RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 SLC12A5Q9H2X9 1139 aa24.49■■□□□ 1.51
LITAF-211ENST00000572255 TOM1L2Q6ZVM7 507 aa24.48■■□□□ 1.51
LITAF-211ENST00000572255 USP31Q70CQ4 1352 aa24.48■■□□□ 1.51
LITAF-211ENST00000572255 WDR17Q8IZU2 1322 aa24.48■■□□□ 1.51
LITAF-211ENST00000572255 PUS7Q96PZ0 661 aaKnown RBP24.48■■□□□ 1.51
LITAF-211ENST00000572255 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
LITAF-211ENST00000572255 TESK2Q96S53 571 aa24.47■■□□□ 1.51
LITAF-211ENST00000572255 WNK3Q9BYP7 1800 aa24.47■■□□□ 1.51
LITAF-211ENST00000572255 EDC4Q6P2E9 1401 aaKnown RBP24.46■■□□□ 1.51
LITAF-211ENST00000572255 NME9Q86XW9 330 aa24.46■■□□□ 1.51
LITAF-211ENST00000572255 LRRC37A3O60309 1634 aa24.46■■□□□ 1.51
LITAF-211ENST00000572255 TERF2IPQ9NYB0 399 aa24.45■■□□□ 1.5
LITAF-211ENST00000572255 ABCC6O95255 1503 aa24.45■■□□□ 1.5
LITAF-211ENST00000572255 A0A1W2PP64 1363 aa24.44■■□□□ 1.5
LITAF-211ENST00000572255 EZH2Q15910 746 aaKnown RBP24.43■■□□□ 1.5
LITAF-211ENST00000572255 PSDA5PKW4 1024 aaPredicted RBP24.42■■□□□ 1.5
LITAF-211ENST00000572255 APBA3O96018 575 aa24.42■■□□□ 1.5
LITAF-211ENST00000572255 PEAK1Q9H792 1746 aa24.41■■□□□ 1.5
LITAF-211ENST00000572255 CSB-PGBD3P0DP91 1061 aa24.41■■□□□ 1.5
LITAF-211ENST00000572255 CAMKK2Q96RR4 588 aa24.41■■□□□ 1.5
LITAF-211ENST00000572255 LTN1O94822 1766 aa24.41■■□□□ 1.5
LITAF-211ENST00000572255 NINLQ9Y2I6 1382 aa24.41■■□□□ 1.5
LITAF-211ENST00000572255 SLC24A1O60721 1099 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 DDB1Q16531 1140 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 CARD10Q9BWT7 1032 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 OVOS2A0A0G2JMS6 1433 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 OVOS2A0A0J9YW53 1432 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 OVOS2Q6IE36 1432 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 PARD3Q8TEW0 1356 aa24.4■■□□□ 1.5
LITAF-211ENST00000572255 C11orf95C9JLR9 678 aaPredicted RBP24.38■■□□□ 1.49
LITAF-211ENST00000572255 CDCA7Q9BWT1 371 aaPredicted RBP24.38■■□□□ 1.49
LITAF-211ENST00000572255 USP47Q96K76 1375 aa24.38■■□□□ 1.49
LITAF-211ENST00000572255 RREB1Q92766 1687 aa24.37■■□□□ 1.49
LITAF-211ENST00000572255 LRP5O75197 1615 aa24.37■■□□□ 1.49
LITAF-211ENST00000572255 SBF2Q86WG5 1849 aa24.36■■□□□ 1.49
LITAF-211ENST00000572255 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
LITAF-211ENST00000572255 R3HDM1Q15032 1099 aaKnown RBP24.34■■□□□ 1.49
LITAF-211ENST00000572255 NUP188Q5SRE5 1749 aa24.33■■□□□ 1.49
LITAF-211ENST00000572255 ERBB3P21860 1342 aa24.33■■□□□ 1.48
LITAF-211ENST00000572255 TMF1P82094 1093 aa24.32■■□□□ 1.48
LITAF-211ENST00000572255 MARCH10Q8NA82 808 aaPredicted RBP24.32■■□□□ 1.48
LITAF-211ENST00000572255 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
LITAF-211ENST00000572255 ANKRD36BQ8N2N9 1353 aa24.3■■□□□ 1.48
LITAF-211ENST00000572255 TIMELESSQ9UNS1 1208 aa24.3■■□□□ 1.48
LITAF-211ENST00000572255 CLSPNQ9HAW4 1339 aa24.3■■□□□ 1.48
LITAF-211ENST00000572255 NLRP2Q9NX02 1062 aa24.29■■□□□ 1.48
LITAF-211ENST00000572255 BCL9O00512 1426 aa24.28■■□□□ 1.48
LITAF-211ENST00000572255 TNS2Q63HR2 1409 aa24.28■■□□□ 1.48
LITAF-211ENST00000572255 EXOC5O00471 708 aa24.28■■□□□ 1.48
LITAF-211ENST00000572255 ANKRD24Q8TF21 1146 aa24.28■■□□□ 1.48
LITAF-211ENST00000572255 RGPD3A6NKT7 1758 aaPredicted RBP24.28■■□□□ 1.48
LITAF-211ENST00000572255 RGPD4Q7Z3J3 1758 aa24.28■■□□□ 1.48
LITAF-211ENST00000572255 COG3Q96JB2 828 aa24.27■■□□□ 1.48
LITAF-211ENST00000572255 BCL11BQ9C0K0 894 aaPredicted RBP24.26■■□□□ 1.47
LITAF-211ENST00000572255 PTF1AQ7RTS3 328 aa24.25■■□□□ 1.47
LITAF-211ENST00000572255 IP6K1Q92551 441 aa24.25■■□□□ 1.47
LITAF-211ENST00000572255 CDCA8Q53HL2 280 aa24.23■■□□□ 1.47
LITAF-211ENST00000572255 NBPF14Q5TI25 921 aa24.23■■□□□ 1.47
LITAF-211ENST00000572255 FAM208AQ9UK61 1670 aaKnown RBP24.23■■□□□ 1.47
LITAF-211ENST00000572255 PLSCR1O15162 318 aa24.22■■□□□ 1.47
LITAF-211ENST00000572255 IL2RBP14784 551 aa24.22■■□□□ 1.47
LITAF-211ENST00000572255 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
LITAF-211ENST00000572255 MYOM1P52179 1685 aa24.19■■□□□ 1.46
LITAF-211ENST00000572255 FYB1O15117 783 aa24.19■■□□□ 1.46
LITAF-211ENST00000572255 FBLN1P23142 703 aa24.19■■□□□ 1.46
LITAF-211ENST00000572255 LTV1Q96GA3 475 aaPredicted RBP24.19■■□□□ 1.46
LITAF-211ENST00000572255 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
LITAF-211ENST00000572255 GGNBP2Q9H3C7 697 aa24.18■■□□□ 1.46
LITAF-211ENST00000572255 NHSQ6T4R5 1651 aa24.18■■□□□ 1.46
LITAF-211ENST00000572255 HOXC9P31274 260 aa24.17■■□□□ 1.46
LITAF-211ENST00000572255 AMPHP49418 695 aa24.17■■□□□ 1.46
LITAF-211ENST00000572255 RTL1A6NKG5 1358 aa24.15■■□□□ 1.46
LITAF-211ENST00000572255 RGPD2P0DJD1 1756 aa24.14■■□□□ 1.46
LITAF-211ENST00000572255 KCNQ2O43526 872 aa24.14■■□□□ 1.45
LITAF-211ENST00000572255 RRS1Q15050 365 aaKnown RBP24.13■■□□□ 1.45
LITAF-211ENST00000572255 PROM2Q8N271 834 aa24.13■■□□□ 1.45
LITAF-211ENST00000572255 ACSBG1Q96GR2 724 aa24.12■■□□□ 1.45
LITAF-211ENST00000572255 ANO8Q9HCE9 1232 aaPredicted RBP24.12■■□□□ 1.45
LITAF-211ENST00000572255 CARD14Q9BXL6 1004 aa24.11■■□□□ 1.45
LITAF-211ENST00000572255 NSD3Q9BZ95 1437 aa24.1■■□□□ 1.45
LITAF-211ENST00000572255 KAT6BQ8WYB5 2073 aa24.09■■□□□ 1.45
LITAF-211ENST00000572255 TXNRD1Q16881 649 aa24.09■■□□□ 1.45
LITAF-211ENST00000572255 CCER1Q8TC90 406 aaPredicted RBP24.09■■□□□ 1.45
LITAF-211ENST00000572255 BTAF1O14981 1849 aa24.09■■□□□ 1.45
LITAF-211ENST00000572255 DDX54Q8TDD1 881 aaKnown RBP24.07■■□□□ 1.44
LITAF-211ENST00000572255 CASZ1Q86V15 1759 aa24.06■■□□□ 1.44
LITAF-211ENST00000572255 MEGF6O75095 1541 aa24.05■■□□□ 1.44
LITAF-211ENST00000572255 SHANK3Q9BYB0 1731 aa24.05■■□□□ 1.44
LITAF-211ENST00000572255 SMG6Q86US8 1419 aaKnown RBP24.05■■□□□ 1.44
LITAF-211ENST00000572255 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
LITAF-211ENST00000572255 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
LITAF-211ENST00000572255 SPON1Q9HCB6 807 aa24.04■■□□□ 1.44
LITAF-211ENST00000572255 INSRP06213 1382 aa24.03■■□□□ 1.44
LITAF-211ENST00000572255 FLT4P35916 1363 aa24.03■■□□□ 1.44
LITAF-211ENST00000572255 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
LITAF-211ENST00000572255 HSP90AB2PQ58FF8 381 aa24.02■■□□□ 1.44
LITAF-211ENST00000572255 ZCRB1Q8TBF4 217 aaKnown RBP24.02■■□□□ 1.44
LITAF-211ENST00000572255 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
LITAF-211ENST00000572255 STK32BQ9NY57 414 aa24.02■■□□□ 1.44
LITAF-211ENST00000572255 EIF4G2P78344 907 aaKnown RBP eCLIP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms