RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
EDC4-207ENST00000573992 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
EDC4-207ENST00000573992 ATP2B3Q16720 1220 aa13.78□□□□□ -0.2
EDC4-207ENST00000573992 GPT2Q8TD30 523 aa13.78□□□□□ -0.2
EDC4-207ENST00000573992 KANK1Q14678 1352 aa13.78□□□□□ -0.2
EDC4-207ENST00000573992 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
EDC4-207ENST00000573992 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
EDC4-207ENST00000573992 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
EDC4-207ENST00000573992 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
EDC4-207ENST00000573992 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
EDC4-207ENST00000573992 RNF20Q5VTR2 975 aa13.77□□□□□ -0.2
EDC4-207ENST00000573992 CUL7Q14999 1698 aa13.77□□□□□ -0.21
EDC4-207ENST00000573992 KDM4AO75164 1064 aa13.77□□□□□ -0.21
EDC4-207ENST00000573992 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
EDC4-207ENST00000573992 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
EDC4-207ENST00000573992 GNAI1P63096 354 aa13.77□□□□□ -0.21
EDC4-207ENST00000573992 ZNF428Q96B54 188 aa13.77□□□□□ -0.21
EDC4-207ENST00000573992 PKP1Q13835 747 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 USP48Q86UV5 1035 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 MX1P20591 662 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
EDC4-207ENST00000573992 CCAR2Q8N163 923 aaKnown RBP13.76□□□□□ -0.21
EDC4-207ENST00000573992 GTF2E1P29083 439 aaPredicted RBP13.76□□□□□ -0.21
EDC4-207ENST00000573992 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 AK7Q96M32 723 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
EDC4-207ENST00000573992 CARMIL2Q6F5E8 1435 aa13.76□□□□□ -0.21
EDC4-207ENST00000573992 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
EDC4-207ENST00000573992 KIF18AQ8NI77 898 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 TNMDQ9H2S6 317 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 FKBP5Q13451 457 aaPredicted RBP13.75□□□□□ -0.21
EDC4-207ENST00000573992 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 GIMAP6Q6P9H5 292 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
EDC4-207ENST00000573992 NUP62CLQ9H1M0 184 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 UBE2HP62256 183 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
EDC4-207ENST00000573992 JARID2Q92833 1246 aaPredicted RBP13.75□□□□□ -0.21
EDC4-207ENST00000573992 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
EDC4-207ENST00000573992 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
EDC4-207ENST00000573992 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
EDC4-207ENST00000573992 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
EDC4-207ENST00000573992 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
EDC4-207ENST00000573992 CEP135Q66GS9 1140 aa13.74□□□□□ -0.21
EDC4-207ENST00000573992 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
EDC4-207ENST00000573992 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
EDC4-207ENST00000573992 USP26Q9BXU7 913 aa13.73□□□□□ -0.21
EDC4-207ENST00000573992 POLR3GO15318 223 aaPredicted RBP13.73□□□□□ -0.21
EDC4-207ENST00000573992 LEKR1Q6ZMV7 388 aa13.73□□□□□ -0.21
EDC4-207ENST00000573992 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
EDC4-207ENST00000573992 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
EDC4-207ENST00000573992 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
EDC4-207ENST00000573992 POLR3AO14802 1390 aaPredicted RBP13.73□□□□□ -0.21
EDC4-207ENST00000573992 KIF2AO00139 706 aaPredicted RBP13.72□□□□□ -0.21
EDC4-207ENST00000573992 POLR1AO95602 1720 aaPredicted RBP13.72□□□□□ -0.21
EDC4-207ENST00000573992 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
EDC4-207ENST00000573992 UBXN4Q92575 508 aa13.72□□□□□ -0.21
EDC4-207ENST00000573992 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
EDC4-207ENST00000573992 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
EDC4-207ENST00000573992 CTTNBP2Q8WZ74 1663 aa13.72□□□□□ -0.21
EDC4-207ENST00000573992 MAGI3Q5TCQ9 1506 aa13.72□□□□□ -0.21
EDC4-207ENST00000573992 PTGS1P23219 599 aa13.72□□□□□ -0.21
EDC4-207ENST00000573992 KRT85P78386 507 aa13.72□□□□□ -0.21
EDC4-207ENST00000573992 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
EDC4-207ENST00000573992 TWISTNBQ3B726 338 aaPredicted RBP13.71□□□□□ -0.21
EDC4-207ENST00000573992 CLIP2Q9UDT6 1046 aa13.71□□□□□ -0.21
EDC4-207ENST00000573992 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
EDC4-207ENST00000573992 CCDC141Q6ZP82 1450 aa13.71□□□□□ -0.21
EDC4-207ENST00000573992 CAMK4Q16566 473 aa13.71□□□□□ -0.21
EDC4-207ENST00000573992 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
EDC4-207ENST00000573992 GGNBP2Q9H3C7 697 aa13.71□□□□□ -0.21
EDC4-207ENST00000573992 ABCC11Q96J66 1382 aa13.71□□□□□ -0.22
EDC4-207ENST00000573992 SDSP20132 328 aa13.71□□□□□ -0.22
EDC4-207ENST00000573992 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.22
EDC4-207ENST00000573992 DEF6Q9H4E7 631 aa13.71□□□□□ -0.22
EDC4-207ENST00000573992 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
EDC4-207ENST00000573992 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
EDC4-207ENST00000573992 H3BQV1 296 aa13.7□□□□□ -0.22
EDC4-207ENST00000573992 IFFO2Q5TF58 517 aa13.7□□□□□ -0.22
EDC4-207ENST00000573992 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
EDC4-207ENST00000573992 TRMT1Q9NXH9 659 aaKnown RBP13.7□□□□□ -0.22
EDC4-207ENST00000573992 STK26Q9P289 416 aa13.7□□□□□ -0.22
EDC4-207ENST00000573992 DDIT3P35638 169 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 FAM200AQ8TCP9 573 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 DNMT1P26358 1616 aaKnown RBP13.69□□□□□ -0.22
EDC4-207ENST00000573992 ZKSCAN1P17029 563 aaPredicted RBP13.69□□□□□ -0.22
EDC4-207ENST00000573992 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 GTF2A1P52655 376 aaPredicted RBP13.69□□□□□ -0.22
EDC4-207ENST00000573992 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
EDC4-207ENST00000573992 PDCP20941 246 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 SETQ01105 290 aaPredicted RBP13.68□□□□□ -0.22
EDC4-207ENST00000573992 NEMFO60524 1076 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
EDC4-207ENST00000573992 ZBTB22O15209 634 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
EDC4-207ENST00000573992 HSP90B2PQ58FF3 399 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms