RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 NGLY1Q96IV0 654 aa18.37■□□□□ 0.53
NDE1-209ENST00000574109 INSRP06213 1382 aa18.36■□□□□ 0.53
NDE1-209ENST00000574109 AMPHP49418 695 aa18.36■□□□□ 0.53
NDE1-209ENST00000574109 AFF2P51816 1311 aa18.35■□□□□ 0.53
NDE1-209ENST00000574109 ZNF772Q68DY9 489 aaPredicted RBP18.35■□□□□ 0.53
NDE1-209ENST00000574109 IP6K1Q92551 441 aa18.35■□□□□ 0.53
NDE1-209ENST00000574109 BCL9LQ86UU0 1499 aa18.34■□□□□ 0.53
NDE1-209ENST00000574109 FAM83GA6ND36 823 aa18.34■□□□□ 0.53
NDE1-209ENST00000574109 ERBB3P21860 1342 aa18.33■□□□□ 0.53
NDE1-209ENST00000574109 HOXC9P31274 260 aa18.33■□□□□ 0.52
NDE1-209ENST00000574109 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
NDE1-209ENST00000574109 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.52
NDE1-209ENST00000574109 CHRNA2Q15822 529 aa18.33■□□□□ 0.52
NDE1-209ENST00000574109 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
NDE1-209ENST00000574109 BTG4Q9NY30 223 aa18.33■□□□□ 0.52
NDE1-209ENST00000574109 POLKQ9UBT6 870 aa18.33■□□□□ 0.52
NDE1-209ENST00000574109 ATRNO75882 1429 aa18.32■□□□□ 0.52
NDE1-209ENST00000574109 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
NDE1-209ENST00000574109 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
NDE1-209ENST00000574109 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
NDE1-209ENST00000574109 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
NDE1-209ENST00000574109 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
NDE1-209ENST00000574109 PARP4Q9UKK3 1724 aaKnown RBP18.32■□□□□ 0.52
NDE1-209ENST00000574109 CRB1P82279 1406 aa18.32■□□□□ 0.52
NDE1-209ENST00000574109 WDR17Q8IZU2 1322 aa18.31■□□□□ 0.52
NDE1-209ENST00000574109 ANP32CO43423 234 aa18.31■□□□□ 0.52
NDE1-209ENST00000574109 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
NDE1-209ENST00000574109 USP21Q9UK80 565 aa18.31■□□□□ 0.52
NDE1-209ENST00000574109 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
NDE1-209ENST00000574109 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
NDE1-209ENST00000574109 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
NDE1-209ENST00000574109 TRPC5Q9UL62 973 aaPredicted RBP18.29■□□□□ 0.52
NDE1-209ENST00000574109 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
NDE1-209ENST00000574109 GLI3P10071 1580 aa18.28■□□□□ 0.52
NDE1-209ENST00000574109 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
NDE1-209ENST00000574109 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
NDE1-209ENST00000574109 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.52
NDE1-209ENST00000574109 EVA1CP58658 441 aa18.27■□□□□ 0.52
NDE1-209ENST00000574109 VPS72Q15906 364 aa18.27■□□□□ 0.52
NDE1-209ENST00000574109 THSD7AQ9UPZ6 1657 aa18.26■□□□□ 0.51
NDE1-209ENST00000574109 MTHFSP49914 203 aa18.26■□□□□ 0.51
NDE1-209ENST00000574109 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
NDE1-209ENST00000574109 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
NDE1-209ENST00000574109 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
NDE1-209ENST00000574109 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
NDE1-209ENST00000574109 FBLN1P23142 703 aa18.25■□□□□ 0.51
NDE1-209ENST00000574109 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
NDE1-209ENST00000574109 STRN4Q9NRL3 753 aa18.24■□□□□ 0.51
NDE1-209ENST00000574109 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
NDE1-209ENST00000574109 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
NDE1-209ENST00000574109 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
NDE1-209ENST00000574109 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
NDE1-209ENST00000574109 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
NDE1-209ENST00000574109 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
NDE1-209ENST00000574109 PKD1L3Q7Z443 1732 aa18.22■□□□□ 0.51
NDE1-209ENST00000574109 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
NDE1-209ENST00000574109 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
NDE1-209ENST00000574109 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
NDE1-209ENST00000574109 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
NDE1-209ENST00000574109 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
NDE1-209ENST00000574109 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
NDE1-209ENST00000574109 CDCA7Q9BWT1 371 aaPredicted RBP18.2■□□□□ 0.5
NDE1-209ENST00000574109 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
NDE1-209ENST00000574109 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
NDE1-209ENST00000574109 IGSF1Q8N6C5 1336 aa18.2■□□□□ 0.5
NDE1-209ENST00000574109 RBM6P78332 1123 aaKnown RBP18.19■□□□□ 0.5
NDE1-209ENST00000574109 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
NDE1-209ENST00000574109 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
NDE1-209ENST00000574109 NUDCQ9Y266 331 aa18.19■□□□□ 0.5
NDE1-209ENST00000574109 KDRP35968 1356 aa18.18■□□□□ 0.5
NDE1-209ENST00000574109 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
NDE1-209ENST00000574109 BARGINQ6ZT62 677 aa18.18■□□□□ 0.5
NDE1-209ENST00000574109 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
NDE1-209ENST00000574109 RGS17Q9UGC6 210 aaPredicted RBP18.17■□□□□ 0.5
NDE1-209ENST00000574109 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
NDE1-209ENST00000574109 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
NDE1-209ENST00000574109 TNS2Q63HR2 1409 aa18.16■□□□□ 0.5
NDE1-209ENST00000574109 IL13P35225 146 aa18.16■□□□□ 0.5
NDE1-209ENST00000574109 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
NDE1-209ENST00000574109 RXRBP28702 533 aa18.15■□□□□ 0.5
NDE1-209ENST00000574109 MEGF6O75095 1541 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 IL2RBP14784 551 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 NBPF6Q5VWK0 638 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 NBPF4Q96M43 638 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 EYA1Q99502 592 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 RGS12O14924 1447 aa18.13■□□□□ 0.49
NDE1-209ENST00000574109 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
NDE1-209ENST00000574109 ONECUT3O60422 494 aaPredicted RBP18.11■□□□□ 0.49
NDE1-209ENST00000574109 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
NDE1-209ENST00000574109 VIRMAQ69YN4 1812 aaKnown RBP18.11■□□□□ 0.49
NDE1-209ENST00000574109 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
NDE1-209ENST00000574109 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
NDE1-209ENST00000574109 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
NDE1-209ENST00000574109 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
NDE1-209ENST00000574109 TATP17735 454 aaPredicted RBP18.09■□□□□ 0.49
NDE1-209ENST00000574109 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
NDE1-209ENST00000574109 MRS2Q9HD23 443 aa18.08■□□□□ 0.48
NDE1-209ENST00000574109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.08■□□□□ 0.48
NDE1-209ENST00000574109 A0A0G2JS52 829 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms