1366 aa23.25■■□□□ 1.31
CTDNEP1-211ENST00000575783 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms