RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
TVP23A-209ENST00000575135 SOX12O15370 315 aa23.95■■□□□ 1.42
TVP23A-209ENST00000575135 LRRC37A3O60309 1634 aa23.95■■□□□ 1.42
TVP23A-209ENST00000575135 CPSF1Q10570 1443 aaKnown RBP23.94■■□□□ 1.42
TVP23A-209ENST00000575135 KCNH5Q8NCM2 988 aa23.94■■□□□ 1.42
TVP23A-209ENST00000575135 TTC21AQ8NDW8 1320 aa23.93■■□□□ 1.42
TVP23A-209ENST00000575135 SBF2Q86WG5 1849 aa23.93■■□□□ 1.42
TVP23A-209ENST00000575135 RGPD5Q99666 1765 aa23.93■■□□□ 1.42
TVP23A-209ENST00000575135 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
TVP23A-209ENST00000575135 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
TVP23A-209ENST00000575135 MARCH10Q8NA82 808 aaPredicted RBP23.9■■□□□ 1.42
TVP23A-209ENST00000575135 CDCA7Q9BWT1 371 aaPredicted RBP23.9■■□□□ 1.42
TVP23A-209ENST00000575135 WNK3Q9BYP7 1800 aa23.89■■□□□ 1.42
TVP23A-209ENST00000575135 PLSCR1O15162 318 aa23.89■■□□□ 1.41
TVP23A-209ENST00000575135 CSB-PGBD3P0DP91 1061 aa23.89■■□□□ 1.41
TVP23A-209ENST00000575135 CARD10Q9BWT7 1032 aa23.89■■□□□ 1.41
TVP23A-209ENST00000575135 BCL11BQ9C0K0 894 aaPredicted RBP23.89■■□□□ 1.41
TVP23A-209ENST00000575135 NFAT5O94916 1531 aa23.87■■□□□ 1.41
TVP23A-209ENST00000575135 RGPD3A6NKT7 1758 aaPredicted RBP23.86■■□□□ 1.41
TVP23A-209ENST00000575135 RGPD4Q7Z3J3 1758 aa23.86■■□□□ 1.41
TVP23A-209ENST00000575135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
TVP23A-209ENST00000575135 MON2Q7Z3U7 1717 aa23.84■■□□□ 1.41
TVP23A-209ENST00000575135 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
TVP23A-209ENST00000575135 SPON1Q9HCB6 807 aa23.84■■□□□ 1.41
TVP23A-209ENST00000575135 KCNQ2O43526 872 aa23.83■■□□□ 1.41
TVP23A-209ENST00000575135 PROM2Q8N271 834 aa23.83■■□□□ 1.41
TVP23A-209ENST00000575135 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.41
TVP23A-209ENST00000575135 BCL9O00512 1426 aa23.83■■□□□ 1.4
TVP23A-209ENST00000575135 EXOC5O00471 708 aa23.82■■□□□ 1.4
TVP23A-209ENST00000575135 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
TVP23A-209ENST00000575135 USP31Q70CQ4 1352 aa23.81■■□□□ 1.4
TVP23A-209ENST00000575135 NME9Q86XW9 330 aa23.81■■□□□ 1.4
TVP23A-209ENST00000575135 TMC1Q8TDI8 760 aa23.81■■□□□ 1.4
TVP23A-209ENST00000575135 PPP1R1BQ9UD71 204 aaPredicted RBP23.81■■□□□ 1.4
TVP23A-209ENST00000575135 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
TVP23A-209ENST00000575135 CCDC7Q96M83 1385 aa23.8■■□□□ 1.4
TVP23A-209ENST00000575135 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
TVP23A-209ENST00000575135 ABCC6O95255 1503 aa23.79■■□□□ 1.4
TVP23A-209ENST00000575135 HDGFL2Q7Z4V5 671 aaPredicted RBP23.76■■□□□ 1.39
TVP23A-209ENST00000575135 PDGFDQ9GZP0 370 aaPredicted RBP23.76■■□□□ 1.39
TVP23A-209ENST00000575135 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
TVP23A-209ENST00000575135 TXNRD1Q16881 649 aa23.75■■□□□ 1.39
TVP23A-209ENST00000575135 NLRP2Q9NX02 1062 aa23.75■■□□□ 1.39
TVP23A-209ENST00000575135 ERBB3P21860 1342 aa23.75■■□□□ 1.39
TVP23A-209ENST00000575135 LTN1O94822 1766 aa23.75■■□□□ 1.39
TVP23A-209ENST00000575135 TNS2Q63HR2 1409 aa23.75■■□□□ 1.39
TVP23A-209ENST00000575135 CASZ1Q86V15 1759 aa23.74■■□□□ 1.39
TVP23A-209ENST00000575135 TERF2IPQ9NYB0 399 aa23.72■■□□□ 1.39
TVP23A-209ENST00000575135 EDC4Q6P2E9 1401 aaKnown RBP23.72■■□□□ 1.39
TVP23A-209ENST00000575135 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
TVP23A-209ENST00000575135 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
TVP23A-209ENST00000575135 ANKRD24Q8TF21 1146 aa23.71■■□□□ 1.39
TVP23A-209ENST00000575135 A0A1W2PP64 1363 aa23.7■■□□□ 1.38
TVP23A-209ENST00000575135 ZBTB7AO95365 584 aa23.7■■□□□ 1.38
TVP23A-209ENST00000575135 IL2RBP14784 551 aa23.7■■□□□ 1.38
TVP23A-209ENST00000575135 ACSBG1Q96GR2 724 aa23.7■■□□□ 1.38
TVP23A-209ENST00000575135 STK32BQ9NY57 414 aa23.7■■□□□ 1.38
TVP23A-209ENST00000575135 NHSQ6T4R5 1651 aa23.68■■□□□ 1.38
TVP23A-209ENST00000575135 YY1P25490 414 aa23.68■■□□□ 1.38
TVP23A-209ENST00000575135 SLC15A2Q16348 729 aa23.68■■□□□ 1.38
TVP23A-209ENST00000575135 PUS7Q96PZ0 661 aaKnown RBP23.68■■□□□ 1.38
TVP23A-209ENST00000575135 DCAF8L1A6NGE4 600 aa23.66■■□□□ 1.38
TVP23A-209ENST00000575135 ATF5Q9Y2D1 282 aaPredicted RBP23.66■■□□□ 1.38
TVP23A-209ENST00000575135 KAT6BQ8WYB5 2073 aa23.66■■□□□ 1.38
TVP23A-209ENST00000575135 PTGER2P43116 358 aa23.65■■□□□ 1.38
TVP23A-209ENST00000575135 IP6K1Q92551 441 aa23.64■■□□□ 1.37
TVP23A-209ENST00000575135 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
TVP23A-209ENST00000575135 TESK2Q96S53 571 aa23.63■■□□□ 1.37
TVP23A-209ENST00000575135 LTV1Q96GA3 475 aaPredicted RBP23.62■■□□□ 1.37
TVP23A-209ENST00000575135 BTAF1O14981 1849 aa23.61■■□□□ 1.37
TVP23A-209ENST00000575135 MYOM1P52179 1685 aa23.61■■□□□ 1.37
TVP23A-209ENST00000575135 FBLN1P23142 703 aa23.58■■□□□ 1.37
TVP23A-209ENST00000575135 DDX54Q8TDD1 881 aaKnown RBP23.58■■□□□ 1.37
TVP23A-209ENST00000575135 COG3Q96JB2 828 aa23.58■■□□□ 1.37
TVP23A-209ENST00000575135 MTFR1LQ9H019 292 aa23.58■■□□□ 1.37
TVP23A-209ENST00000575135 UTRNP46939 3433 aa23.58■■□□□ 1.36
TVP23A-209ENST00000575135 MAP3K19Q56UN5 1328 aa23.57■■□□□ 1.36
TVP23A-209ENST00000575135 PAPPAQ13219 1627 aa23.56■■□□□ 1.36
TVP23A-209ENST00000575135 LRRC4BQ9NT99 713 aa23.56■■□□□ 1.36
TVP23A-209ENST00000575135 FAM208AQ9UK61 1670 aaKnown RBP23.55■■□□□ 1.36
TVP23A-209ENST00000575135 HOXC9P31274 260 aa23.55■■□□□ 1.36
TVP23A-209ENST00000575135 SGIP1Q9BQI5 828 aa23.55■■□□□ 1.36
TVP23A-209ENST00000575135 FHDC1Q9C0D6 1143 aaPredicted RBP23.55■■□□□ 1.36
TVP23A-209ENST00000575135 SLC24A1O60721 1099 aa23.54■■□□□ 1.36
TVP23A-209ENST00000575135 AMPHP49418 695 aa23.54■■□□□ 1.36
TVP23A-209ENST00000575135 ZNF827Q17R98 1081 aa23.54■■□□□ 1.36
TVP23A-209ENST00000575135 SYT17Q9BSW7 474 aa23.54■■□□□ 1.36
TVP23A-209ENST00000575135 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
TVP23A-209ENST00000575135 ANKRD36BQ8N2N9 1353 aa23.51■■□□□ 1.35
TVP23A-209ENST00000575135 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
TVP23A-209ENST00000575135 ARXQ96QS3 562 aa23.49■■□□□ 1.35
TVP23A-209ENST00000575135 FYB1O15117 783 aa23.48■■□□□ 1.35
TVP23A-209ENST00000575135 PRIM1P49642 420 aaKnown RBP23.48■■□□□ 1.35
TVP23A-209ENST00000575135 RRS1Q15050 365 aaKnown RBP23.48■■□□□ 1.35
TVP23A-209ENST00000575135 SLC27A3Q5K4L6 730 aa23.48■■□□□ 1.35
TVP23A-209ENST00000575135 ZCRB1Q8TBF4 217 aaKnown RBP23.48■■□□□ 1.35
TVP23A-209ENST00000575135 AKT1S1Q96B36 256 aa23.48■■□□□ 1.35
TVP23A-209ENST00000575135 GGNBP2Q9H3C7 697 aa23.47■■□□□ 1.35
TVP23A-209ENST00000575135 MEGF6O75095 1541 aa23.46■■□□□ 1.35
TVP23A-209ENST00000575135 KCNQ4P56696 695 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms