RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 PRIMPOLQ96LW4 560 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 MROH1Q8NDA8 1641 aa12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 NKTRP30414 1462 aaKnown RBP12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 KANK1Q14678 1352 aa12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 GTF2A1P52655 376 aaPredicted RBP12.92□□□□□ -0.34
CHRNB1-205ENST00000573209 XPCQ01831 940 aaPredicted RBP12.91□□□□□ -0.34
CHRNB1-205ENST00000573209 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
CHRNB1-205ENST00000573209 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
CHRNB1-205ENST00000573209 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
CHRNB1-205ENST00000573209 GPATCH11Q8N954 259 aa12.91□□□□□ -0.34
CHRNB1-205ENST00000573209 EFCAB6Q5THR3 1501 aa12.9□□□□□ -0.34
CHRNB1-205ENST00000573209 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
CHRNB1-205ENST00000573209 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
CHRNB1-205ENST00000573209 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
CHRNB1-205ENST00000573209 NASPP49321 788 aaPredicted RBP12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 ERVK-7P63135 1459 aa12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 SLFN5Q08AF3 891 aa12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 OGFRQ9NZT2 677 aa12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
CHRNB1-205ENST00000573209 SHPRHQ149N8 1683 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 ANAPC15P60006 121 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 C20orf194Q5TEA3 1177 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 DIP2BQ9P265 1576 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
CHRNB1-205ENST00000573209 PRDM16Q9HAZ2 1276 aa12.87□□□□□ -0.35
CHRNB1-205ENST00000573209 PPLO60437 1756 aa12.87□□□□□ -0.35
CHRNB1-205ENST00000573209 MLECQ14165 292 aa12.87□□□□□ -0.35
CHRNB1-205ENST00000573209 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
CHRNB1-205ENST00000573209 QRICH2Q9H0J4 1663 aa12.87□□□□□ -0.35
CHRNB1-205ENST00000573209 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 NOP2P46087 812 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-205ENST00000573209 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 ADGRB3O60242 1522 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 FANCAO15360 1455 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 ICE2Q659A1 982 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 RNF217Q8TC41 542 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 SLC26A8Q96RN1 970 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 KIDINS220Q9ULH0 1771 aa12.85□□□□□ -0.35
CHRNB1-205ENST00000573209 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
CHRNB1-205ENST00000573209 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
CHRNB1-205ENST00000573209 DONSONQ9NYP3 566 aa12.84□□□□□ -0.35
CHRNB1-205ENST00000573209 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
CHRNB1-205ENST00000573209 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
CHRNB1-205ENST00000573209 TSPOAP1O95153 1857 aa12.84□□□□□ -0.35
CHRNB1-205ENST00000573209 POLR3AO14802 1390 aaPredicted RBP12.83□□□□□ -0.36
CHRNB1-205ENST00000573209 MAFGO15525 162 aa12.83□□□□□ -0.36
CHRNB1-205ENST00000573209 TERF2IPQ9NYB0 399 aa12.83□□□□□ -0.36
CHRNB1-205ENST00000573209 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
CHRNB1-205ENST00000573209 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
CHRNB1-205ENST00000573209 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 GUCY2CP25092 1073 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 MPNDQ8N594 471 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 RAD50Q92878 1312 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 PDLIM2Q96JY6 352 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 USP19O94966 1318 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 CD109Q6YHK3 1445 aa12.81□□□□□ -0.36
CHRNB1-205ENST00000573209 TERF2Q15554 542 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 ZKSCAN8Q15776 578 aaPredicted RBP12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 PDE3AQ14432 1141 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 RASSF4Q9H2L5 321 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 STK26Q9P289 416 aa12.8□□□□□ -0.36
CHRNB1-205ENST00000573209 APAF1O14727 1248 aa12.79□□□□□ -0.36
CHRNB1-205ENST00000573209 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
CHRNB1-205ENST00000573209 CALRP27797 417 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms