RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TCP11L2Q8N4U5 519 aa24.47■■□□□ 1.51
SMG6-212ENST00000573153 USP35Q9P2H5 1018 aa24.47■■□□□ 1.51
SMG6-212ENST00000573153 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
SMG6-212ENST00000573153 DISP2A7MBM2 1401 aa24.46■■□□□ 1.51
SMG6-212ENST00000573153 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.46■■□□□ 1.51
SMG6-212ENST00000573153 EVA1CP58658 441 aa24.45■■□□□ 1.5
SMG6-212ENST00000573153 KCNH5Q8NCM2 988 aa24.45■■□□□ 1.5
SMG6-212ENST00000573153 TMC1Q8TDI8 760 aa24.45■■□□□ 1.5
SMG6-212ENST00000573153 THRAP3Q9Y2W1 955 aaKnown RBP24.45■■□□□ 1.5
SMG6-212ENST00000573153 MYOM1P52179 1685 aa24.44■■□□□ 1.5
SMG6-212ENST00000573153 WDR17Q8IZU2 1322 aa24.44■■□□□ 1.5
SMG6-212ENST00000573153 LTN1O94822 1766 aa24.43■■□□□ 1.5
SMG6-212ENST00000573153 ZBTB7CA1YPR0 619 aa24.41■■□□□ 1.5
SMG6-212ENST00000573153 SOX12O15370 315 aa24.41■■□□□ 1.5
SMG6-212ENST00000573153 HDGFL2Q7Z4V5 671 aaPredicted RBP24.41■■□□□ 1.5
SMG6-212ENST00000573153 ANKRD36BQ8N2N9 1353 aa24.41■■□□□ 1.5
SMG6-212ENST00000573153 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
SMG6-212ENST00000573153 SLC24A1O60721 1099 aa24.39■■□□□ 1.49
SMG6-212ENST00000573153 SRCAPQ6ZRS2 3230 aa24.37■■□□□ 1.49
SMG6-212ENST00000573153 FAM196AQ6ZSG2 479 aa24.35■■□□□ 1.49
SMG6-212ENST00000573153 ERBB3P21860 1342 aa24.35■■□□□ 1.49
SMG6-212ENST00000573153 TMF1P82094 1093 aa24.34■■□□□ 1.49
SMG6-212ENST00000573153 TOM1L2Q6ZVM7 507 aa24.34■■□□□ 1.49
SMG6-212ENST00000573153 CARD10Q9BWT7 1032 aa24.34■■□□□ 1.49
SMG6-212ENST00000573153 RREB1Q92766 1687 aa24.33■■□□□ 1.49
SMG6-212ENST00000573153 SBF2Q86WG5 1849 aa24.33■■□□□ 1.48
SMG6-212ENST00000573153 BAG6P46379 1132 aa24.32■■□□□ 1.48
SMG6-212ENST00000573153 EN1Q05925 392 aaPredicted RBP24.32■■□□□ 1.48
SMG6-212ENST00000573153 SF3B2Q13435 895 aaKnown RBP24.32■■□□□ 1.48
SMG6-212ENST00000573153 TRIM37O94972 964 aa24.31■■□□□ 1.48
SMG6-212ENST00000573153 BCL9O00512 1426 aa24.3■■□□□ 1.48
SMG6-212ENST00000573153 PDE3BQ13370 1112 aa24.3■■□□□ 1.48
SMG6-212ENST00000573153 CAMKK2Q96RR4 588 aa24.3■■□□□ 1.48
SMG6-212ENST00000573153 OVOS2A0A0G2JMS6 1433 aa24.29■■□□□ 1.48
SMG6-212ENST00000573153 FBLN1P23142 703 aa24.29■■□□□ 1.48
SMG6-212ENST00000573153 CCDC7Q96M83 1385 aa24.29■■□□□ 1.48
SMG6-212ENST00000573153 NUP188Q5SRE5 1749 aa24.27■■□□□ 1.48
SMG6-212ENST00000573153 FYB1O15117 783 aa24.27■■□□□ 1.48
SMG6-212ENST00000573153 EZH2Q15910 746 aaKnown RBP24.27■■□□□ 1.48
SMG6-212ENST00000573153 MARCH10Q8NA82 808 aaPredicted RBP24.27■■□□□ 1.48
SMG6-212ENST00000573153 CARD14Q9BXL6 1004 aa24.27■■□□□ 1.48
SMG6-212ENST00000573153 FAM208AQ9UK61 1670 aaKnown RBP24.27■■□□□ 1.48
SMG6-212ENST00000573153 TNS2Q63HR2 1409 aa24.27■■□□□ 1.48
SMG6-212ENST00000573153 KIF20BQ96Q89 1820 aa24.26■■□□□ 1.47
SMG6-212ENST00000573153 MAP3K19Q56UN5 1328 aa24.26■■□□□ 1.47
SMG6-212ENST00000573153 DDB1Q16531 1140 aa24.25■■□□□ 1.47
SMG6-212ENST00000573153 PTF1AQ7RTS3 328 aa24.25■■□□□ 1.47
SMG6-212ENST00000573153 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
SMG6-212ENST00000573153 IP6K1Q92551 441 aa24.24■■□□□ 1.47
SMG6-212ENST00000573153 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
SMG6-212ENST00000573153 RGPD3A6NKT7 1758 aaPredicted RBP24.24■■□□□ 1.47
SMG6-212ENST00000573153 RGPD4Q7Z3J3 1758 aa24.24■■□□□ 1.47
SMG6-212ENST00000573153 CSB-PGBD3P0DP91 1061 aa24.23■■□□□ 1.47
SMG6-212ENST00000573153 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
SMG6-212ENST00000573153 PARD3Q8TEW0 1356 aa24.22■■□□□ 1.47
SMG6-212ENST00000573153 COG3Q96JB2 828 aa24.22■■□□□ 1.47
SMG6-212ENST00000573153 GGNBP2Q9H3C7 697 aa24.21■■□□□ 1.47
SMG6-212ENST00000573153 LRP5O75197 1615 aa24.21■■□□□ 1.47
SMG6-212ENST00000573153 NSD3Q9BZ95 1437 aa24.2■■□□□ 1.46
SMG6-212ENST00000573153 APBA3O96018 575 aa24.2■■□□□ 1.46
SMG6-212ENST00000573153 CDCA8Q53HL2 280 aa24.2■■□□□ 1.46
SMG6-212ENST00000573153 RGPD2P0DJD1 1756 aa24.2■■□□□ 1.46
SMG6-212ENST00000573153 HOXC9P31274 260 aa24.19■■□□□ 1.46
SMG6-212ENST00000573153 RTL1A6NKG5 1358 aa24.18■■□□□ 1.46
SMG6-212ENST00000573153 PSDA5PKW4 1024 aaPredicted RBP24.17■■□□□ 1.46
SMG6-212ENST00000573153 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
SMG6-212ENST00000573153 SHANK3Q9BYB0 1731 aa24.17■■□□□ 1.46
SMG6-212ENST00000573153 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
SMG6-212ENST00000573153 NHSQ6T4R5 1651 aa24.16■■□□□ 1.46
SMG6-212ENST00000573153 C11orf95C9JLR9 678 aaPredicted RBP24.16■■□□□ 1.46
SMG6-212ENST00000573153 NLRP2Q9NX02 1062 aa24.16■■□□□ 1.46
SMG6-212ENST00000573153 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
SMG6-212ENST00000573153 IL2RBP14784 551 aa24.13■■□□□ 1.45
SMG6-212ENST00000573153 BCL11BQ9C0K0 894 aaPredicted RBP24.13■■□□□ 1.45
SMG6-212ENST00000573153 MEGF6O75095 1541 aa24.13■■□□□ 1.45
SMG6-212ENST00000573153 EXOC5O00471 708 aa24.12■■□□□ 1.45
SMG6-212ENST00000573153 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMG6-212ENST00000573153 PLSCR1O15162 318 aa24.1■■□□□ 1.45
SMG6-212ENST00000573153 R3HDM1Q15032 1099 aaKnown RBP24.1■■□□□ 1.45
SMG6-212ENST00000573153 PROM2Q8N271 834 aa24.1■■□□□ 1.45
SMG6-212ENST00000573153 LTV1Q96GA3 475 aaPredicted RBP24.09■■□□□ 1.45
SMG6-212ENST00000573153 INSRP06213 1382 aa24.08■■□□□ 1.45
SMG6-212ENST00000573153 KIF24Q5T7B8 1368 aa24.08■■□□□ 1.45
SMG6-212ENST00000573153 KCNQ2O43526 872 aa24.08■■□□□ 1.45
SMG6-212ENST00000573153 NCAPD2Q15021 1401 aa24.08■■□□□ 1.44
SMG6-212ENST00000573153 AMPHP49418 695 aa24.07■■□□□ 1.44
SMG6-212ENST00000573153 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
SMG6-212ENST00000573153 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
SMG6-212ENST00000573153 FLT4P35916 1363 aa24.06■■□□□ 1.44
SMG6-212ENST00000573153 HSP90AB2PQ58FF8 381 aa24.06■■□□□ 1.44
SMG6-212ENST00000573153 ANO8Q9HCE9 1232 aaPredicted RBP24.05■■□□□ 1.44
SMG6-212ENST00000573153 EMILIN1Q9Y6C2 1016 aa24.05■■□□□ 1.44
SMG6-212ENST00000573153 PAPPAQ13219 1627 aa24.04■■□□□ 1.44
SMG6-212ENST00000573153 BTAF1O14981 1849 aa24.04■■□□□ 1.44
SMG6-212ENST00000573153 CASZ1Q86V15 1759 aa24.03■■□□□ 1.44
SMG6-212ENST00000573153 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
SMG6-212ENST00000573153 NSD2O96028 1365 aa24.01■■□□□ 1.43
SMG6-212ENST00000573153 USHBP1Q8N6Y0 703 aa24■■□□□ 1.43
SMG6-212ENST00000573153 ACSBG1Q96GR2 724 aa24■■□□□ 1.43
SMG6-212ENST00000573153 DOT1LQ8TEK3 1739 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms