RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 NFAT5O94916 1531 aa20.3■□□□□ 0.84
TVP23A-208ENST00000573857 MON2Q7Z3U7 1717 aa20.29■□□□□ 0.84
TVP23A-208ENST00000573857 CD163L1Q9NR16 1453 aa20.29■□□□□ 0.84
TVP23A-208ENST00000573857 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
TVP23A-208ENST00000573857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
TVP23A-208ENST00000573857 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.84
TVP23A-208ENST00000573857 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
TVP23A-208ENST00000573857 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
TVP23A-208ENST00000573857 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
TVP23A-208ENST00000573857 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
TVP23A-208ENST00000573857 DDB1Q16531 1140 aa20.26■□□□□ 0.83
TVP23A-208ENST00000573857 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
TVP23A-208ENST00000573857 PEAK1Q9H792 1746 aa20.25■□□□□ 0.83
TVP23A-208ENST00000573857 CARD10Q9BWT7 1032 aa20.25■□□□□ 0.83
TVP23A-208ENST00000573857 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
TVP23A-208ENST00000573857 ABCC6O95255 1503 aa20.25■□□□□ 0.83
TVP23A-208ENST00000573857 CSB-PGBD3P0DP91 1061 aa20.24■□□□□ 0.83
TVP23A-208ENST00000573857 HDGFL2Q7Z4V5 671 aaPredicted RBP20.24■□□□□ 0.83
TVP23A-208ENST00000573857 NME9Q86XW9 330 aa20.24■□□□□ 0.83
TVP23A-208ENST00000573857 PUS7Q96PZ0 661 aaKnown RBP20.24■□□□□ 0.83
TVP23A-208ENST00000573857 CDCA7Q9BWT1 371 aaPredicted RBP20.24■□□□□ 0.83
TVP23A-208ENST00000573857 RREB1Q92766 1687 aa20.23■□□□□ 0.83
TVP23A-208ENST00000573857 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
TVP23A-208ENST00000573857 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
TVP23A-208ENST00000573857 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
TVP23A-208ENST00000573857 TERF2IPQ9NYB0 399 aa20.22■□□□□ 0.83
TVP23A-208ENST00000573857 WNK3Q9BYP7 1800 aa20.22■□□□□ 0.83
TVP23A-208ENST00000573857 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
TVP23A-208ENST00000573857 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
TVP23A-208ENST00000573857 TESK2Q96S53 571 aa20.21■□□□□ 0.83
TVP23A-208ENST00000573857 NUP188Q5SRE5 1749 aa20.2■□□□□ 0.82
TVP23A-208ENST00000573857 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
TVP23A-208ENST00000573857 BCL9O00512 1426 aa20.19■□□□□ 0.82
TVP23A-208ENST00000573857 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
TVP23A-208ENST00000573857 CCDC7Q96M83 1385 aa20.19■□□□□ 0.82
TVP23A-208ENST00000573857 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
TVP23A-208ENST00000573857 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
TVP23A-208ENST00000573857 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
TVP23A-208ENST00000573857 ERBB3P21860 1342 aa20.18■□□□□ 0.82
TVP23A-208ENST00000573857 PTF1AQ7RTS3 328 aa20.16■□□□□ 0.82
TVP23A-208ENST00000573857 SBF2Q86WG5 1849 aa20.16■□□□□ 0.82
TVP23A-208ENST00000573857 EXOC5O00471 708 aa20.15■□□□□ 0.82
TVP23A-208ENST00000573857 PLSCR1O15162 318 aa20.15■□□□□ 0.82
TVP23A-208ENST00000573857 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
TVP23A-208ENST00000573857 TNS2Q63HR2 1409 aa20.15■□□□□ 0.82
TVP23A-208ENST00000573857 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
TVP23A-208ENST00000573857 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
TVP23A-208ENST00000573857 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
TVP23A-208ENST00000573857 LTN1O94822 1766 aa20.13■□□□□ 0.81
TVP23A-208ENST00000573857 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
TVP23A-208ENST00000573857 USP47Q96K76 1375 aa20.09■□□□□ 0.81
TVP23A-208ENST00000573857 IL2RBP14784 551 aa20.09■□□□□ 0.81
TVP23A-208ENST00000573857 ANKRD36BQ8N2N9 1353 aa20.08■□□□□ 0.81
TVP23A-208ENST00000573857 PROM2Q8N271 834 aa20.08■□□□□ 0.81
TVP23A-208ENST00000573857 IP6K1Q92551 441 aa20.08■□□□□ 0.81
TVP23A-208ENST00000573857 COG3Q96JB2 828 aa20.08■□□□□ 0.81
TVP23A-208ENST00000573857 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
TVP23A-208ENST00000573857 TMF1P82094 1093 aa20.06■□□□□ 0.8
TVP23A-208ENST00000573857 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
TVP23A-208ENST00000573857 KCNQ2O43526 872 aa20.05■□□□□ 0.8
TVP23A-208ENST00000573857 SPON1Q9HCB6 807 aa20.04■□□□□ 0.8
TVP23A-208ENST00000573857 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
TVP23A-208ENST00000573857 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
TVP23A-208ENST00000573857 NHSQ6T4R5 1651 aa20.03■□□□□ 0.8
TVP23A-208ENST00000573857 FBLN1P23142 703 aa20.02■□□□□ 0.8
TVP23A-208ENST00000573857 HOXC9P31274 260 aa20.02■□□□□ 0.8
TVP23A-208ENST00000573857 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.8
TVP23A-208ENST00000573857 AMPHP49418 695 aa20.01■□□□□ 0.79
TVP23A-208ENST00000573857 FAM208AQ9UK61 1670 aaKnown RBP20■□□□□ 0.79
TVP23A-208ENST00000573857 FYB1O15117 783 aa20■□□□□ 0.79
TVP23A-208ENST00000573857 CDCA8Q53HL2 280 aa20■□□□□ 0.79
TVP23A-208ENST00000573857 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
TVP23A-208ENST00000573857 CASZ1Q86V15 1759 aa19.99■□□□□ 0.79
TVP23A-208ENST00000573857 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
TVP23A-208ENST00000573857 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
TVP23A-208ENST00000573857 GGNBP2Q9H3C7 697 aa19.98■□□□□ 0.79
TVP23A-208ENST00000573857 STK32BQ9NY57 414 aa19.98■□□□□ 0.79
TVP23A-208ENST00000573857 TIMELESSQ9UNS1 1208 aa19.98■□□□□ 0.79
TVP23A-208ENST00000573857 RRS1Q15050 365 aaKnown RBP19.97■□□□□ 0.79
TVP23A-208ENST00000573857 SLC15A2Q16348 729 aa19.96■□□□□ 0.79
TVP23A-208ENST00000573857 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
TVP23A-208ENST00000573857 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
TVP23A-208ENST00000573857 ZBTB7AO95365 584 aa19.94■□□□□ 0.78
TVP23A-208ENST00000573857 BTAF1O14981 1849 aa19.94■□□□□ 0.78
TVP23A-208ENST00000573857 MEGF6O75095 1541 aa19.93■□□□□ 0.78
TVP23A-208ENST00000573857 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
TVP23A-208ENST00000573857 CARD14Q9BXL6 1004 aa19.92■□□□□ 0.78
TVP23A-208ENST00000573857 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
TVP23A-208ENST00000573857 NBPF6Q5VWK0 638 aa19.91■□□□□ 0.78
TVP23A-208ENST00000573857 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
TVP23A-208ENST00000573857 NBPF4Q96M43 638 aa19.91■□□□□ 0.78
TVP23A-208ENST00000573857 SMG6Q86US8 1419 aaKnown RBP19.91■□□□□ 0.78
TVP23A-208ENST00000573857 MYOM1P52179 1685 aa19.91■□□□□ 0.78
TVP23A-208ENST00000573857 PTGER2P43116 358 aa19.9■□□□□ 0.78
TVP23A-208ENST00000573857 LRRC4BQ9NT99 713 aa19.9■□□□□ 0.78
TVP23A-208ENST00000573857 NSD3Q9BZ95 1437 aa19.9■□□□□ 0.78
TVP23A-208ENST00000573857 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
TVP23A-208ENST00000573857 KIF20BQ96Q89 1820 aa19.9■□□□□ 0.78
TVP23A-208ENST00000573857 INSRP06213 1382 aa19.89■□□□□ 0.77
TVP23A-208ENST00000573857 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms