RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 ZBTB7CA1YPR0 619 aa22.56■■□□□ 1.2
NDE1-205ENST00000572756 SOX12O15370 315 aa22.56■■□□□ 1.2
NDE1-205ENST00000572756 BARGINQ6ZT62 677 aa22.55■■□□□ 1.2
NDE1-205ENST00000572756 CRB1P82279 1406 aa22.55■■□□□ 1.2
NDE1-205ENST00000572756 A0A0G2JS52 829 aa22.54■■□□□ 1.2
NDE1-205ENST00000572756 EIF4G2P78344 907 aaKnown RBP eCLIP22.54■■□□□ 1.2
NDE1-205ENST00000572756 MYT1Q01538 1121 aa22.54■■□□□ 1.2
NDE1-205ENST00000572756 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
NDE1-205ENST00000572756 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
NDE1-205ENST00000572756 CCDC125Q86Z20 511 aa22.52■■□□□ 1.2
NDE1-205ENST00000572756 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
NDE1-205ENST00000572756 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
NDE1-205ENST00000572756 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
NDE1-205ENST00000572756 WNK3Q9BYP7 1800 aa22.51■■□□□ 1.19
NDE1-205ENST00000572756 WDR17Q8IZU2 1322 aa22.51■■□□□ 1.19
NDE1-205ENST00000572756 BLMP54132 1417 aaPredicted RBP22.5■■□□□ 1.19
NDE1-205ENST00000572756 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
NDE1-205ENST00000572756 FYB1O15117 783 aa22.47■■□□□ 1.19
NDE1-205ENST00000572756 COG3Q96JB2 828 aa22.47■■□□□ 1.19
NDE1-205ENST00000572756 TOM1L2Q6ZVM7 507 aa22.46■■□□□ 1.19
NDE1-205ENST00000572756 CARD14Q9BXL6 1004 aa22.46■■□□□ 1.19
NDE1-205ENST00000572756 LRRC37A3O60309 1634 aa22.44■■□□□ 1.18
NDE1-205ENST00000572756 FAM182BQ5T319 152 aa22.44■■□□□ 1.18
NDE1-205ENST00000572756 RGPD1P0DJD0 1748 aa22.43■■□□□ 1.18
NDE1-205ENST00000572756 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
NDE1-205ENST00000572756 ERBB3P21860 1342 aa22.43■■□□□ 1.18
NDE1-205ENST00000572756 CARD10Q9BWT7 1032 aa22.43■■□□□ 1.18
NDE1-205ENST00000572756 GGNBP2Q9H3C7 697 aa22.42■■□□□ 1.18
NDE1-205ENST00000572756 DISP2A7MBM2 1401 aa22.41■■□□□ 1.18
NDE1-205ENST00000572756 TNS1Q9HBL0 1735 aaKnown RBP22.41■■□□□ 1.18
NDE1-205ENST00000572756 MAP3K19Q56UN5 1328 aa22.4■■□□□ 1.18
NDE1-205ENST00000572756 CSB-PGBD3P0DP91 1061 aa22.4■■□□□ 1.18
NDE1-205ENST00000572756 IP6K1Q92551 441 aa22.4■■□□□ 1.18
NDE1-205ENST00000572756 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
NDE1-205ENST00000572756 CCDC7Q96M83 1385 aa22.39■■□□□ 1.18
NDE1-205ENST00000572756 C11orf95C9JLR9 678 aaPredicted RBP22.39■■□□□ 1.17
NDE1-205ENST00000572756 FBLN1P23142 703 aa22.39■■□□□ 1.17
NDE1-205ENST00000572756 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.17
NDE1-205ENST00000572756 PDE3BQ13370 1112 aa22.38■■□□□ 1.17
NDE1-205ENST00000572756 FAM196AQ6ZSG2 479 aa22.38■■□□□ 1.17
NDE1-205ENST00000572756 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
NDE1-205ENST00000572756 DEFB132Q7Z7B7 95 aa22.37■■□□□ 1.17
NDE1-205ENST00000572756 ANKRD24Q8TF21 1146 aa22.37■■□□□ 1.17
NDE1-205ENST00000572756 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
NDE1-205ENST00000572756 CDCA7Q9BWT1 371 aaPredicted RBP22.37■■□□□ 1.17
NDE1-205ENST00000572756 RTL1A6NKG5 1358 aa22.36■■□□□ 1.17
NDE1-205ENST00000572756 HOXC9P31274 260 aa22.35■■□□□ 1.17
NDE1-205ENST00000572756 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
NDE1-205ENST00000572756 DDB1Q16531 1140 aa22.34■■□□□ 1.17
NDE1-205ENST00000572756 SBF2Q86WG5 1849 aa22.34■■□□□ 1.17
NDE1-205ENST00000572756 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
NDE1-205ENST00000572756 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.17
NDE1-205ENST00000572756 RGPD2P0DJD1 1756 aa22.33■■□□□ 1.16
NDE1-205ENST00000572756 CGNL1Q0VF96 1302 aa22.32■■□□□ 1.16
NDE1-205ENST00000572756 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
NDE1-205ENST00000572756 AMPHP49418 695 aa22.32■■□□□ 1.16
NDE1-205ENST00000572756 BAG6P46379 1132 aa22.31■■□□□ 1.16
NDE1-205ENST00000572756 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
NDE1-205ENST00000572756 TRIM37O94972 964 aa22.3■■□□□ 1.16
NDE1-205ENST00000572756 PANK3Q9H999 370 aa22.3■■□□□ 1.16
NDE1-205ENST00000572756 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
NDE1-205ENST00000572756 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
NDE1-205ENST00000572756 BCL9O00512 1426 aa22.29■■□□□ 1.16
NDE1-205ENST00000572756 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
NDE1-205ENST00000572756 KIF7Q2M1P5 1343 aa22.29■■□□□ 1.16
NDE1-205ENST00000572756 LTV1Q96GA3 475 aaPredicted RBP22.28■■□□□ 1.16
NDE1-205ENST00000572756 IL2RBP14784 551 aa22.27■■□□□ 1.16
NDE1-205ENST00000572756 INSRP06213 1382 aa22.26■■□□□ 1.15
NDE1-205ENST00000572756 FLT4P35916 1363 aa22.26■■□□□ 1.15
NDE1-205ENST00000572756 EXOC5O00471 708 aa22.26■■□□□ 1.15
NDE1-205ENST00000572756 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
NDE1-205ENST00000572756 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
NDE1-205ENST00000572756 HSP90AB2PQ58FF8 381 aa22.23■■□□□ 1.15
NDE1-205ENST00000572756 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
NDE1-205ENST00000572756 RREB1Q92766 1687 aa22.23■■□□□ 1.15
NDE1-205ENST00000572756 NSD2O96028 1365 aa22.23■■□□□ 1.15
NDE1-205ENST00000572756 APBA3O96018 575 aa22.22■■□□□ 1.15
NDE1-205ENST00000572756 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
NDE1-205ENST00000572756 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
NDE1-205ENST00000572756 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
NDE1-205ENST00000572756 NBPF6Q5VWK0 638 aa22.21■■□□□ 1.15
NDE1-205ENST00000572756 NBPF4Q96M43 638 aa22.21■■□□□ 1.15
NDE1-205ENST00000572756 PARD3Q8TEW0 1356 aa22.21■■□□□ 1.15
NDE1-205ENST00000572756 SHANK3Q9BYB0 1731 aa22.2■■□□□ 1.14
NDE1-205ENST00000572756 EZH2Q15910 746 aaKnown RBP22.2■■□□□ 1.14
NDE1-205ENST00000572756 POLKQ9UBT6 870 aa22.19■■□□□ 1.14
NDE1-205ENST00000572756 MEGF6O75095 1541 aa22.19■■□□□ 1.14
NDE1-205ENST00000572756 NUP188Q5SRE5 1749 aa22.18■■□□□ 1.14
NDE1-205ENST00000572756 NHSQ6T4R5 1651 aa22.18■■□□□ 1.14
NDE1-205ENST00000572756 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
NDE1-205ENST00000572756 PTF1AQ7RTS3 328 aa22.18■■□□□ 1.14
NDE1-205ENST00000572756 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
NDE1-205ENST00000572756 NCAPD2Q15021 1401 aa22.17■■□□□ 1.14
NDE1-205ENST00000572756 KNSTRNQ9Y448 316 aa22.16■■□□□ 1.14
NDE1-205ENST00000572756 AMER1Q5JTC6 1135 aaPredicted RBP22.15■■□□□ 1.14
NDE1-205ENST00000572756 USHBP1Q8N6Y0 703 aa22.15■■□□□ 1.14
NDE1-205ENST00000572756 PPM1GO15355 546 aaPredicted RBP22.14■■□□□ 1.13
NDE1-205ENST00000572756 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
NDE1-205ENST00000572756 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
NDE1-205ENST00000572756 PLSCR1O15162 318 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms