RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 RGPD5Q99666 1765 aa36.6■■■■□ 3.45
NPLOC4-215ENST00000574095 NFAT5O94916 1531 aa36.59■■■■□ 3.45
NPLOC4-215ENST00000574095 EDC4Q6P2E9 1401 aaKnown RBP36.59■■■■□ 3.45
NPLOC4-215ENST00000574095 TOM1L2Q6ZVM7 507 aa36.57■■■■□ 3.44
NPLOC4-215ENST00000574095 TMF1P82094 1093 aa36.56■■■■□ 3.44
NPLOC4-215ENST00000574095 PDE3BQ13370 1112 aa36.56■■■■□ 3.44
NPLOC4-215ENST00000574095 USP54Q70EL1 1684 aa36.55■■■■□ 3.44
NPLOC4-215ENST00000574095 NINLQ9Y2I6 1382 aa36.54■■■■□ 3.44
NPLOC4-215ENST00000574095 RGPD1P0DJD0 1748 aa36.53■■■■□ 3.44
NPLOC4-215ENST00000574095 WDR17Q8IZU2 1322 aa36.53■■■■□ 3.44
NPLOC4-215ENST00000574095 BAG6P46379 1132 aa36.52■■■■□ 3.44
NPLOC4-215ENST00000574095 FAM196AQ6ZSG2 479 aa36.52■■■■□ 3.44
NPLOC4-215ENST00000574095 CCER1Q8TC90 406 aaPredicted RBP36.52■■■■□ 3.44
NPLOC4-215ENST00000574095 PARP4Q9UKK3 1724 aaKnown RBP36.49■■■■□ 3.43
NPLOC4-215ENST00000574095 CSB-PGBD3P0DP91 1061 aa36.49■■■■□ 3.43
NPLOC4-215ENST00000574095 TRIM37O94972 964 aa36.47■■■■□ 3.43
NPLOC4-215ENST00000574095 LTN1O94822 1766 aa36.46■■■■□ 3.43
NPLOC4-215ENST00000574095 EN1Q05925 392 aaPredicted RBP36.46■■■■□ 3.43
NPLOC4-215ENST00000574095 TNS1Q9HBL0 1735 aaKnown RBP36.45■■■■□ 3.43
NPLOC4-215ENST00000574095 OVOS2A0A0J9YW53 1432 aa36.44■■■■□ 3.42
NPLOC4-215ENST00000574095 OVOS2Q6IE36 1432 aa36.44■■■■□ 3.42
NPLOC4-215ENST00000574095 ANKRD36BQ8N2N9 1353 aa36.43■■■■□ 3.42
NPLOC4-215ENST00000574095 CARD10Q9BWT7 1032 aa36.42■■■■□ 3.42
NPLOC4-215ENST00000574095 ABCC6O95255 1503 aa36.42■■■■□ 3.42
NPLOC4-215ENST00000574095 CDCA8Q53HL2 280 aa36.4■■■■□ 3.42
NPLOC4-215ENST00000574095 WNK3Q9BYP7 1800 aa36.4■■■■□ 3.42
NPLOC4-215ENST00000574095 DDB1Q16531 1140 aa36.39■■■■□ 3.42
NPLOC4-215ENST00000574095 LRRC37A3O60309 1634 aa36.38■■■■□ 3.41
NPLOC4-215ENST00000574095 COG3Q96JB2 828 aa36.38■■■■□ 3.41
NPLOC4-215ENST00000574095 APBA3O96018 575 aa36.35■■■■□ 3.41
NPLOC4-215ENST00000574095 CDCA7Q9BWT1 371 aaPredicted RBP36.35■■■■□ 3.41
NPLOC4-215ENST00000574095 DISP2A7MBM2 1401 aa36.34■■■■□ 3.41
NPLOC4-215ENST00000574095 EZH2Q15910 746 aaKnown RBP36.34■■■■□ 3.41
NPLOC4-215ENST00000574095 ERBB3P21860 1342 aa36.34■■■■□ 3.41
NPLOC4-215ENST00000574095 CCDC7Q96M83 1385 aa36.31■■■■□ 3.4
NPLOC4-215ENST00000574095 FBLN1P23142 703 aa36.31■■■■□ 3.4
NPLOC4-215ENST00000574095 ANKRD24Q8TF21 1146 aa36.31■■■■□ 3.4
NPLOC4-215ENST00000574095 NLRP2Q9NX02 1062 aa36.31■■■■□ 3.4
NPLOC4-215ENST00000574095 PEAK1Q9H792 1746 aa36.3■■■■□ 3.4
NPLOC4-215ENST00000574095 OVOS2A0A0G2JMS6 1433 aa36.29■■■■□ 3.4
NPLOC4-215ENST00000574095 FYB1O15117 783 aa36.29■■■■□ 3.4
NPLOC4-215ENST00000574095 IP6K1Q92551 441 aa36.29■■■■□ 3.4
NPLOC4-215ENST00000574095 CAMKK2Q96RR4 588 aa36.29■■■■□ 3.4
NPLOC4-215ENST00000574095 GGNBP2Q9H3C7 697 aa36.29■■■■□ 3.4
NPLOC4-215ENST00000574095 C11orf95C9JLR9 678 aaPredicted RBP36.27■■■■□ 3.4
NPLOC4-215ENST00000574095 MARCH10Q8NA82 808 aaPredicted RBP36.27■■■■□ 3.4
NPLOC4-215ENST00000574095 MYOM1P52179 1685 aa36.26■■■■□ 3.4
NPLOC4-215ENST00000574095 PSDA5PKW4 1024 aaPredicted RBP36.25■■■■□ 3.39
NPLOC4-215ENST00000574095 EXOC5O00471 708 aa36.25■■■■□ 3.39
NPLOC4-215ENST00000574095 SBF2Q86WG5 1849 aa36.24■■■■□ 3.39
NPLOC4-215ENST00000574095 LTV1Q96GA3 475 aaPredicted RBP36.24■■■■□ 3.39
NPLOC4-215ENST00000574095 MAP3K19Q56UN5 1328 aa36.24■■■■□ 3.39
NPLOC4-215ENST00000574095 SRCAPQ6ZRS2 3230 aa36.23■■■■□ 3.39
NPLOC4-215ENST00000574095 CARD14Q9BXL6 1004 aa36.22■■■■□ 3.39
NPLOC4-215ENST00000574095 AMPHP49418 695 aa36.21■■■■□ 3.39
NPLOC4-215ENST00000574095 EIF4G2P78344 907 aaKnown RBP eCLIP36.21■■■■□ 3.39
NPLOC4-215ENST00000574095 KIF20BQ96Q89 1820 aa36.2■■■■□ 3.39
NPLOC4-215ENST00000574095 HOXC9P31274 260 aa36.2■■■■□ 3.39
NPLOC4-215ENST00000574095 POLR3GLQ9BT43 218 aa36.2■■■■□ 3.39
NPLOC4-215ENST00000574095 HSPA5P11021 654 aaKnown RBP36.19■■■■□ 3.38
NPLOC4-215ENST00000574095 PARD3Q8TEW0 1356 aa36.18■■■■□ 3.38
NPLOC4-215ENST00000574095 RRS1Q15050 365 aaKnown RBP36.18■■■■□ 3.38
NPLOC4-215ENST00000574095 IL2RBP14784 551 aa36.17■■■■□ 3.38
NPLOC4-215ENST00000574095 PTF1AQ7RTS3 328 aa36.16■■■■□ 3.38
NPLOC4-215ENST00000574095 TNS2Q63HR2 1409 aa36.16■■■■□ 3.38
NPLOC4-215ENST00000574095 NSD3Q9BZ95 1437 aa36.16■■■■□ 3.38
NPLOC4-215ENST00000574095 R3HDM1Q15032 1099 aaKnown RBP36.15■■■■□ 3.38
NPLOC4-215ENST00000574095 RREB1Q92766 1687 aa36.14■■■■□ 3.38
NPLOC4-215ENST00000574095 BCL11BQ9C0K0 894 aaPredicted RBP36.13■■■■□ 3.37
NPLOC4-215ENST00000574095 BCL9O00512 1426 aa36.12■■■■□ 3.37
NPLOC4-215ENST00000574095 FAM208AQ9UK61 1670 aaKnown RBP36.12■■■■□ 3.37
NPLOC4-215ENST00000574095 RGPD2P0DJD1 1756 aa36.1■■■■□ 3.37
NPLOC4-215ENST00000574095 NUP188Q5SRE5 1749 aa36.09■■■■□ 3.37
NPLOC4-215ENST00000574095 RTL1A6NKG5 1358 aa36.08■■■■□ 3.37
NPLOC4-215ENST00000574095 PLSCR1O15162 318 aa36.06■■■■□ 3.36
NPLOC4-215ENST00000574095 KCNQ2O43526 872 aa36.02■■■■□ 3.36
NPLOC4-215ENST00000574095 NBPF14Q5TI25 921 aa36.02■■■■□ 3.36
NPLOC4-215ENST00000574095 ACSBG1Q96GR2 724 aa36.02■■■■□ 3.36
NPLOC4-215ENST00000574095 HSP90AB2PQ58FF8 381 aa36.01■■■■□ 3.36
NPLOC4-215ENST00000574095 RGPD3A6NKT7 1758 aaPredicted RBP36.01■■■■□ 3.35
NPLOC4-215ENST00000574095 RGPD4Q7Z3J3 1758 aa36.01■■■■□ 3.35
NPLOC4-215ENST00000574095 NBPF6Q5VWK0 638 aa36■■■■□ 3.35
NPLOC4-215ENST00000574095 NBPF4Q96M43 638 aa36■■■■□ 3.35
NPLOC4-215ENST00000574095 CGNL1Q0VF96 1302 aa36■■■■□ 3.35
NPLOC4-215ENST00000574095 DDX54Q8TDD1 881 aaKnown RBP35.98■■■■□ 3.35
NPLOC4-215ENST00000574095 KAT6BQ8WYB5 2073 aa35.97■■■■□ 3.35
NPLOC4-215ENST00000574095 USHBP1Q8N6Y0 703 aa35.97■■■■□ 3.35
NPLOC4-215ENST00000574095 EMILIN1Q9Y6C2 1016 aa35.97■■■■□ 3.35
NPLOC4-215ENST00000574095 FLT4P35916 1363 aa35.97■■■■□ 3.35
NPLOC4-215ENST00000574095 LRP5O75197 1615 aa35.97■■■■□ 3.35
NPLOC4-215ENST00000574095 PROM2Q8N271 834 aa35.96■■■■□ 3.35
NPLOC4-215ENST00000574095 INSRP06213 1382 aa35.96■■■■□ 3.35
NPLOC4-215ENST00000574095 NHSQ6T4R5 1651 aa35.96■■■■□ 3.35
NPLOC4-215ENST00000574095 SMG6Q86US8 1419 aaKnown RBP35.95■■■■□ 3.35
NPLOC4-215ENST00000574095 PANK3Q9H999 370 aa35.95■■■■□ 3.35
NPLOC4-215ENST00000574095 KIF24Q5T7B8 1368 aa35.94■■■■□ 3.34
NPLOC4-215ENST00000574095 PPM1GO15355 546 aaPredicted RBP35.92■■■■□ 3.34
NPLOC4-215ENST00000574095 MEGF6O75095 1541 aa35.92■■■■□ 3.34
NPLOC4-215ENST00000574095 MAP2P11137 1827 aaKnown RBP35.92■■■■□ 3.34
NPLOC4-215ENST00000574095 ZCRB1Q8TBF4 217 aaKnown RBP35.9■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms