RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 NFAT5O94916 1531 aa23.1■■□□□ 1.29
TVP23B-206ENST00000574226 C11orf95C9JLR9 678 aaPredicted RBP23.1■■□□□ 1.29
TVP23B-206ENST00000574226 PDE3BQ13370 1112 aa23.09■■□□□ 1.29
TVP23B-206ENST00000574226 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
TVP23B-206ENST00000574226 ZRANB1Q9UGI0 708 aa23.09■■□□□ 1.29
TVP23B-206ENST00000574226 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.29
TVP23B-206ENST00000574226 BAG6P46379 1132 aa23.08■■□□□ 1.29
TVP23B-206ENST00000574226 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
TVP23B-206ENST00000574226 RGPD1P0DJD0 1748 aa23.08■■□□□ 1.28
TVP23B-206ENST00000574226 TOM1L2Q6ZVM7 507 aa23.07■■□□□ 1.28
TVP23B-206ENST00000574226 NME9Q86XW9 330 aa23.07■■□□□ 1.28
TVP23B-206ENST00000574226 CDCA7Q9BWT1 371 aaPredicted RBP23.07■■□□□ 1.28
TVP23B-206ENST00000574226 PARP4Q9UKK3 1724 aaKnown RBP23.05■■□□□ 1.28
TVP23B-206ENST00000574226 ANKRD36BQ8N2N9 1353 aa23.05■■□□□ 1.28
TVP23B-206ENST00000574226 SOX12O15370 315 aa23.05■■□□□ 1.28
TVP23B-206ENST00000574226 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
TVP23B-206ENST00000574226 RGPD5Q99666 1765 aa23.02■■□□□ 1.28
TVP23B-206ENST00000574226 OVOS2A0A0J9YW53 1432 aa23.02■■□□□ 1.28
TVP23B-206ENST00000574226 OVOS2Q6IE36 1432 aa23.02■■□□□ 1.28
TVP23B-206ENST00000574226 CSB-PGBD3P0DP91 1061 aa23.02■■□□□ 1.28
TVP23B-206ENST00000574226 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
TVP23B-206ENST00000574226 CARD10Q9BWT7 1032 aa23.02■■□□□ 1.28
TVP23B-206ENST00000574226 DISP2A7MBM2 1401 aa23■■□□□ 1.27
TVP23B-206ENST00000574226 LTN1O94822 1766 aa23■■□□□ 1.27
TVP23B-206ENST00000574226 FAM182BQ5T319 152 aa23■■□□□ 1.27
TVP23B-206ENST00000574226 COG3Q96JB2 828 aa23■■□□□ 1.27
TVP23B-206ENST00000574226 CCDC7Q96M83 1385 aa23■■□□□ 1.27
TVP23B-206ENST00000574226 DDB1Q16531 1140 aa22.98■■□□□ 1.27
TVP23B-206ENST00000574226 TNS1Q9HBL0 1735 aaKnown RBP22.96■■□□□ 1.27
TVP23B-206ENST00000574226 WNK3Q9BYP7 1800 aa22.96■■□□□ 1.27
TVP23B-206ENST00000574226 ERBB3P21860 1342 aa22.96■■□□□ 1.27
TVP23B-206ENST00000574226 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
TVP23B-206ENST00000574226 OVOS2A0A0G2JMS6 1433 aa22.95■■□□□ 1.26
TVP23B-206ENST00000574226 TRIM37O94972 964 aa22.94■■□□□ 1.26
TVP23B-206ENST00000574226 LRRC37A3O60309 1634 aa22.93■■□□□ 1.26
TVP23B-206ENST00000574226 EIF4G2P78344 907 aaKnown RBP eCLIP22.93■■□□□ 1.26
TVP23B-206ENST00000574226 IP6K1Q92551 441 aa22.93■■□□□ 1.26
TVP23B-206ENST00000574226 EN1Q05925 392 aaPredicted RBP22.92■■□□□ 1.26
TVP23B-206ENST00000574226 NLRP2Q9NX02 1062 aa22.91■■□□□ 1.26
TVP23B-206ENST00000574226 BCL9O00512 1426 aa22.91■■□□□ 1.26
TVP23B-206ENST00000574226 EXOC5O00471 708 aa22.9■■□□□ 1.26
TVP23B-206ENST00000574226 FYB1O15117 783 aa22.9■■□□□ 1.26
TVP23B-206ENST00000574226 APBA3O96018 575 aa22.9■■□□□ 1.26
TVP23B-206ENST00000574226 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
TVP23B-206ENST00000574226 FAM208AQ9UK61 1670 aaKnown RBP22.9■■□□□ 1.26
TVP23B-206ENST00000574226 PEAK1Q9H792 1746 aa22.89■■□□□ 1.26
TVP23B-206ENST00000574226 MYOM1P52179 1685 aa22.88■■□□□ 1.25
TVP23B-206ENST00000574226 RTL1A6NKG5 1358 aa22.88■■□□□ 1.25
TVP23B-206ENST00000574226 KIF20BQ96Q89 1820 aa22.87■■□□□ 1.25
TVP23B-206ENST00000574226 AMPHP49418 695 aa22.87■■□□□ 1.25
TVP23B-206ENST00000574226 CAMKK2Q96RR4 588 aa22.87■■□□□ 1.25
TVP23B-206ENST00000574226 MAP3K19Q56UN5 1328 aa22.86■■□□□ 1.25
TVP23B-206ENST00000574226 SBF2Q86WG5 1849 aa22.85■■□□□ 1.25
TVP23B-206ENST00000574226 TNS2Q63HR2 1409 aa22.85■■□□□ 1.25
TVP23B-206ENST00000574226 IL2RBP14784 551 aa22.85■■□□□ 1.25
TVP23B-206ENST00000574226 GGNBP2Q9H3C7 697 aa22.85■■□□□ 1.25
TVP23B-206ENST00000574226 HOXC9P31274 260 aa22.84■■□□□ 1.25
TVP23B-206ENST00000574226 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
TVP23B-206ENST00000574226 MARCH10Q8NA82 808 aaPredicted RBP22.84■■□□□ 1.25
TVP23B-206ENST00000574226 KIF24Q5T7B8 1368 aa22.84■■□□□ 1.25
TVP23B-206ENST00000574226 BCL11BQ9C0K0 894 aaPredicted RBP22.83■■□□□ 1.25
TVP23B-206ENST00000574226 NSD3Q9BZ95 1437 aa22.82■■□□□ 1.24
TVP23B-206ENST00000574226 HSPA5P11021 654 aaKnown RBP22.82■■□□□ 1.24
TVP23B-206ENST00000574226 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
TVP23B-206ENST00000574226 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
TVP23B-206ENST00000574226 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
TVP23B-206ENST00000574226 PLSCR1O15162 318 aa22.81■■□□□ 1.24
TVP23B-206ENST00000574226 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
TVP23B-206ENST00000574226 RREB1Q92766 1687 aa22.79■■□□□ 1.24
TVP23B-206ENST00000574226 SMG6Q86US8 1419 aaKnown RBP22.79■■□□□ 1.24
TVP23B-206ENST00000574226 NBPF14Q5TI25 921 aa22.78■■□□□ 1.24
TVP23B-206ENST00000574226 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
TVP23B-206ENST00000574226 LTV1Q96GA3 475 aaPredicted RBP22.77■■□□□ 1.24
TVP23B-206ENST00000574226 FLT4P35916 1363 aa22.76■■□□□ 1.23
TVP23B-206ENST00000574226 POLR3GLQ9BT43 218 aa22.76■■□□□ 1.23
TVP23B-206ENST00000574226 INSRP06213 1382 aa22.76■■□□□ 1.23
TVP23B-206ENST00000574226 FBLN1P23142 703 aa22.75■■□□□ 1.23
TVP23B-206ENST00000574226 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
TVP23B-206ENST00000574226 LRP5O75197 1615 aa22.73■■□□□ 1.23
TVP23B-206ENST00000574226 PSDA5PKW4 1024 aaPredicted RBP22.73■■□□□ 1.23
TVP23B-206ENST00000574226 R3HDM1Q15032 1099 aaKnown RBP22.72■■□□□ 1.23
TVP23B-206ENST00000574226 SRCAPQ6ZRS2 3230 aa22.72■■□□□ 1.23
TVP23B-206ENST00000574226 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
TVP23B-206ENST00000574226 KAT6BQ8WYB5 2073 aa22.7■■□□□ 1.23
TVP23B-206ENST00000574226 RGPD2P0DJD1 1756 aa22.69■■□□□ 1.22
TVP23B-206ENST00000574226 ANKRD26Q9UPS8 1709 aa22.69■■□□□ 1.22
TVP23B-206ENST00000574226 NSD2O96028 1365 aa22.69■■□□□ 1.22
TVP23B-206ENST00000574226 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
TVP23B-206ENST00000574226 NBPF6Q5VWK0 638 aa22.68■■□□□ 1.22
TVP23B-206ENST00000574226 RAPGEF4Q8WZA2 1011 aa22.68■■□□□ 1.22
TVP23B-206ENST00000574226 NBPF4Q96M43 638 aa22.68■■□□□ 1.22
TVP23B-206ENST00000574226 PANK3Q9H999 370 aa22.68■■□□□ 1.22
TVP23B-206ENST00000574226 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
TVP23B-206ENST00000574226 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
TVP23B-206ENST00000574226 WASHC2AQ641Q2 1341 aa22.66■■□□□ 1.22
TVP23B-206ENST00000574226 DDX54Q8TDD1 881 aaKnown RBP22.66■■□□□ 1.22
TVP23B-206ENST00000574226 PTF1AQ7RTS3 328 aa22.65■■□□□ 1.22
TVP23B-206ENST00000574226 EMILIN1Q9Y6C2 1016 aa22.65■■□□□ 1.22
TVP23B-206ENST00000574226 TATP17735 454 aaPredicted RBP22.64■■□□□ 1.21
TVP23B-206ENST00000574226 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms