RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	EP400	Q96L91	3159 aa		19.88	■□□□□ 0.77
EDC4-210	ENST00000575507	CRB1	P82279	1406 aa		19.88	■□□□□ 0.77
EDC4-210	ENST00000575507	THRAP3	Q9Y2W1	955 aa	Known RBP	19.87	■□□□□ 0.77
EDC4-210	ENST00000575507	WDR17	Q8IZU2	1322 aa		19.86	■□□□□ 0.77
EDC4-210	ENST00000575507	FBLN1	P23142	703 aa		19.86	■□□□□ 0.77
EDC4-210	ENST00000575507	TOM1L2	Q6ZVM7	507 aa		19.86	■□□□□ 0.77
EDC4-210	ENST00000575507	NINL	Q9Y2I6	1382 aa		19.85	■□□□□ 0.77
EDC4-210	ENST00000575507	OVOS2	A0A0J9YW53	1432 aa		19.84	■□□□□ 0.77
EDC4-210	ENST00000575507	OVOS2	Q6IE36	1432 aa		19.84	■□□□□ 0.77
EDC4-210	ENST00000575507	ANKRD36B	Q8N2N9	1353 aa		19.83	■□□□□ 0.77
EDC4-210	ENST00000575507	PDE3B	Q13370	1112 aa		19.83	■□□□□ 0.77
EDC4-210	ENST00000575507	SF3B2	Q13435	895 aa	Known RBP	19.83	■□□□□ 0.77
EDC4-210	ENST00000575507	TRIM37	O94972	964 aa		19.82	■□□□□ 0.76
EDC4-210	ENST00000575507	FAM196A	Q6ZSG2	479 aa		19.82	■□□□□ 0.76
EDC4-210	ENST00000575507	CARD14	Q9BXL6	1004 aa		19.82	■□□□□ 0.76
EDC4-210	ENST00000575507	USP54	Q70EL1	1684 aa		19.81	■□□□□ 0.76
EDC4-210	ENST00000575507	FYB1	O15117	783 aa		19.81	■□□□□ 0.76
EDC4-210	ENST00000575507	EN1	Q05925	392 aa	Predicted RBP	19.81	■□□□□ 0.76
EDC4-210	ENST00000575507	CARD10	Q9BWT7	1032 aa		19.81	■□□□□ 0.76
EDC4-210	ENST00000575507	CSB-PGBD3	P0DP91	1061 aa		19.8	■□□□□ 0.76
EDC4-210	ENST00000575507	GGNBP2	Q9H3C7	697 aa		19.79	■□□□□ 0.76
EDC4-210	ENST00000575507	RGPD5	Q99666	1765 aa		19.79	■□□□□ 0.76
EDC4-210	ENST00000575507	HSPA5	P11021	654 aa	Known RBP	19.78	■□□□□ 0.76
EDC4-210	ENST00000575507	BAG6	P46379	1132 aa		19.78	■□□□□ 0.76
EDC4-210	ENST00000575507	CDCA8	Q53HL2	280 aa		19.78	■□□□□ 0.76
EDC4-210	ENST00000575507	COG3	Q96JB2	828 aa		19.78	■□□□□ 0.76
EDC4-210	ENST00000575507	ERBB3	P21860	1342 aa		19.77	■□□□□ 0.76
EDC4-210	ENST00000575507	DDB1	Q16531	1140 aa		19.76	■□□□□ 0.75
EDC4-210	ENST00000575507	MARCH10	Q8NA82	808 aa	Predicted RBP	19.76	■□□□□ 0.75
EDC4-210	ENST00000575507	ANKRD24	Q8TF21	1146 aa		19.76	■□□□□ 0.75
EDC4-210	ENST00000575507	IP6K1	Q92551	441 aa		19.76	■□□□□ 0.75
EDC4-210	ENST00000575507	DISP2	A7MBM2	1401 aa		19.76	■□□□□ 0.75
EDC4-210	ENST00000575507	MAP3K19	Q56UN5	1328 aa		19.76	■□□□□ 0.75
EDC4-210	ENST00000575507	EZH2	Q15910	746 aa	Known RBP	19.75	■□□□□ 0.75
EDC4-210	ENST00000575507	PTF1A	Q7RTS3	328 aa		19.75	■□□□□ 0.75
EDC4-210	ENST00000575507	CAMKK2	Q96RR4	588 aa		19.75	■□□□□ 0.75
EDC4-210	ENST00000575507	APBA3	O96018	575 aa		19.74	■□□□□ 0.75
EDC4-210	ENST00000575507	EIF4G2	P78344	907 aa	Known RBP eCLIP	19.74	■□□□□ 0.75
EDC4-210	ENST00000575507	NLRP2	Q9NX02	1062 aa		19.74	■□□□□ 0.75
EDC4-210	ENST00000575507	ABCC6	O95255	1503 aa		19.74	■□□□□ 0.75
EDC4-210	ENST00000575507	PARP4	Q9UKK3	1724 aa	Known RBP	19.73	■□□□□ 0.75
EDC4-210	ENST00000575507	C11orf95	C9JLR9	678 aa	Predicted RBP	19.73	■□□□□ 0.75
EDC4-210	ENST00000575507	HOXC9	P31274	260 aa		19.72	■□□□□ 0.75
EDC4-210	ENST00000575507	RRS1	Q15050	365 aa	Known RBP	19.72	■□□□□ 0.75
EDC4-210	ENST00000575507	LTV1	Q96GA3	475 aa	Predicted RBP	19.72	■□□□□ 0.75
EDC4-210	ENST00000575507	CDCA7	Q9BWT1	371 aa	Predicted RBP	19.72	■□□□□ 0.75
EDC4-210	ENST00000575507	CCDC7	Q96M83	1385 aa		19.71	■□□□□ 0.75
EDC4-210	ENST00000575507	LRRC37A3	O60309	1634 aa		19.71	■□□□□ 0.75
EDC4-210	ENST00000575507	TNS1	Q9HBL0	1735 aa	Known RBP	19.71	■□□□□ 0.75
EDC4-210	ENST00000575507	EXOC5	O00471	708 aa		19.7	■□□□□ 0.74
EDC4-210	ENST00000575507	POLR3GL	Q9BT43	218 aa		19.7	■□□□□ 0.74
EDC4-210	ENST00000575507	MYOM1	P52179	1685 aa		19.7	■□□□□ 0.74
EDC4-210	ENST00000575507	LTN1	O94822	1766 aa		19.7	■□□□□ 0.74
EDC4-210	ENST00000575507	RGPD1	P0DJD0	1748 aa		19.69	■□□□□ 0.74
EDC4-210	ENST00000575507	PEAK1	Q9H792	1746 aa		19.69	■□□□□ 0.74
EDC4-210	ENST00000575507	AMPH	P49418	695 aa		19.69	■□□□□ 0.74
EDC4-210	ENST00000575507	NSD3	Q9BZ95	1437 aa		19.68	■□□□□ 0.74
EDC4-210	ENST00000575507	PSD	A5PKW4	1024 aa	Predicted RBP	19.68	■□□□□ 0.74
EDC4-210	ENST00000575507	OVOS2	A0A0G2JMS6	1433 aa		19.68	■□□□□ 0.74
EDC4-210	ENST00000575507	IL2RB	P14784	551 aa		19.66	■□□□□ 0.74
EDC4-210	ENST00000575507	KCNQ2	O43526	872 aa		19.64	■□□□□ 0.73
EDC4-210	ENST00000575507	HSP90AB2P	Q58FF8	381 aa		19.64	■□□□□ 0.73
EDC4-210	ENST00000575507	WNK3	Q9BYP7	1800 aa		19.64	■□□□□ 0.73
EDC4-210	ENST00000575507	BCL9	O00512	1426 aa		19.63	■□□□□ 0.73
EDC4-210	ENST00000575507	R3HDM1	Q15032	1099 aa	Known RBP	19.63	■□□□□ 0.73
EDC4-210	ENST00000575507	NBPF6	Q5VWK0	638 aa		19.63	■□□□□ 0.73
EDC4-210	ENST00000575507	NBPF4	Q96M43	638 aa		19.63	■□□□□ 0.73
EDC4-210	ENST00000575507	BCL11B	Q9C0K0	894 aa	Predicted RBP	19.63	■□□□□ 0.73
EDC4-210	ENST00000575507	TNS2	Q63HR2	1409 aa		19.62	■□□□□ 0.73
EDC4-210	ENST00000575507	PANK3	Q9H999	370 aa		19.62	■□□□□ 0.73
EDC4-210	ENST00000575507	EMILIN1	Q9Y6C2	1016 aa		19.62	■□□□□ 0.73
EDC4-210	ENST00000575507	PROM2	Q8N271	834 aa		19.61	■□□□□ 0.73
EDC4-210	ENST00000575507	PLSCR1	O15162	318 aa		19.6	■□□□□ 0.73
EDC4-210	ENST00000575507	USHBP1	Q8N6Y0	703 aa		19.6	■□□□□ 0.73
EDC4-210	ENST00000575507	RTL1	A6NKG5	1358 aa		19.59	■□□□□ 0.73
EDC4-210	ENST00000575507	CGNL1	Q0VF96	1302 aa		19.59	■□□□□ 0.73
EDC4-210	ENST00000575507	ACSBG1	Q96GR2	724 aa		19.59	■□□□□ 0.73
EDC4-210	ENST00000575507	INSR	P06213	1382 aa		19.58	■□□□□ 0.73
EDC4-210	ENST00000575507	PARD3	Q8TEW0	1356 aa		19.58	■□□□□ 0.73
EDC4-210	ENST00000575507	DDX54	Q8TDD1	881 aa	Known RBP	19.57	■□□□□ 0.72
EDC4-210	ENST00000575507	POLK	Q9UBT6	870 aa		19.57	■□□□□ 0.72
EDC4-210	ENST00000575507	KIF20B	Q96Q89	1820 aa		19.57	■□□□□ 0.72
EDC4-210	ENST00000575507	SBF2	Q86WG5	1849 aa		19.56	■□□□□ 0.72
EDC4-210	ENST00000575507	FLT4	P35916	1363 aa		19.56	■□□□□ 0.72
EDC4-210	ENST00000575507	FAM208A	Q9UK61	1670 aa	Known RBP	19.56	■□□□□ 0.72
EDC4-210	ENST00000575507	PPM1G	O15355	546 aa	Predicted RBP	19.55	■□□□□ 0.72
EDC4-210	ENST00000575507	TNNT2	P45379	298 aa	Predicted RBP	19.55	■□□□□ 0.72
EDC4-210	ENST00000575507	MEGF6	O75095	1541 aa		19.55	■□□□□ 0.72
EDC4-210	ENST00000575507	KIF7	Q2M1P5	1343 aa		19.54	■□□□□ 0.72
EDC4-210	ENST00000575507	RGPD2	P0DJD1	1756 aa		19.54	■□□□□ 0.72
EDC4-210	ENST00000575507	RREB1	Q92766	1687 aa		19.53	■□□□□ 0.72
EDC4-210	ENST00000575507	ZCRB1	Q8TBF4	217 aa	Known RBP	19.53	■□□□□ 0.72
EDC4-210	ENST00000575507	KIF24	Q5T7B8	1368 aa		19.53	■□□□□ 0.72
EDC4-210	ENST00000575507	WASHC2A	Q641Q2	1341 aa		19.52	■□□□□ 0.72
EDC4-210	ENST00000575507	ANO8	Q9HCE9	1232 aa	Predicted RBP	19.52	■□□□□ 0.72
EDC4-210	ENST00000575507	NUP188	Q5SRE5	1749 aa		19.51	■□□□□ 0.71
EDC4-210	ENST00000575507	TXNRD1	Q16881	649 aa		19.51	■□□□□ 0.71
EDC4-210	ENST00000575507	NBPF14	Q5TI25	921 aa		19.5	■□□□□ 0.71
EDC4-210	ENST00000575507	EYA1	Q99502	592 aa		19.49	■□□□□ 0.71
EDC4-210	ENST00000575507	PRIM1	P49642	420 aa	Known RBP	19.48	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms