RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
LITAF-217ENST00000575426 CDK12Q9NYV4 1490 aaPredicted RBP20.85■□□□□ 0.93
LITAF-217ENST00000575426 MAP2P11137 1827 aaKnown RBP20.83■□□□□ 0.93
LITAF-217ENST00000575426 GLI3P10071 1580 aa20.83■□□□□ 0.92
LITAF-217ENST00000575426 ABCC6O95255 1503 aa20.83■□□□□ 0.92
LITAF-217ENST00000575426 AMPHP49418 695 aa20.82■□□□□ 0.92
LITAF-217ENST00000575426 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
LITAF-217ENST00000575426 SPATA31A5Q5VU36 1347 aa20.81■□□□□ 0.92
LITAF-217ENST00000575426 SPATA31A7Q8IWB4 1347 aa20.81■□□□□ 0.92
LITAF-217ENST00000575426 CSB-PGBD3P0DP91 1061 aa20.81■□□□□ 0.92
LITAF-217ENST00000575426 AXIN2Q9Y2T1 843 aa20.81■□□□□ 0.92
LITAF-217ENST00000575426 A0A0G2JS52 829 aa20.8■□□□□ 0.92
LITAF-217ENST00000575426 MYT1Q01538 1121 aa20.8■□□□□ 0.92
LITAF-217ENST00000575426 LARP1Q6PKG0 1096 aaKnown RBP20.8■□□□□ 0.92
LITAF-217ENST00000575426 USP35Q9P2H5 1018 aa20.8■□□□□ 0.92
LITAF-217ENST00000575426 NSD2O96028 1365 aa20.8■□□□□ 0.92
LITAF-217ENST00000575426 FBLN1P23142 703 aa20.79■□□□□ 0.92
LITAF-217ENST00000575426 TOM1L2Q6ZVM7 507 aa20.79■□□□□ 0.92
LITAF-217ENST00000575426 IP6K1Q92551 441 aa20.79■□□□□ 0.92
LITAF-217ENST00000575426 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
LITAF-217ENST00000575426 SPATA31A1Q5TZJ5 1347 aa20.78■□□□□ 0.92
LITAF-217ENST00000575426 RGS12O14924 1447 aa20.78■□□□□ 0.92
LITAF-217ENST00000575426 RRS1Q15050 365 aaKnown RBP20.77■□□□□ 0.92
LITAF-217ENST00000575426 FAM98CQ17RN3 349 aaKnown RBP20.77■□□□□ 0.92
LITAF-217ENST00000575426 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
LITAF-217ENST00000575426 CRB1P82279 1406 aa20.77■□□□□ 0.91
LITAF-217ENST00000575426 WDR17Q8IZU2 1322 aa20.77■□□□□ 0.91
LITAF-217ENST00000575426 BRWD3Q6RI45 1802 aa20.76■□□□□ 0.91
LITAF-217ENST00000575426 BLMP54132 1417 aaPredicted RBP20.76■□□□□ 0.91
LITAF-217ENST00000575426 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
LITAF-217ENST00000575426 HOXC9P31274 260 aa20.75■□□□□ 0.91
LITAF-217ENST00000575426 TNNT2P45379 298 aaPredicted RBP20.75■□□□□ 0.91
LITAF-217ENST00000575426 SEPT12Q8IYM1 358 aa20.75■□□□□ 0.91
LITAF-217ENST00000575426 TCP11L2Q8N4U5 519 aa20.75■□□□□ 0.91
LITAF-217ENST00000575426 THRAP3Q9Y2W1 955 aaKnown RBP20.75■□□□□ 0.91
LITAF-217ENST00000575426 RTL1A6NKG5 1358 aa20.74■□□□□ 0.91
LITAF-217ENST00000575426 PER1O15534 1290 aaPredicted RBP20.74■□□□□ 0.91
LITAF-217ENST00000575426 ANKRD24Q8TF21 1146 aa20.74■□□□□ 0.91
LITAF-217ENST00000575426 SOCS7O14512 581 aa20.73■□□□□ 0.91
LITAF-217ENST00000575426 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
LITAF-217ENST00000575426 LTV1Q96GA3 475 aaPredicted RBP20.73■□□□□ 0.91
LITAF-217ENST00000575426 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
LITAF-217ENST00000575426 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
LITAF-217ENST00000575426 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
LITAF-217ENST00000575426 BARGINQ6ZT62 677 aa20.72■□□□□ 0.91
LITAF-217ENST00000575426 NLRP2Q9NX02 1062 aa20.72■□□□□ 0.91
LITAF-217ENST00000575426 ERBB3P21860 1342 aa20.72■□□□□ 0.91
LITAF-217ENST00000575426 CARD10Q9BWT7 1032 aa20.71■□□□□ 0.91
LITAF-217ENST00000575426 FLT4P35916 1363 aa20.71■□□□□ 0.91
LITAF-217ENST00000575426 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
LITAF-217ENST00000575426 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
LITAF-217ENST00000575426 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
LITAF-217ENST00000575426 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
LITAF-217ENST00000575426 PEAK1Q9H792 1746 aa20.69■□□□□ 0.9
LITAF-217ENST00000575426 RGPD2P0DJD1 1756 aa20.69■□□□□ 0.9
LITAF-217ENST00000575426 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
LITAF-217ENST00000575426 THSD7AQ9UPZ6 1657 aa20.68■□□□□ 0.9
LITAF-217ENST00000575426 POLKQ9UBT6 870 aa20.68■□□□□ 0.9
LITAF-217ENST00000575426 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
LITAF-217ENST00000575426 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
LITAF-217ENST00000575426 CDCA7Q9BWT1 371 aaPredicted RBP20.67■□□□□ 0.9
LITAF-217ENST00000575426 INSRP06213 1382 aa20.67■□□□□ 0.9
LITAF-217ENST00000575426 NPC1L1Q9UHC9 1359 aa20.67■□□□□ 0.9
LITAF-217ENST00000575426 PARP4Q9UKK3 1724 aaKnown RBP20.65■□□□□ 0.9
LITAF-217ENST00000575426 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
LITAF-217ENST00000575426 DDX10Q13206 875 aaKnown RBP20.63■□□□□ 0.89
LITAF-217ENST00000575426 DDB1Q16531 1140 aa20.61■□□□□ 0.89
LITAF-217ENST00000575426 EXOC5O00471 708 aa20.6■□□□□ 0.89
LITAF-217ENST00000575426 IL2RBP14784 551 aa20.6■□□□□ 0.89
LITAF-217ENST00000575426 NBPF6Q5VWK0 638 aa20.59■□□□□ 0.89
LITAF-217ENST00000575426 NBPF4Q96M43 638 aa20.59■□□□□ 0.89
LITAF-217ENST00000575426 LRRC37A3O60309 1634 aa20.58■□□□□ 0.89
LITAF-217ENST00000575426 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
LITAF-217ENST00000575426 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.896e-7■■□□□ 13.5
LITAF-217ENST00000575426 MTHFSP49914 203 aa20.57■□□□□ 0.88
LITAF-217ENST00000575426 DISP2A7MBM2 1401 aa20.56■□□□□ 0.88
LITAF-217ENST00000575426 USHBP1Q8N6Y0 703 aa20.56■□□□□ 0.88
LITAF-217ENST00000575426 KAT6BQ8WYB5 2073 aa20.56■□□□□ 0.88
LITAF-217ENST00000575426 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
LITAF-217ENST00000575426 FAM182BQ5T319 152 aa20.55■□□□□ 0.88
LITAF-217ENST00000575426 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
LITAF-217ENST00000575426 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
LITAF-217ENST00000575426 CCDC125Q86Z20 511 aa20.54■□□□□ 0.88
LITAF-217ENST00000575426 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
LITAF-217ENST00000575426 SF3B2Q13435 895 aaKnown RBP20.53■□□□□ 0.88
LITAF-217ENST00000575426 EYA1Q99502 592 aa20.53■□□□□ 0.88
LITAF-217ENST00000575426 TNS2Q63HR2 1409 aa20.51■□□□□ 0.87
LITAF-217ENST00000575426 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
LITAF-217ENST00000575426 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
LITAF-217ENST00000575426 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
LITAF-217ENST00000575426 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
LITAF-217ENST00000575426 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
LITAF-217ENST00000575426 DIAPH1O60610 1272 aaKnown RBP20.48■□□□□ 0.87
LITAF-217ENST00000575426 PPP2R1AP30153 589 aa20.48■□□□□ 0.87
LITAF-217ENST00000575426 MARCH10Q8NA82 808 aaPredicted RBP20.48■□□□□ 0.87
LITAF-217ENST00000575426 IL13P35225 146 aa20.47■□□□□ 0.87
LITAF-217ENST00000575426 DDX54Q8TDD1 881 aaKnown RBP20.47■□□□□ 0.87
LITAF-217ENST00000575426 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
LITAF-217ENST00000575426 MEGF6O75095 1541 aa20.47■□□□□ 0.87
LITAF-217ENST00000575426 RALBP1Q15311 655 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms