RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 NUP188Q5SRE5 1749 aa14.15□□□□□ -0.14
TRAPPC1-205ENST00000572656 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
TRAPPC1-205ENST00000572656 TTC21AQ8NDW8 1320 aa14.15□□□□□ -0.15
TRAPPC1-205ENST00000572656 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
TRAPPC1-205ENST00000572656 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
TRAPPC1-205ENST00000572656 PPP1R1BQ9UD71 204 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC1-205ENST00000572656 BCL9O00512 1426 aa14.14□□□□□ -0.15
TRAPPC1-205ENST00000572656 PEAK1Q9H792 1746 aa14.13□□□□□ -0.15
TRAPPC1-205ENST00000572656 CSB-PGBD3P0DP91 1061 aa14.13□□□□□ -0.15
TRAPPC1-205ENST00000572656 PTF1AQ7RTS3 328 aa14.13□□□□□ -0.15
TRAPPC1-205ENST00000572656 PIK3C2AO00443 1686 aa14.13□□□□□ -0.15
TRAPPC1-205ENST00000572656 SOX12O15370 315 aa14.12□□□□□ -0.15
TRAPPC1-205ENST00000572656 LRRC37A3O60309 1634 aa14.12□□□□□ -0.15
TRAPPC1-205ENST00000572656 KTN1Q86UP2 1357 aaKnown RBP14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 EXOC5O00471 708 aa14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 NEUROD1Q13562 356 aa14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 PROM2Q8N271 834 aa14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 COL18A1P39060 1754 aa14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 TRPM1Q7Z4N2 1603 aa14.11□□□□□ -0.15
TRAPPC1-205ENST00000572656 NINLQ9Y2I6 1382 aa14.1□□□□□ -0.15
TRAPPC1-205ENST00000572656 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
TRAPPC1-205ENST00000572656 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
TRAPPC1-205ENST00000572656 YY1P25490 414 aa14.09□□□□□ -0.15
TRAPPC1-205ENST00000572656 NFAT5O94916 1531 aa14.08□□□□□ -0.16
TRAPPC1-205ENST00000572656 RGPD3A6NKT7 1758 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 RGPD4Q7Z3J3 1758 aa14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 TXNRD1Q16881 649 aa14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 PDGFDQ9GZP0 370 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 USP31Q70CQ4 1352 aa14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 SBNO2Q9Y2G9 1366 aa14.07□□□□□ -0.16
TRAPPC1-205ENST00000572656 ABCC6O95255 1503 aa14.06□□□□□ -0.16
TRAPPC1-205ENST00000572656 STK32BQ9NY57 414 aa14.06□□□□□ -0.16
TRAPPC1-205ENST00000572656 ZBTB7AO95365 584 aa14.05□□□□□ -0.16
TRAPPC1-205ENST00000572656 SLC15A2Q16348 729 aa14.05□□□□□ -0.16
TRAPPC1-205ENST00000572656 NME9Q86XW9 330 aa14.04□□□□□ -0.16
TRAPPC1-205ENST00000572656 CARD11Q9BXL7 1154 aa14.04□□□□□ -0.16
TRAPPC1-205ENST00000572656 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
TRAPPC1-205ENST00000572656 ERBB3P21860 1342 aa14.04□□□□□ -0.16
TRAPPC1-205ENST00000572656 TNS2Q63HR2 1409 aa14.04□□□□□ -0.16
TRAPPC1-205ENST00000572656 PTGER2P43116 358 aa14.03□□□□□ -0.16
TRAPPC1-205ENST00000572656 HDGFL2Q7Z4V5 671 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC1-205ENST00000572656 TMC1Q8TDI8 760 aa14.03□□□□□ -0.16
TRAPPC1-205ENST00000572656 AKAP12Q02952 1782 aa14.03□□□□□ -0.16
TRAPPC1-205ENST00000572656 CD163L1Q9NR16 1453 aa14.02□□□□□ -0.16
TRAPPC1-205ENST00000572656 IL2RBP14784 551 aa14.02□□□□□ -0.17
TRAPPC1-205ENST00000572656 SLC12A5Q9H2X9 1139 aa14.02□□□□□ -0.17
TRAPPC1-205ENST00000572656 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC1-205ENST00000572656 SBF2Q86WG5 1849 aa14.01□□□□□ -0.17
TRAPPC1-205ENST00000572656 WNK3Q9BYP7 1800 aa14.01□□□□□ -0.17
TRAPPC1-205ENST00000572656 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
TRAPPC1-205ENST00000572656 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
TRAPPC1-205ENST00000572656 ACSBG1Q96GR2 724 aa14.01□□□□□ -0.17
TRAPPC1-205ENST00000572656 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
TRAPPC1-205ENST00000572656 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
TRAPPC1-205ENST00000572656 PUS7Q96PZ0 661 aaKnown RBP14□□□□□ -0.17
TRAPPC1-205ENST00000572656 MTFR1LQ9H019 292 aa14□□□□□ -0.17
TRAPPC1-205ENST00000572656 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
TRAPPC1-205ENST00000572656 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
TRAPPC1-205ENST00000572656 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
TRAPPC1-205ENST00000572656 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
TRAPPC1-205ENST00000572656 IP6K1Q92551 441 aa13.97□□□□□ -0.17
TRAPPC1-205ENST00000572656 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC1-205ENST00000572656 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
TRAPPC1-205ENST00000572656 A0A1W2PP64 1363 aa13.96□□□□□ -0.17
TRAPPC1-205ENST00000572656 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
TRAPPC1-205ENST00000572656 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
TRAPPC1-205ENST00000572656 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
TRAPPC1-205ENST00000572656 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-205ENST00000572656 ARXQ96QS3 562 aa13.94□□□□□ -0.18
TRAPPC1-205ENST00000572656 LRRC4BQ9NT99 713 aa13.94□□□□□ -0.18
TRAPPC1-205ENST00000572656 MYOM1P52179 1685 aa13.94□□□□□ -0.18
TRAPPC1-205ENST00000572656 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
TRAPPC1-205ENST00000572656 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-205ENST00000572656 COG3Q96JB2 828 aa13.93□□□□□ -0.18
TRAPPC1-205ENST00000572656 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
TRAPPC1-205ENST00000572656 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
TRAPPC1-205ENST00000572656 TESK2Q96S53 571 aa13.92□□□□□ -0.18
TRAPPC1-205ENST00000572656 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 ST20-MTHFSA0A0A6YYL1 179 aa13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 HOXC9P31274 260 aa13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 ZNF784Q8NCA9 323 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 MAP3K5Q99683 1374 aa13.91□□□□□ -0.18
TRAPPC1-205ENST00000572656 AMPHP49418 695 aa13.9□□□□□ -0.18
TRAPPC1-205ENST00000572656 LTN1O94822 1766 aa13.89□□□□□ -0.19
TRAPPC1-205ENST00000572656 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
TRAPPC1-205ENST00000572656 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
TRAPPC1-205ENST00000572656 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC1-205ENST00000572656 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
TRAPPC1-205ENST00000572656 FBLN1P23142 703 aa13.88□□□□□ -0.19
TRAPPC1-205ENST00000572656 POLD1P28340 1107 aa13.87□□□□□ -0.19
TRAPPC1-205ENST00000572656 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
TRAPPC1-205ENST00000572656 BTAF1O14981 1849 aa13.87□□□□□ -0.19
TRAPPC1-205ENST00000572656 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
TRAPPC1-205ENST00000572656 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
TRAPPC1-205ENST00000572656 KCNQ4P56696 695 aa13.86□□□□□ -0.19
TRAPPC1-205ENST00000572656 NSD2O96028 1365 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms